Factsheet for Os04t0555400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0141600-01	Rice	nucleus	94.01	94.01
Zm00001d002716_P002	Maize	nucleus	93.39	93.2
OQU82106	Sorghum	nucleus	92.98	92.98
TraesCS2B01G046400.1	Wheat	nucleus	88.22	89.71
TraesCS1D01G383400.2	Wheat	nucleus	89.67	89.48
TraesCS1A01G376100.1	Wheat	nucleus	89.67	89.48
GSMUA_Achr3P06150_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	86.36	84.96
TraesCS1B01G396600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.46	83.91
Solyc08g078430.2.1	Tomato	nucleus	83.68	83.85
PGSC0003DMT400012169	Potato	nucleus	83.68	83.85
KRG94405	Soybean	nucleus	84.09	83.74
KRH07033	Soybean	nucleus	84.09	83.74
TraesCS2B01G267700.1	Wheat	cytosol	80.79	83.55
VIT_01s0026g00230.t01	Wine grape	cytosol	82.64	78.59
CDY72546	Canola	nucleus	67.56	77.86
Bra031522.1-P	Field mustard	nucleus	76.45	76.13
AT1G60170.1	Thale cress	nucleus	74.79	74.64
CDY04340	Canola	plasma membrane	73.14	74.53
CDY24519	Canola	nucleus	73.35	73.05
CDY54131	Canola	mitochondrion	73.35	71.86
GSMUA_Achr9P14550_001	Banana	plasma membrane	64.05	70.94
CDY39628	Canola	nucleus	62.4	66.23
PGSC0003DMT400000083	Potato	cytosol, nucleus, plasma membrane	62.19	66.01
Solyc07g064070.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus	61.78	66.0
PGSC0003DMT400049589	Potato	cytosol, nucleus, plastid	62.6	65.87
CDY36542	Canola	nucleus	56.61	65.39
Bra026149.1-P	Field mustard	nucleus	64.26	64.26
Os02t0730100-00	Rice	extracellular	17.98	59.18
AT1G70400.3	Thale cress	cytosol	28.51	50.37
Os03t0350100-02	Rice	nucleus	19.42	16.55
Os03t0350300-01	Rice	nucleus	19.21	16.37
Os03t0352300-01	Rice	nucleus	17.56	15.4
Os07t0661800-01	Rice	nucleus	8.47	13.1

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	MapMan:16.4.1.3.3	EntrezGene:4336619	EMBL:AK066109
EMBL:AK120749	ProteinID:BAF15430.1	ProteinID:BAS90423.1	ProteinID:CAD41638.2	GO:GO:0000244	GO:GO:0000398
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005687	GO:GO:0005690
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0046540
GO:GO:0071011	GO:GO:0097526	InterPro:Helix_hairpin_bin_sf	InterPro:IPR002687	InterPro:IPR029012	InterPro:NOSIC
InterPro:Nop_dom	InterPro:Nop_dom_sf	EnsemblPlantsGene:Os04g0555400	EnsemblPlants:Os04t0555400-01	PFAM:PF01798	PFAM:PF09785
PFscan:PS51358	PANTHER:PTHR13904	PANTHER:PTHR13904:SF0	InterPro:Prp31	InterPro:Prp31_C	UniProt:Q7XU07
SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI000021C78D	RefSeq:XP_015635445.1	SEG:seg	:

Description

OsWD40-105Similar to Serologically defined breast cancer antigen NY-BR-99. (Os04t0555400-01)

Coordinates

chr4:+:27791895..27795858

Molecular Weight (calculated)

52820.2 Da

IEP (calculated)

6.224

GRAVY (calculated)

-0.380

Length

484 amino acids

Sequence
(BLAST)

001: MASLADSFLA DLDELSDNEA YPEEENAEAV GTEEIGDDDM PDLESLNYDD LDSVSKLQKT QRYNDIMQKV ENALQKGTDF SNQRSILEED PEYQLIVDCN
101: ALSVDIENEI IIIHNFIRDK YRLKFPELES LVHHPIDYAR VVQKIGNEMD LTLVDLEGLL PSAIIMVISV TASTTSGKPL SEENLVKTIE ACERALTLDA
201: AKKKVLEFVE SRMGYIAPNL SAIVGSAVAS KLMGTAGGLG ALAKMPACNV QLLGAKRKNL AGFSTATSQF RVGYLEQTDV FQSTPPALRT RACRLIAAKS
301: TLAARIDSIR GDPTGKAGRN LLEEIRKKIE KWQEPPPAKL PKPLPVPDFE PKKKRGGRRL RKMKERYAQT DMMKLANRMQ FGVPEESSLG DGLGEGYGML
401: GQAGSGKLRV STAPSKLSAK ITKKFKEKSY GSSGATSGLT SSLAFTPVQG IELSNPQAHG NLLGSGTQST YFSETGTFSK IKRT

Best Arabidopsis Sequence Match ( AT1G60170.1 )
(BLAST)

001: MATLEDSFLA DLDELSDNEA ELDENDGDVG KEEEDVDMDM ADLETLNYDD LDNVSKLQKS QRYADIMHKV EEALGKDSDG AEKGTVLEDD PEYKLIVDCN
101: QLSVDIENEI VIVHNFIKDK YKLKFQELES LVHHPIDYAC VVKKIGNETD LALVDLADLL PSAIIMVVSV TALTTKGSAL PEDVLQKVLE ACDRALDLDS
201: ARKKVLEFVE SKMGSIAPNL SAIVGSAVAA KLMGTAGGLS ALAKMPACNV QVLGHKRKNL AGFSSATSQS RVGYLEQTEI YQSTPPGLQA RAGRLVAAKS
301: TLAARVDATR GDPLGISGKA FREEIRKKIE KWQEPPPARQ PKPLPVPDSE PKKRRGGRRL RKMKERYQVT DMRKLANRMA FGTPEESSLG DGLGEGYGML
401: GQAGSNRLRV SSVPSKLKIN AKVAKKLKER QYAGGATTSG LTSSLAFTPV QGIELCNPQQ ALGLGSGTQS TYFSESGTFS KLKKI

Arabidopsis Description

PRP31Emb1220 [Source:UniProtKB/TrEMBL;Acc:A0A178WCJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.