Factsheet for Zm00001d029144_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038818_P001	Maize	cytosol	50.71	98.96
Zm00001d034259_P001	Maize	cytosol	25.0	95.92
KXG39385	Sorghum	cytosol	95.74	94.9
Zm00001d047481_P003	Maize	plastid	94.33	94.66
Zm00001d007484_P001	Maize	cytosol	56.03	92.13
Zm00001d011996_P002	Maize	cytosol	48.76	89.0
Os03t0350300-01	Rice	nucleus	87.94	87.32
Os03t0350100-02	Rice	nucleus	87.77	87.15
HORVU4Hr1G041810.4	Barley	cytosol	82.27	85.45
TraesCS2D01G120400.1	Wheat	nucleus	82.45	83.04
TraesCS1B01G379200.1	Wheat	cytosol	82.45	83.04
TraesCS4A01G141500.1	Wheat	nucleus	84.04	82.01
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	82.8	76.94
Solyc05g055880.2.1	Tomato	nucleus	69.86	76.8
GSMUA_Achr8P09940_001	Banana	cytosol	79.43	76.19
GSMUA_Achr11P...	Banana	cytosol	78.9	76.07
VIT_14s0030g01270.t01	Wine grape	nucleus	75.53	74.35
PGSC0003DMT400060016	Potato	cytosol	70.74	73.75
PGSC0003DMT400015638	Potato	cytosol	71.63	73.72
Solyc09g083080.2.1	Tomato	nucleus	71.63	73.19
KRH29399	Soybean	nucleus	71.28	72.96
KRH24415	Soybean	nucleus	71.1	72.12
CDX80674	Canola	cytosol	68.44	72.01
CDY19706	Canola	nucleus	67.91	71.59
Bra009978.1-P	Field mustard	nucleus	67.91	71.32
CDX86179	Canola	nucleus	67.91	71.32
AT3G05060.1	Thale cress	cytosol	67.38	71.29
CDY00004	Canola	nucleus	67.73	71.27
Bra036111.1-P	Field mustard	nucleus	67.55	71.08
AT5G27120.1	Thale cress	cytosol	65.96	69.79
CDY52494	Canola	nucleus	65.6	69.68
Bra020601.1-P	Field mustard	nucleus	59.93	69.26
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	63.3	68.0
AT5G27140.2	Thale cress	cytosol	48.4	60.67
Zm00001d031027_P001	Maize	plastid	63.12	60.24
Zm00001d036776_P001	Maize	mitochondrion	62.59	57.4
Zm00001d029174_P005	Maize	nucleus	38.83	39.89
Zm00001d047472_P002	Maize	plastid	39.18	38.84
Zm00001d002716_P002	Maize	nucleus	16.67	19.38

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	EntrezGene:100384739	MapMan:17.1.1.2.1.5.3	UniProt:A0A1D6K329
InterPro:Helix_hairpin_bin_sf	InterPro:IPR002687	InterPro:IPR029012	InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom
InterPro:Nop_dom_sf	ProteinID:ONL98058.1	ProteinID:ONL98060.1	ProteinID:ONL98062.1	PFAM:PF01798	PFAM:PF08156
PFscan:PS51358	PANTHER:PTHR10894	PANTHER:PTHR10894:SF1	SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI0002214F4A
EnsemblPlantsGene:Zm00001d029144	EnsemblPlants:Zm00001d029144_P004	EnsemblPlants:Zm00001d029144_T004	SEG:seg	:	:

Description

Probable nucleolar protein 5-1

Coordinates

chr1:-:60427133..60431202

Molecular Weight (calculated)

62081.5 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.592

Length

564 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA TLIIDSKPSK GLRKFLQKHC EGETLAVADS KLGNAIKEKL
101: KIDCLHNSAV MELMRGLRNQ LTELITGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVTDNI
201: QYAKVVKMMG NRTNAVNLDF SEILSDEELE TQLKEAAVIS MGTEVSDLDL SNIRELCDQV LALSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLIAH
301: GGSLLNLAKQ PGSTIQILGA EKALFRALKT KHSTPKYGLI YHASLIGKAS QKHKGKISRS LAAKTALAIR YDALGDGEDN SIGTESRLKL ETRLQVLEGR
401: ELGKSAGSTK GKPKIEVYEK DRKQGAGALT TPAKTYNPAA DLVLTEETPK KSELASKKRK HHEVQTEPSA ELAEGAVQED RKKKKKNKES EEAPAAEGDG
501: EKKKKKKSKD VGEEPAVAAA AATEGEKKKK KKKSDADGEG VTTQTEESGK KDKKKKKKRH ADDE

Best Arabidopsis Sequence Match ( AT3G05060.1 )
(BLAST)

001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

Arabidopsis Description

NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.