Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62796 | Soybean | endoplasmic reticulum | 88.81 | 88.81 |
| AT5G61170.1 | Thale cress | cytosol | 88.11 | 88.11 |
| AT3G02080.1 | Thale cress | cytosol | 88.11 | 88.11 |
| CDY37549 | Canola | cytosol, extracellular | 87.41 | 87.41 |
| KRG93629 | Soybean | endoplasmic reticulum | 87.41 | 87.41 |
| KRH30101 | Soybean | cytosol, endoplasmic reticulum | 87.41 | 87.41 |
| CDY55795 | Canola | cytosol | 87.41 | 87.41 |
| CDY43263 | Canola | cytosol | 87.41 | 87.41 |
| CDY34702 | Canola | cytosol | 87.41 | 87.41 |
| CDY23083 | Canola | cytosol | 87.41 | 87.41 |
| CDY02168 | Canola | cytosol | 87.41 | 87.41 |
| AT5G15520.1 | Thale cress | cytosol | 87.41 | 87.41 |
| Bra039150.1-P | Field mustard | cytosol | 87.41 | 87.41 |
| Bra012980.1-P | Field mustard | cytosol | 87.41 | 87.41 |
| KRH18402 | Soybean | nucleus | 86.71 | 86.71 |
| Bra021478.1-P | Field mustard | cytosol | 86.71 | 86.71 |
| VIT_01s0011g00680.t01 | Wine grape | cytosol | 88.11 | 86.3 |
| Bra001028.1-P | Field mustard | cytosol | 86.01 | 86.01 |
| Bra029331.1-P | Field mustard | cytosol | 73.43 | 85.37 |
| CDX87203 | Canola | cytosol | 85.31 | 85.31 |
| CDY47020 | Canola | cytosol | 84.62 | 84.62 |
| Solyc03g115360.2.1 | Tomato | nucleus | 84.62 | 84.62 |
| Bra035939.1-P | Field mustard | cytosol | 84.62 | 84.62 |
| PGSC0003DMT400041313 | Potato | cytosol | 83.92 | 83.92 |
| Solyc12g039120.1.1 | Tomato | nucleus | 83.92 | 83.92 |
| PGSC0003DMT400063101 | Potato | cytosol | 83.22 | 83.22 |
| GSMUA_Achr6P34920_001 | Banana | cytosol | 81.82 | 82.98 |
| GSMUA_Achr9P09350_001 | Banana | cytosol | 81.12 | 82.27 |
| GSMUA_Achr9P26780_001 | Banana | cytosol, plasma membrane | 82.52 | 79.73 |
| CDY16820 | Canola | cytosol | 85.31 | 79.22 |
| Zm00001d047296_P001 | Maize | cytosol, extracellular, mitochondrion | 79.02 | 77.93 |
| Zm00001d029543_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 77.62 | 76.55 |
| EES14121 | Sorghum | cytosol | 76.92 | 75.86 |
| KXG39115 | Sorghum | cytosol | 76.92 | 75.86 |
| GSMUA_Achr10P... | Banana | cytosol | 80.42 | 74.19 |
| CDY42857 | Canola | cytosol | 69.23 | 68.28 |
| TraesCS5D01G174600.1 | Wheat | cytosol | 73.43 | 67.74 |
| TraesCS5A01G170200.1 | Wheat | cytosol | 73.43 | 63.64 |
| TraesCS5B01G167000.2 | Wheat | cytosol | 73.43 | 63.64 |
| HORVU5Hr1G031630.1 | Barley | cytosol | 29.37 | 63.64 |
| HORVU6Hr1G062080.1 | Barley | cytosol | 27.97 | 63.49 |
| GSMUA_Achr6P30810_001 | Banana | cytosol | 17.48 | 59.52 |
| HORVU2Hr1G019060.1 | Barley | cytosol | 32.87 | 58.02 |
| HORVU6Hr1G064520.1 | Barley | cytosol | 30.77 | 55.0 |
| HORVU1Hr1G061060.1 | Barley | cytosol | 29.37 | 54.55 |
| HORVU5Hr1G052240.8 | Barley | plastid | 62.24 | 47.59 |
Protein Annotations
| Gene3D:1.10.10.2700 | EntrezGene:100255295 | wikigene:100255295 | MapMan:17.1.3.1.21 | UniProt:A5C4J2 | EMBL:AM482118 |
| ProteinID:CAN83920 | ProteinID:CAN83920.1 | ProteinID:CBI15148 | ProteinID:CBI15148.3 | EMBL:FN594950 | GO:GO:0000028 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022627 | InterPro:IPR038111 |
| EntrezGene:LOC100255295 | wikigene:LOC100255295 | PFAM:PD003854 | PFAM:PF01090 | ScanProsite:PS00628 | PANTHER:PTHR11710 |
| PANTHER:PTHR11710:SF8 | InterPro:Ribosomal_S19e | InterPro:Ribosomal_S19e_CS | InterPro:Ribosomal_S19e_sf | SMART:SM01413 | SUPFAM:SSF46785 |
| TIGR:TC53701 | TIGR:TC69812 | UniParc:UPI0001524C64 | ArrayExpress:VIT_17s0000g06980 | EnsemblPlantsGene:VIT_17s0000g06980 | EnsemblPlants:VIT_17s0000g06980.t01 |
| unigene:Vvi.7262 | InterPro:WH_DNA-bd_sf | RefSeq:XP_002284393 | RefSeq:XP_002284393.1 | : | : |
Description
No Description!
Coordinates
chr17:-:7682501..7685569
Molecular Weight (calculated)
15937.2 Da
IEP (calculated)
10.831
GRAVY (calculated)
-0.431
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MATARTVKDV SPHEFVNAYA AHLKRSGKIE LPHWTDIVKT ATFKELAPYD PDWYYIRAAS MARKIYLRGG IGVGAFRRIY GGSKRNGSRP PHFCKSSGSI
101: ARHILQQLQT MNIIELDSKG GRRITSSGQR DLDQVAGRIA VAH
101: ARHILQQLQT MNIIELDSKG GRRITSSGQR DLDQVAGRIA VAH
001: MATGKTVKDV SPHEFVKAYA AHLKRSGKIE LPLWTDIVKT GKLKELAPYD PDWYYIRAAS MARKVYLRGG LGVGAFRRIY GGSKRNGSRP PHFCKSSGGV
101: ARHILQQLQT MNIVDLDTKG GRKITSSGQR DLDQVAGRIA AAV
101: ARHILQQLQT MNIVDLDTKG GRKITSSGQR DLDQVAGRIA AAV
Arabidopsis Description
RPS19C40S ribosomal protein S19-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.