Factsheet for Os03t0350100-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	mitochondrion, nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 18203134
nucleus: 19621931
cytosol: 19685898
nucleus: 23777608
golgi: 25047511
nucleus: 26035336

msms PMID: 18203134 doi

G Li, BR Nallamilli, F Tan, Z Peng

Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0350300-01	Rice	nucleus	97.18	97.18
Zm00001d038818_P001	Maize	cytosol	48.42	95.16
Zm00001d034259_P001	Maize	cytosol	23.24	89.8
KXG39385	Sorghum	cytosol	89.08	88.93
Zm00001d047481_P003	Maize	plastid	87.85	88.79
KXG34017	Sorghum	cytosol	88.73	88.73
Zm00001d007484_P001	Maize	cytosol	53.17	88.05
Zm00001d029144_P004	Maize	cytosol	87.15	87.77
HORVU4Hr1G041810.4	Barley	cytosol	83.63	87.48
TraesCS1B01G379200.1	Wheat	cytosol	84.51	85.71
TraesCS2D01G120400.1	Wheat	nucleus	84.51	85.71
TraesCS4A01G141500.1	Wheat	nucleus	86.44	84.95
Zm00001d011996_P002	Maize	cytosol	45.6	83.82
TraesCS2B01G139100.1	Wheat	endoplasmic reticulum, plastid	84.68	79.24
Solyc05g055880.2.1	Tomato	nucleus	71.48	79.14
GSMUA_Achr8P09940_001	Banana	cytosol	80.11	77.38
GSMUA_Achr11P...	Banana	cytosol	78.87	76.58
PGSC0003DMT400060016	Potato	cytosol	72.89	76.53
PGSC0003DMT400015638	Potato	cytosol	73.06	75.73
Solyc09g083080.2.1	Tomato	nucleus	72.89	75.0
KRH29399	Soybean	nucleus	72.36	74.59
VIT_14s0030g01270.t01	Wine grape	nucleus	75.18	74.52
CDX80674	Canola	cytosol	69.72	73.88
KRH24415	Soybean	nucleus	72.01	73.56
CDY19706	Canola	nucleus	69.19	73.46
CDY00004	Canola	nucleus	69.01	73.13
Bra036111.1-P	Field mustard	nucleus	68.84	72.95
CDX86179	Canola	nucleus	68.66	72.63
Bra009978.1-P	Field mustard	nucleus	68.66	72.63
AT3G05060.1	Thale cress	cytosol	67.96	72.42
AT5G27120.1	Thale cress	cytosol	67.25	71.67
CDY52494	Canola	nucleus	66.02	70.62
Bra020601.1-P	Field mustard	nucleus	60.21	70.08
CDY50583	Canola	cytosol, mitochondrion, nucleus, plastid	63.73	68.95
AT5G27140.2	Thale cress	cytosol	49.12	62.0
Zm00001d031027_P001	Maize	plastid	59.86	57.53
Zm00001d036776_P001	Maize	mitochondrion	59.33	54.8
Os03t0352300-01	Rice	nucleus	38.91	40.04
Os07t0661800-01	Rice	nucleus	21.48	38.98
Os07t0141600-01	Rice	nucleus	16.73	19.63
Os04t0555400-01	Rice	nucleus	16.55	19.42
Os02t0730100-00	Rice	extracellular	1.41	5.44

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:17.1.1.2.1.5.3	EntrezGene:4332840	ProteinID:ABF95925.1
ProteinID:ABF95926.1	ProteinID:ABF95927.1	EMBL:AK099754	ProteinID:BAS84191.1	ncoils:Coil	InterPro:Helix_hairpin_bin_sf
InterPro:IPR002687	InterPro:IPR029012	InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf
EnsemblPlantsGene:Os03g0350100	EnsemblPlants:Os03t0350100-02	PFAM:PF01798	PFAM:PF08156	PFscan:PS51358	PANTHER:PTHR10894
PANTHER:PTHR10894:SF1	UniProt:Q10LH5	SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI0000DB49E8	RefSeq:XP_015630758.1
RefSeq:XP_015630759.1	SEG:seg	:	:	:	:

Description

brassinosteroid receptor kinase (BRI1)-interacting protein 101, BRI1-interacting protein 101, brassinosteroid receptor kinase-interacting protein 101SAR DNA-binding protein-2. (Os03t0350100-01);SAR DNA-binding protein-2. (Os03t0350100-02)

Coordinates

chr3:-:13126146..13130219

Molecular Weight (calculated)

62462.1 Da

IEP (calculated)

9.659

GRAVY (calculated)

-0.614

Length

568 amino acids

Sequence
(BLAST)

001: MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA TLIIDSKPTK GLRKFLQKHC EGETLAVADS KLGNAIKEKL
101: KIDCLHNSAV MELMRGLRNQ LTELISGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP ELTKIVADNI
201: QYAKVVKMMG DRTNAESLDF SEILSDDEVE AQLKEAAVIS MGTEVSELDL LNIRELCDQV LALSEYRAQL FDYLRSRMNT IAPNLTALVG ELVGARLIAH
301: GGSLVNLAKQ PGSTIQILGA EKALFRALKT KHATPKYGLI YHASLIGQAA PKHKGKISRS LAAKTALAIR YDALGDGEDN SIGLESRVKL ETRLRVLEGK
401: ELGRSAGSTK GKPKIEVYEK DRKKGAGALI TPAKTYNPAA DLVLGQSTEE TPKKPEGASK KRKHQEAEPA GAEETIQEDG DQEGQKKKKK KKSKDSEDSP
501: VADADGGKKK KKKSKESEEP PVATAEGEKK EKKKKKKSDS QDAKDVAMET EASGKKDKKK KKKKHGDE

Best Arabidopsis Sequence Match ( AT5G27140.2 )
(BLAST)

001: MLVLFETSGG FALFKVLDEG KLSNVEDLGT EFYSAESARR MGLHKFLKNN CDDGEILAVA DPKLGDIITE KLDIECVHND AVMELLRGVR SQLTELLSGL
101: DDNDLAPVSL ELSHILARYK LKITSDKVET MIILSISLLD DLDKELNTYT TSVCELYGLH FPELANIVQD NILYAKVVKL MGNRINAATL DFSEILADEV
201: EAELKEASMV STRTEVSDLD LMHIQELCDQ VLSIAEDKTL LCDDLKNKMN KIAPNLTALV GELVGARLIS HCGSLWNLSK LPWSTIQILG AEKTLYKALK
301: TKQATPKYGL IYHAPLVRQA APENKGKIAR SLAAKSALAI RCDAFGNGQD NTMGVESRLK LEARLRNLEG GDLGACEEEE EVNDKDTKKE ADDEEEPKTE
401: ECSKKRKKEA ELETVEDPAK KSKQEGVTGL LLLMLLISLI YFFSVNQLLW

Arabidopsis Description

NOP5-3Putative nucleolar protein 5-3 [Source:UniProtKB/Swiss-Prot;Acc:O04656]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.