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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G17190.1 Thale cress cytosol 84.21 86.25
Bra002028.1-P Field mustard cytosol, plastid 83.12 83.27
CDY31374 Canola cytosol, plastid 79.85 82.09
CDX71349 Canola cytosol 80.76 81.2
CDY26796 Canola cytosol 77.68 80.91
CDX88001 Canola cytosol 79.13 80.44
CDY07870 Canola cytosol 78.04 79.93
Bra009657.1-P Field mustard cytosol 80.04 79.89
CDY47488 Canola cytosol 74.95 78.67
Bra037281.1-P Field mustard cytosol 76.95 78.23
VIT_03s0038g03680.t01 Wine grape cytosol 63.88 60.69
GSMUA_Achr5P11110_001 Banana cytosol 55.72 57.6
TraesCS4B01G325900.2 Wheat cytosol 55.35 57.33
HORVU4Hr1G082050.15 Barley cytosol 54.99 56.74
EER92919 Sorghum cytosol 54.99 56.32
GSMUA_Achr1P02770_001 Banana extracellular, plasma membrane, vacuole 46.1 55.82
TraesCS1D01G206500.1 Wheat cytosol 56.99 55.67
Zm00001d048343_P001 Maize cytosol 53.72 55.53
Zm00001d027514_P002 Maize cytosol 53.9 55.41
TraesCS1A01G203000.1 Wheat cytosol 56.99 55.28
TraesCS1B01G217000.1 Wheat cytosol 56.99 55.28
GSMUA_Achr1P14990_001 Banana cytosol 54.81 54.51
Os03t0131300-01 Rice plasma membrane 52.81 54.49
Os10t0542200-01 Rice plasma membrane, plastid 56.62 54.26
GSMUA_Achr3P00530_001 Banana cytosol 54.45 54.25
TraesCS4D01G322800.1 Wheat cytosol 55.72 54.05
TraesCS5A01G498100.1 Wheat cytosol 55.54 53.87
HORVU1Hr1G052260.2 Barley cytosol 54.45 52.54
GSMUA_Achr7P04060_001 Banana cytosol 51.91 52.48
EER92003 Sorghum cytosol 55.17 52.41
Zm00001d047373_P001 Maize cytosol 53.72 51.39
Zm00001d029782_P004 Maize cytosol 54.81 50.93
GSMUA_Achr1P02760_001 Banana cytosol 8.35 35.66
Protein Annotations
Gene3D:1.10.8.10MapMan:19.3.4.6Gene3D:3.10.20.90EntrezGene:816225ProteinID:AAD25138.1ProteinID:AEC06597.1
ArrayExpress:AT2G17200EnsemblPlantsGene:AT2G17200RefSeq:AT2G17200TAIR:AT2G17200RefSeq:AT2G17200-TAIR-GEnsemblPlants:AT2G17200.1
TAIR:AT2G17200.1EMBL:AY035177EMBL:AY142486Unigene:At.22593Symbol:DSK2GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0005829GO:GO:0031593InterPro:IPR000626InterPro:IPR015940RefSeq:NP_179311.1
PFAM:PF00240PFAM:PF00627PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0025195
PO:PO:0025281PFscan:PS50030PFscan:PS50053PANTHER:PTHR10677PANTHER:PTHR10677:SF38UniProt:Q9SII8
SMART:SM00165SMART:SM00213SMART:SM00727SUPFAM:SSF46934SUPFAM:SSF54236InterPro:STI1_HS-bd
InterPro:UBAInterPro:UBA-like_sfUniParc:UPI00000AC6CFInterPro:UbiquilinInterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_dom
SEG:seg:::::
Description
DSK2BUbiquitin domain-containing protein DSK2b [Source:UniProtKB/Swiss-Prot;Acc:Q9SII8]
Coordinates
chr2:-:7481881..7485240
Molecular Weight (calculated)
58057.6 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.468
Length
551 amino acids
Sequence
(BLAST)
001: MGGEGDSSQP QSGEGEAVAV NIRCSNGTKF SVKTSLDSTV ESFKELVAQS SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTIHMVRGS APSSAPPPAP
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.