Factsheet for Os03t0350300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 18203134
nucleus: 19621931
nucleus: 23777608
golgi: 25047511
nucleus: 26035336

msms PMID: 18203134 doi

G Li, BR Nallamilli, F Tan, Z Peng

Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0350100-02	Rice	nucleus	97.18	97.18
Zm00001d038818_P001	Maize	cytosol	48.42	95.16
Zm00001d034259_P001	Maize	cytosol	23.24	89.8
Zm00001d047481_P003	Maize	plastid	88.2	89.15
KXG39385	Sorghum	cytosol	88.91	88.75
KXG34017	Sorghum	cytosol	88.38	88.38
Zm00001d029144_P004	Maize	cytosol	87.32	87.94
Zm00001d007484_P001	Maize	cytosol	52.99	87.76
HORVU4Hr1G041810.4	Barley	cytosol	83.1	86.92
TraesCS2D01G120400.1	Wheat	nucleus	85.04	86.25
TraesCS1B01G379200.1	Wheat	cytosol	84.68	85.89
TraesCS4A01G141500.1	Wheat	nucleus	85.56	84.08
Zm00001d011996_P002	Maize	cytosol	45.6	83.82
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	85.04	79.57
Solyc05g055880.2.1	Tomato	nucleus	71.13	78.75
GSMUA_Achr8P09940_001	Banana	cytosol	79.93	77.21
GSMUA_Achr11P...	Banana	cytosol	78.7	76.41
PGSC0003DMT400060016	Potato	cytosol	72.36	75.97
PGSC0003DMT400015638	Potato	cytosol	72.71	75.36
Solyc09g083080.2.1	Tomato	nucleus	72.36	74.46
KRH29399	Soybean	nucleus	72.01	74.23
VIT_14s0030g01270.t01	Wine grape	nucleus	74.82	74.17
CDX80674	Canola	cytosol	69.72	73.88
CDY19706	Canola	nucleus	69.19	73.46
KRH24415	Soybean	nucleus	71.65	73.2
CDY00004	Canola	nucleus	69.01	73.13
AT3G05060.1	Thale cress	cytosol	68.31	72.8
Bra036111.1-P	Field mustard	nucleus	68.66	72.76
CDX86179	Canola	nucleus	68.66	72.63
Bra009978.1-P	Field mustard	nucleus	68.66	72.63
AT5G27120.1	Thale cress	cytosol	67.25	71.67
CDY52494	Canola	nucleus	66.37	71.0
Bra020601.1-P	Field mustard	nucleus	60.39	70.29
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	63.91	69.14
AT5G27140.2	Thale cress	cytosol	49.12	62.0
Zm00001d031027_P001	Maize	plastid	59.86	57.53
Zm00001d036776_P001	Maize	mitochondrion	59.33	54.8
Os03t0352300-01	Rice	nucleus	39.08	40.22
Os07t0661800-01	Rice	nucleus	21.48	38.98
Os07t0141600-01	Rice	nucleus	16.73	19.63
Os04t0555400-01	Rice	nucleus	16.37	19.21
Os02t0730100-00	Rice	extracellular	1.76	6.8

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:17.1.1.2.1.5.3	EntrezGene:4332841	ProteinID:ABF95928.1
EMBL:AK073164	ProteinID:BAF12027.1	ProteinID:BAS84193.1	ProteinID:EAZ26910.1	GO:GO:0000154	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005730	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0030515	GO:GO:0031428	GO:GO:0032040	InterPro:Helix_hairpin_bin_sf	InterPro:IPR002687	InterPro:IPR029012
InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf	EnsemblPlantsGene:Os03g0350300	EnsemblPlants:Os03t0350300-01
PFAM:PF01798	PFAM:PF08156	PFscan:PS51358	PANTHER:PTHR10894	PANTHER:PTHR10894:SF1	UniProt:Q10LH4
SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI0000DB4631	RefSeq:XP_015630760.1	SEG:seg	:

Description

brassinosteroid receptor kinase (BRI1)-interacting protein 102, BRI1-interacting protein 102, brassinosteroid receptor kinase-interacting protein 102Similar to SAR DNA-binding protein-like protein. (Os03t0350300-01)

Coordinates

chr3:-:13133569..13137486

Molecular Weight (calculated)

62635.2 Da

IEP (calculated)

9.456

GRAVY (calculated)

-0.642

Length

568 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA TLIIDSKPTK GLRKFLQKHC EGETLAVADS KLGNAIKEKL
101: KIDCLHNSAV MELMRGLRNQ LTELISGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVADNI
201: QYAKVVKMMG DRTNAESLDF SEILSDDEVE AQLKEAAVIS MGTEVSELDL LNIRELCDQV LALSEYRAQL FDYLRSRMNT IAPNLTALVG ELVGARLIAH
301: GGSLVNLAKQ PGSTIQILGA EKALFRALKT KHATPKYGLI YHASLIGQAA PKHKGKISRS LAAKTALAIR YDALGDGEDN SIGLESRVKL ETRLRVLEGK
401: ELGRSAGSTK GKPKIEVYEK DRKKGAGALI TPAKTYNPAA DLVLGQSTEE TPKKPEGASK KRKHQETEPA PAEKTTKEDG DQEGEKKKKK KKSKESEESP
501: AADADGGKKK KKTSKESEEP PVATTEGEKK EKKKKKKSDS QDAEDVAMET EESGKKEKKK KKKHHSDE

Best Arabidopsis Sequence Match ( AT3G05060.1 )
(BLAST)

001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

Arabidopsis Description

NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.