Factsheet for GSMUA_Achr11P05790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038818_P001	Maize	cytosol	44.62	90.31
GSMUA_Achr8P09940_001	Banana	cytosol	90.6	90.14
Zm00001d034259_P001	Maize	cytosol	22.39	89.12
Zm00001d007484_P001	Maize	cytosol	49.06	83.67
Solyc05g055880.2.1	Tomato	nucleus	71.45	81.48
PGSC0003DMT400015638	Potato	cytosol	74.53	79.56
Zm00001d011996_P002	Maize	cytosol	41.71	78.96
PGSC0003DMT400060016	Potato	cytosol	72.99	78.93
Zm00001d029144_P004	Maize	cytosol	76.07	78.9
Os03t0350100-02	Rice	nucleus	76.58	78.87
TraesCS2D01G120400.1	Wheat	nucleus	75.38	78.75
TraesCS2A01G119400.1	Wheat	nucleus	75.38	78.75
VIT_14s0030g01270.t01	Wine grape	nucleus	77.09	78.71
HORVU2Hr1G020690.6	Barley	cytosol	72.65	78.7
Os03t0350300-01	Rice	nucleus	76.41	78.7
Zm00001d047481_P003	Maize	plastid	75.56	78.65
KXG34017	Sorghum	cytosol	76.07	78.35
HORVU4Hr1G041810.4	Barley	cytosol	72.65	78.27
TraesCS1B01G379200.1	Wheat	cytosol	74.87	78.21
KXG39385	Sorghum	cytosol	76.07	78.21
Solyc09g083080.2.1	Tomato	nucleus	73.68	78.08
KRH29399	Soybean	nucleus	71.62	76.04
KRH24415	Soybean	nucleus	71.97	75.72
TraesCS4A01G141500.1	Wheat	nucleus	73.85	74.74
AT3G05060.1	Thale cress	cytosol	67.69	74.3
CDY19706	Canola	nucleus	67.52	73.83
Bra009978.1-P	Field mustard	nucleus	67.69	73.74
CDX86179	Canola	nucleus	67.69	73.74
CDX80674	Canola	cytosol	67.52	73.69
CDY00004	Canola	nucleus	67.52	73.69
Bra036111.1-P	Field mustard	nucleus	67.35	73.51
AT5G27120.1	Thale cress	cytosol	66.67	73.17
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	75.21	72.49
CDY52494	Canola	nucleus	65.13	71.75
Bra020601.1-P	Field mustard	nucleus	58.8	70.49
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	63.08	70.29
AT5G27140.2	Thale cress	cytosol	48.03	62.44
Zm00001d031027_P001	Maize	plastid	55.56	54.99
Zm00001d036776_P001	Maize	mitochondrion	55.04	52.36
GSMUA_Achr5P08210_001	Banana	nucleus	36.24	38.13
GSMUA_AchrUn_...	Banana	nucleus	35.73	37.46
GSMUA_Achr3P06150_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	16.24	19.31
GSMUA_Achr9P14550_001	Banana	plasma membrane	12.65	16.93

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:17.1.1.2.1.5.3	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr11G05790_001
EnsemblPlants:GSMUA_Achr11P05790_001	EnsemblPlants:GSMUA_Achr11T05790_001	InterPro:Helix_hairpin_bin_sf	InterPro:IPR002687	InterPro:IPR029012	UniProt:M0RPQ9
InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf	PFAM:PF01798	PFAM:PF08156
PFscan:PS51358	PANTHER:PTHR10894	PANTHER:PTHR10894:SF1	SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI0002956A5D
SEG:seg	:	:	:	:	:

Description

Probable nucleolar protein 5-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05790_001]

Coordinates

chr11:+:4303669..4307895

Molecular Weight (calculated)

64554.8 Da

IEP (calculated)

9.771

GRAVY (calculated)

-0.580

Length

585 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKILDEG KLDKVEDLWK EFATSESARK IVKLKAFNKF ENTSDALSAA TLLIDSKPSK GLRKFLRTHC DGETLAVADS KLGNAIKEKL
101: KIDCLHNNAV MELMRGLRNQ LTELISGLAV QDLAPMSLGL SHSLSRYKLK FSPDKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELAKIVQDNI
201: QYAKVVKLMG NRTNAVNLDF SEVLSEETEA ELKEAAVISM GTEVSDLDLA NIKELCDQVL ALSEYRAQLY DYLKSRMNTI APNLTALVGE LVGARLIAHG
301: GSLLNLAKQP GSTVQILGAE KALFRALKTK HATPKYGLIF HASLIGQAAP KIKGKISRSL AAKTALAIRY DALGDGQDNT MGLENRAKLE ARLRVLEGRE
401: LGRSAGSTKG KPKIEFYDKD RKKGAGALIT PAKTYNPSAD LVFGQTTDLA PSKQAAEQEA TLRKKRKHEE AELEPTGEAS EDPPKEEGEG EGEKRKKKKK
501: KIELGSADDQ ISISEAEEQT KKKKKKKKDK APGPELVNQD NIAAPESEEE LSKKKKKKKK QAEEEQAAGD ASNRKKDKKK KDKGL

Best Arabidopsis Sequence Match ( AT3G05060.1 )
(BLAST)

001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

Arabidopsis Description

NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.