Factsheet for AT2G17190.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G17200.1	Thale cress	cytosol	86.25	84.21
CDX88001	Canola	cytosol	81.97	81.37
Bra002028.1-P	Field mustard	cytosol, plastid	81.6	79.82
CDY31374	Canola	cytosol, plastid	79.37	79.66
CDX71349	Canola	cytosol	81.04	79.56
CDY26796	Canola	cytosol	78.07	79.4
CDY07870	Canola	cytosol	79.18	79.18
Bra009657.1-P	Field mustard	cytosol	80.86	78.8
CDY47488	Canola	cytosol	74.72	76.57
Bra037281.1-P	Field mustard	cytosol	76.58	76.01
VIT_03s0038g03680.t01	Wine grape	cytosol	63.01	58.45
GSMUA_Achr5P11110_001	Banana	cytosol	57.43	57.97
TraesCS4B01G325900.2	Wheat	cytosol	56.69	57.33
HORVU4Hr1G082050.15	Barley	cytosol	56.13	56.55
EER92919	Sorghum	cytosol	55.76	55.76
Zm00001d048343_P001	Maize	cytosol	55.2	55.72
Zm00001d027514_P002	Maize	cytosol	55.2	55.41
GSMUA_Achr1P02770_001	Banana	extracellular, plasma membrane, vacuole	45.91	54.29
TraesCS4D01G322800.1	Wheat	cytosol	57.25	54.23
Os03t0131300-01	Rice	plasma membrane	53.53	53.93
TraesCS1D01G206500.1	Wheat	cytosol	56.51	53.9
Os10t0542200-01	Rice	plasma membrane, plastid	57.43	53.74
TraesCS5A01G498100.1	Wheat	cytosol	56.69	53.7
TraesCS1A01G203000.1	Wheat	cytosol	56.51	53.52
TraesCS1B01G217000.1	Wheat	cytosol	56.51	53.52
GSMUA_Achr1P14990_001	Banana	cytosol	54.65	53.07
GSMUA_Achr3P00530_001	Banana	cytosol	54.28	52.8
GSMUA_Achr7P04060_001	Banana	cytosol	52.97	52.29
EER92003	Sorghum	cytosol	55.2	51.21
HORVU1Hr1G052260.2	Barley	cytosol	53.9	50.79
Zm00001d047373_P001	Maize	cytosol	54.09	50.52
Zm00001d029782_P004	Maize	cytosol	55.39	50.25
GSMUA_Achr1P02760_001	Banana	cytosol	8.36	34.88

Protein Annotations

Gene3D:1.10.8.10	MapMan:19.3.4.6	Gene3D:3.10.20.90	EntrezGene:816224	ProteinID:AAD25137.2	ProteinID:AEC06596.1
EMBL:AF360159	EMBL:AK228616	ArrayExpress:AT2G17190	EnsemblPlantsGene:AT2G17190	RefSeq:AT2G17190	TAIR:AT2G17190
RefSeq:AT2G17190-TAIR-G	EnsemblPlants:AT2G17190.1	TAIR:AT2G17190.1	EMBL:AY042828	EMBL:AY081450	EMBL:AY113886
Unigene:At.21851	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0031593	InterPro:IPR000626
InterPro:IPR015940	RefSeq:NP_565407.1	PFAM:PF00240	PFAM:PF00627	PO:PO:0000293	PFscan:PS50030
PFscan:PS50053	PANTHER:PTHR10677	PANTHER:PTHR10677:SF38	UniProt:Q9SII9	SMART:SM00165	SMART:SM00213
SMART:SM00727	SUPFAM:SSF46934	SUPFAM:SSF54236	InterPro:STI1_HS-bd	InterPro:UBA	InterPro:UBA-like_sf
UniParc:UPI00000A2C6D	InterPro:Ubiquilin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

DSK2AUbiquitin domain-containing protein DSK2a [Source:UniProtKB/Swiss-Prot;Acc:Q9SII9]

Coordinates

chr2:-:7477845..7481690

Molecular Weight (calculated)

57288.9 Da

IEP (calculated)

4.417

GRAVY (calculated)

-0.442

Length

538 amino acids

Sequence
(BLAST)

001: MGGEADSRQP LTAEGVAVAV NVRCSNGTKF SVTTSLDSTV ESFKELIAQN SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTVHMVRGF VPSSPSAPAA
101: NAGNQTTAPQ AVGSNDSSNL GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN NPEFMRSMIM NNPQMRELVD
201: RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN
301: NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ
401: LRSMLDMNPQ LREMMQNPDF LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG GLSGTNQPNV PPEERFATQL
501: QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.