Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87203 | Canola | cytosol | 92.86 | 100.0 |
| Bra035939.1-P | Field mustard | cytosol | 92.21 | 99.3 |
| CDY02168 | Canola | cytosol | 90.26 | 97.2 |
| CDY23083 | Canola | cytosol | 90.26 | 97.2 |
| AT5G61170.1 | Thale cress | cytosol | 88.96 | 95.8 |
| CDY47020 | Canola | cytosol | 87.66 | 94.41 |
| CDY34702 | Canola | cytosol | 84.42 | 90.91 |
| CDY37549 | Canola | cytosol, extracellular | 84.42 | 90.91 |
| CDY43263 | Canola | cytosol | 84.42 | 90.91 |
| CDY55795 | Canola | cytosol | 84.42 | 90.91 |
| VIT_17s0000g06980.t01 | Wine grape | cytosol | 79.22 | 85.31 |
| KRG93629 | Soybean | endoplasmic reticulum | 77.92 | 83.92 |
| KRH62796 | Soybean | endoplasmic reticulum | 77.27 | 83.22 |
| KRH18402 | Soybean | nucleus | 77.27 | 83.22 |
| KRH30101 | Soybean | cytosol, endoplasmic reticulum | 77.27 | 83.22 |
| Solyc03g115360.2.1 | Tomato | nucleus | 76.62 | 82.52 |
| PGSC0003DMT400063101 | Potato | cytosol | 75.97 | 81.82 |
| Solyc12g039120.1.1 | Tomato | nucleus | 74.68 | 80.42 |
| PGSC0003DMT400041313 | Potato | cytosol | 74.68 | 80.42 |
| GSMUA_Achr6P34920_001 | Banana | cytosol | 72.08 | 78.72 |
| GSMUA_Achr9P09350_001 | Banana | cytosol | 72.08 | 78.72 |
| VIT_01s0011g00680.t01 | Wine grape | cytosol | 73.38 | 77.4 |
| CDY42857 | Canola | cytosol | 72.08 | 76.55 |
| GSMUA_Achr9P26780_001 | Banana | cytosol, plasma membrane | 72.73 | 75.68 |
| Zm00001d029543_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 69.48 | 73.79 |
| Zm00001d047296_P001 | Maize | cytosol, extracellular, mitochondrion | 68.83 | 73.1 |
| KXG39115 | Sorghum | cytosol | 68.18 | 72.41 |
| EES14121 | Sorghum | cytosol | 67.53 | 71.72 |
| GSMUA_Achr10P... | Banana | cytosol | 71.43 | 70.97 |
| TraesCS5D01G174600.1 | Wheat | cytosol | 66.88 | 66.45 |
| TraesCS5A01G170200.1 | Wheat | cytosol | 66.88 | 62.42 |
| TraesCS5B01G167000.2 | Wheat | cytosol | 66.88 | 62.42 |
| HORVU5Hr1G031630.1 | Barley | cytosol | 25.97 | 60.61 |
| HORVU6Hr1G062080.1 | Barley | cytosol | 24.03 | 58.73 |
| HORVU2Hr1G019060.1 | Barley | cytosol | 29.87 | 56.79 |
| GSMUA_Achr6P30810_001 | Banana | cytosol | 14.94 | 54.76 |
| HORVU6Hr1G064520.1 | Barley | cytosol | 27.92 | 53.75 |
| HORVU1Hr1G061060.1 | Barley | cytosol | 25.97 | 51.95 |
| HORVU5Hr1G052240.8 | Barley | plastid | 57.14 | 47.06 |
Protein Annotations
| Gene3D:1.10.10.2700 | MapMan:17.1.3.1.21 | GO:A0A078FQR5 | UniProt:A0A078FQR5 | EnsemblPlants:CDY16820 | ProteinID:CDY16820 |
| ProteinID:CDY16820.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00094705001 | InterPro:IPR038111 | PFAM:PD003854 |
| PFAM:PF01090 | ScanProsite:PS00628 | PANTHER:PTHR11710 | PANTHER:PTHR11710:SF8 | InterPro:Ribosomal_S19e | InterPro:Ribosomal_S19e_CS |
| InterPro:Ribosomal_S19e_sf | SMART:SM01413 | SUPFAM:SSF46785 | UniParc:UPI0004EEEC54 | InterPro:WH_DNA-bd_sf | : |
Description
BnaA09g05620DBnaA09g05620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQR5]
Coordinates
chrLK032067:-:506589..507922
Molecular Weight (calculated)
16981.6 Da
IEP (calculated)
10.494
GRAVY (calculated)
-0.444
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGKTVKDVS PHEFVKAYAA HLKRSGKMLN SKLEIGHEIE LPAWTDIVKT GKLKELAPYD PDWYYIRAAS MARKVYLRGG LGVGAFRRIY GGSKRNGSRP
101: PHFCKSSGGV ARHILQQLQT MNIVDLDTKG GRKITSSGER DLDQVAGRIA AEAI
101: PHFCKSSGGV ARHILQQLQT MNIVDLDTKG GRKITSSGER DLDQVAGRIA AEAI
001: MATGKTVKDV SPHDFVKAYA SHLKRSGKIE LPTWTDIVKT GKLKELAPYD PDWYYIRAAS MARKVYLRGG LGVGAFRRIY GGSKRNGSRP PHFCKSSGGI
101: ARHILQQLET MNIVELDTKG GRRITSSGQR DLDQVAGRIA VEP
101: ARHILQQLET MNIVELDTKG GRRITSSGQR DLDQVAGRIA VEP
Arabidopsis Description
RPS19A40S ribosomal protein S19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGA6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.