Factsheet for Os02t0730100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
peroxisome 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus, peroxisome
PProwler:	secretory
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0141600-01	Rice	nucleus	63.27	19.21
Solyc08g078430.2.1	Tomato	nucleus	60.54	18.43
PGSC0003DMT400012169	Potato	nucleus	60.54	18.43
KRG94405	Soybean	nucleus	60.54	18.31
KXG30826	Sorghum	nucleus	54.42	18.31
KRH07033	Soybean	nucleus	59.86	18.11
Os04t0555400-01	Rice	nucleus	59.18	17.98
GSMUA_Achr3P06150_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.18	17.68
GSMUA_Achr9P14550_001	Banana	plasma membrane	52.38	17.62
VIT_01s0026g00230.t01	Wine grape	cytosol	59.86	17.29
CDY36542	Canola	nucleus	48.98	17.18
PGSC0003DMT400049589	Potato	cytosol, nucleus, plastid	51.7	16.52
AT1G60170.1	Thale cress	nucleus	52.38	15.88
CDY39628	Canola	nucleus	48.98	15.79
Solyc07g064070.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus	48.3	15.67
CDY04340	Canola	plasma membrane	50.34	15.58
CDY72546	Canola	nucleus	44.22	15.48
Bra031522.1-P	Field mustard	nucleus	51.02	15.43
CDY24519	Canola	nucleus	50.34	15.23
CDY54131	Canola	mitochondrion	50.34	14.98
Bra026149.1-P	Field mustard	nucleus	48.98	14.88
PGSC0003DMT400000083	Potato	cytosol, nucleus, plasma membrane	44.22	14.25
AT1G70400.3	Thale cress	cytosol	6.8	3.65
Os03t0352300-01	Rice	nucleus	7.48	1.99
Os03t0350300-01	Rice	nucleus	6.8	1.76
Os03t0350100-02	Rice	nucleus	5.44	1.41
Os07t0661800-01	Rice	nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A0P0VPC8	ProteinID:BAS80738.1	GO:GO:0000244	GO:GO:0000398	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0046540	EnsemblPlantsGene:Os02g0730100	EnsemblPlants:Os02t0730100-00	PFAM:PF09785
PANTHER:PTHR13904	PANTHER:PTHR13904:SF0	InterPro:Prp31	InterPro:Prp31_C	UniParc:UPI000393BE24	SEG:seg

Description

Similar to Pre-mRNA processing ribonucleoprotein, binding region; NOSIC. (Os02t0730100-00)

Coordinates

chr2:-:30398551..30399887

Molecular Weight (calculated)

15708.8 Da

IEP (calculated)

9.577

GRAVY (calculated)

-0.188

Length

147 amino acids

Sequence
(BLAST)

001: LCYLFVLSGN LICRYAQTDM MKLANRMQFG VPEESSLGDG LGKGYGLLGQ AGSGKLRLLA GQSRLAAKVA KRFKARSCDR SESRSGLTST LAFTPVQGME
101: LSNPLVHNDH SVSGTQSTYF SDVGTFSSIR GKDAIPIQSS EIQNPGV

Best Arabidopsis Sequence Match ( AT1G60170.1 )
(BLAST)

001: MATLEDSFLA DLDELSDNEA ELDENDGDVG KEEEDVDMDM ADLETLNYDD LDNVSKLQKS QRYADIMHKV EEALGKDSDG AEKGTVLEDD PEYKLIVDCN
101: QLSVDIENEI VIVHNFIKDK YKLKFQELES LVHHPIDYAC VVKKIGNETD LALVDLADLL PSAIIMVVSV TALTTKGSAL PEDVLQKVLE ACDRALDLDS
201: ARKKVLEFVE SKMGSIAPNL SAIVGSAVAA KLMGTAGGLS ALAKMPACNV QVLGHKRKNL AGFSSATSQS RVGYLEQTEI YQSTPPGLQA RAGRLVAAKS
301: TLAARVDATR GDPLGISGKA FREEIRKKIE KWQEPPPARQ PKPLPVPDSE PKKRRGGRRL RKMKERYQVT DMRKLANRMA FGTPEESSLG DGLGEGYGML
401: GQAGSNRLRV SSVPSKLKIN AKVAKKLKER QYAGGATTSG LTSSLAFTPV QGIELCNPQQ ALGLGSGTQS TYFSESGTFS KLKKI

Arabidopsis Description

PRP31Emb1220 [Source:UniProtKB/TrEMBL;Acc:A0A178WCJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.