CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038818_P001	Maize	cytosol	49.74	97.92
Zm00001d047481_P003	Maize	plastid	94.73	95.91
Zm00001d029144_P004	Maize	cytosol	94.9	95.74
KXG34017	Sorghum	cytosol	93.85	94.01
Zm00001d034259_P001	Maize	cytosol	24.25	93.88
Zm00001d007484_P001	Maize	cytosol	55.36	91.84
Os03t0350100-02	Rice	nucleus	88.93	89.08
Os03t0350300-01	Rice	nucleus	88.75	88.91
HORVU4Hr1G041810.4	Barley	cytosol	81.9	85.82
TraesCS2D01G120400.1	Wheat	nucleus	82.78	84.11
TraesCS1B01G379200.1	Wheat	cytosol	82.78	84.11
TraesCS4A01G141500.1	Wheat	nucleus	84.89	83.56
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	83.13	77.92
Solyc05g055880.2.1	Tomato	nucleus	69.95	77.58
GSMUA_Achr8P09940_001	Banana	cytosol	78.73	76.19
GSMUA_Achr11P...	Banana	cytosol	78.21	76.07
PGSC0003DMT400015638	Potato	cytosol	72.23	75.0
PGSC0003DMT400060016	Potato	cytosol	71.18	74.86
VIT_14s0030g01270.t01	Wine grape	nucleus	75.22	74.69
Solyc09g083080.2.1	Tomato	nucleus	72.23	74.46
KRH29399	Soybean	nucleus	70.65	72.96
KRH24415	Soybean	nucleus	70.47	72.12
CDX80674	Canola	cytosol	67.84	72.01
AT3G05060.1	Thale cress	cytosol	67.31	71.86
CDY19706	Canola	nucleus	67.31	71.59
CDX86179	Canola	nucleus	67.49	71.51
Bra009978.1-P	Field mustard	nucleus	67.49	71.51
CDY00004	Canola	nucleus	67.14	71.27
Bra036111.1-P	Field mustard	nucleus	66.96	71.08
AT5G27120.1	Thale cress	cytosol	66.26	70.73
CDY52494	Canola	nucleus	65.2	69.87
Bra020601.1-P	Field mustard	nucleus	59.58	69.47
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	62.92	68.19
AT5G27140.2	Thale cress	cytosol	47.98	60.67
Zm00001d031027_P001	Maize	plastid	62.04	59.73
Zm00001d036776_P001	Maize	mitochondrion	61.51	56.91
EER92268	Sorghum	nucleus	39.37	40.73
EER97682	Sorghum	endoplasmic reticulum	38.14	38.41
KXG30826	Sorghum	nucleus	14.94	19.45
OQU82106	Sorghum	nucleus	16.52	19.42

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:17.1.1.2.1.5.3	UniProt:A0A1B6QN92	InterPro:Helix_hairpin_bin_sf
InterPro:IPR002687	InterPro:IPR029012	ProteinID:KXG39384.1	EnsemblPlants:KXG39385	ProteinID:KXG39385	ProteinID:KXG39385.1
InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf	PFAM:PF01798	PFAM:PF08156
PFscan:PS51358	PANTHER:PTHR10894	PANTHER:PTHR10894:SF1	SMART:SM00931	EnsemblPlantsGene:SORBI_3001G372800	SUPFAM:SSF89124
UniParc:UPI0002207014	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:66079510..66083684

Molecular Weight (calculated)

62896.6 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.625

Length

569 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA TLIIDSKPSK GLRKFLQKHC EGETLAVADS KLGNAIKEKL
101: KIDCLHNSAV MELMRGLRNQ LTELITGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVTDNI
201: QYAKVVKMMG NRTNAVDLDF SEILSDEEIE TQLKEAAVIS MGTEVSDLDL SNIKELCDQV LALSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLIAH
301: GGSLLNLAKQ PGSTIQILGA EKALFRALKT KHSTPKYGLI YHASLIGKAS QKHKGKISRS LAAKTALAIR YDALGDGEDN SIGTESRLKL ETRLQVLENR
401: ELGKSAGSIK GKPKIEVYEK DRKKGAGALT TPAKTYNPAA DLVLTEETPK KSELASKKRK HHEVKTEPSA VPAEEAIQED GDQEDRKKKK KKKSKESEEA
501: PAVEGDGEKK KKKKSKEAQE EPAVAAASEG EKKKKKKKSD ADGEDVAMQT EESGKKDKKK KKKKHADDE

Best Arabidopsis Sequence Match ( AT5G27120.1 )
(BLAST)

001: MLILFETPGG FAIFKVLNEG KLSNVEDLGN EFSTAKLARK MVKLVAFDKF DNTAEALEAV AKLLEGTPSK GLRKFLKANC VGETLAVADS KLGNIIKEKL
101: KIVCVHNNAV MELLRGIRSQ LTELISGLGD QDLGPMSLGL SHSLARYKLK FSSDKVDTMI IQAIGLLDDL DKELNTYAMR VREWFGWHFP ELAKIVQDNI
201: LYAKAVKLMG NRINAAKLDF SEILADEIEA ELKEAAVISM GTEVSDLDLL HIRELCDQVL SLAEYRAQLY DYLKSRMNTI APNLTALVGE LVGARLISHG
301: GSLLNLAKQP GSTVQILGAE KALFRALKTK HATPKYGLIF HASVVGQAAP KNKGKISRSL AAKSVLAIRC DALGDSQDNT MGVENRLKLE ARLRTLEGKD
401: LGRLSGSAKG KPKIEVYDKD KKKGSGGLIT PAKTYNTAAD SLLQTPTVDS ENGVKEKKDK KKKKKADDEE EAKTEEPSKK KSNKKKTEAE PETAEEPAKK
501: EKKKKRKHEE EETEMPAKKK EKSEKKKKKK TEV

Arabidopsis Description

NOP5-1Probable nucleolar protein 5-1 [Source:UniProtKB/Swiss-Prot;Acc:O04658]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.