CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39385	Sorghum	cytosol	94.01	93.85
Zm00001d011996_P002	Maize	cytosol	48.42	89.0
Os03t0350100-02	Rice	nucleus	88.73	88.73
Os03t0350300-01	Rice	nucleus	88.38	88.38
HORVU4Hr1G041810.4	Barley	cytosol	81.69	85.45
TraesCS2D01G120400.1	Wheat	nucleus	82.39	83.57
TraesCS1B01G379200.1	Wheat	cytosol	82.22	83.39
TraesCS4A01G141500.1	Wheat	nucleus	84.15	82.7
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	82.92	77.59
Solyc05g055880.2.1	Tomato	nucleus	69.54	77.0
GSMUA_Achr8P09940_001	Banana	cytosol	79.05	76.36
GSMUA_Achr11P...	Banana	cytosol	78.35	76.07
PGSC0003DMT400060016	Potato	cytosol	70.6	74.12
PGSC0003DMT400015638	Potato	cytosol	71.48	74.09
VIT_14s0030g01270.t01	Wine grape	nucleus	74.3	73.65
Solyc09g083080.2.1	Tomato	nucleus	71.3	73.37
KRH29399	Soybean	nucleus	70.42	72.6
KRH24415	Soybean	nucleus	70.6	72.12
CDX80674	Canola	cytosol	67.61	71.64
AT3G05060.1	Thale cress	cytosol	67.08	71.48
CDY19706	Canola	nucleus	67.08	71.22
CDX86179	Canola	nucleus	67.08	70.95
Bra009978.1-P	Field mustard	nucleus	67.08	70.95
CDY00004	Canola	nucleus	66.9	70.9
Bra036111.1-P	Field mustard	nucleus	66.73	70.71
AT5G27120.1	Thale cress	cytosol	65.49	69.79
CDY52494	Canola	nucleus	64.61	69.11
Bra020601.1-P	Field mustard	nucleus	59.15	68.85
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	62.68	67.81
AT5G27140.2	Thale cress	cytosol	47.71	60.22
EER92268	Sorghum	nucleus	38.91	40.18
EER97682	Sorghum	endoplasmic reticulum	37.5	37.7
KXG30826	Sorghum	nucleus	14.44	18.76
OQU82106	Sorghum	nucleus	15.67	18.39

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:17.1.1.2.1.5.3	UniProt:A0A1B6Q7Y9	InterPro:Helix_hairpin_bin_sf
InterPro:IPR002687	InterPro:IPR029012	EnsemblPlants:KXG34017	ProteinID:KXG34017	ProteinID:KXG34017.1	InterPro:NOP5_N
InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf	PFAM:PF01798	PFAM:PF08156	PFscan:PS51358
PANTHER:PTHR10894	PANTHER:PTHR10894:SF1	SMART:SM00931	EnsemblPlantsGene:SORBI_3003G407800	SUPFAM:SSF89124	UniParc:UPI00081ACAC5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:71553674..71557498

Molecular Weight (calculated)

62760.4 Da

IEP (calculated)

9.360

GRAVY (calculated)

-0.611

Length

568 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA TLIIDSKPSK GLRKFLQKHC EGETLAVADS KLGNSIKEKL
101: KIDCLHNSAV MELMRGLRNQ LTELITGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVTDNI
201: QYAKVVKMMG DRANAVNLDF SEILSDEELE TQLKEAAVIS MGTEVSDLDL LNIKELCDQV LALSEYRAQL YEYLRSRMNT IAPNLTALVG ELVGARLIAH
301: GGSLLNLAKQ PGSTIQILGA EKALFRALKT KHSTPKYGLI YHASLIGKAS QKHKGKISRS LAAKTALAIR YDALGDGEDN SIGTESRLKL ETRLQVLEGR
401: ELGKSAGSTK GKPKIEVYEK DRKKGAGALT TPAKTYNPAA DLVLGHSTEE TPKKSELASK KRKHHEAETA PSAEPEEEAI QEDGDQEGRK KKKKKNKETE
501: ETPAVEADGE KKKKKKSKED GEPVAALEGE KKKKKKISDA DGENVAMQTE ASAKKDKKKK KKRHADDE

Best Arabidopsis Sequence Match ( AT3G05060.1 )
(BLAST)

001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

Arabidopsis Description

NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.