Factsheet for HORVU1Hr1G014950.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G088500.1	Wheat	nucleus	71.95	78.88
TraesCS1D01G072600.1	Wheat	nucleus	66.86	73.98
Zm00001d035457_P001	Maize	nucleus	59.77	62.99
Os05t0128000-00	Rice	nucleus	54.96	58.26
OQU77323	Sorghum	nucleus	55.24	45.77
GSMUA_Achr8P21100_001	Banana	nucleus	22.95	39.71
KRH75965	Soybean	nucleus	30.03	38.97
KRH65719	Soybean	cytosol	29.75	38.46
VIT_08s0105g00400.t01	Wine grape	nucleus	29.46	37.55
Bra005127.1-P	Field mustard	nucleus	30.59	36.99
KRH00261	Soybean	nucleus	30.59	36.99
KRH49393	Soybean	nucleus	30.31	36.77
CDX91438	Canola	nucleus	30.31	36.64
CDX74901	Canola	nucleus	30.59	36.61
AT2G38250.1	Thale cress	nucleus	29.75	36.33
CDY14474	Canola	nucleus	30.03	36.3
CDY07745	Canola	nucleus	29.75	35.71
Bra000046.1-P	Field mustard	nucleus	29.75	35.71
Bra005688.1-P	Field mustard	nucleus	28.61	35.31
Solyc09g005560.2.1	Tomato	nucleus	28.61	34.47
CDY10496	Canola	nucleus	30.59	34.07
PGSC0003DMT400077751	Potato	nucleus	28.05	33.22
AT5G01380.1	Thale cress	nucleus	30.31	33.13
CDY11203	Canola	nucleus	29.46	32.6
CDX80775	Canola	nucleus	29.46	32.6
HORVU2Hr1G101600.2	Barley	nucleus	24.65	32.34
Bra028899.1-P	Field mustard	nucleus	22.1	31.84
CDY04841	Canola	nucleus	27.76	31.61
HORVU2Hr1G084030.2	Barley	cytosol	13.03	12.74
HORVU2Hr1G046270.1	Barley	cytosol	4.25	9.55

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.20	UniProt:A0A287EPW7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G014950	EnsemblPlants:HORVU1Hr1G014950.2	InterPro:IPR017877	InterPro:Myb-like_dom	PFAM:PF13837
PFscan:PS50090	PANTHER:PTHR45378	InterPro:Trihelix_TF_GT3	UniParc:UPI000B4749E2	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:41849824..41851378

Molecular Weight (calculated)

39413.0 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.913

Length

353 amino acids

Sequence
(BLAST)

001: LSLSLVFPTL LRFPVHRHRR HHRPGQAMDP FHHLNTAFSN PYHPLLPSSP PHHHYPPPPP LQPPPAADPP ERERLPQWSH AETAAFLAIR ADLDHSFLST
101: KRNKALWEAV SARLTAHGGG FARTPDQCKS KWKNLVTRFK GTASDTHAEG GDPHVGAAAR GGFPFHDEMR RIFDARVERA RALEAKKAKG KDAAARRDPD
201: DDGGGGEGDE GEDEDEEAEV FGDEEEGRAD AEARGAGKKR RRKAAAAART AAAAGGGGIE IGEVEAVLRE FMRRQMEMEE RWMEAAEARD AERRAREEEW
301: RAAMVALGEE RLALVRRWRE REDAWRARAE EREERRHQLV AALLAKLGGD TSS

Best Arabidopsis Sequence Match ( AT5G01380.1 )
(BLAST)

001: MDRRNPFQHH HHHHQLHHHL IQQQQLPPPP LSTTATMDPG GGGGGGERIP QWSIEETKEL LAIREELDQT FMETKRNKLL WEVVAAKMAD KGFVRSAEQC
101: KSKWKNLVTR YKACETTEPD AIRQQFPFYN EIQSIFEARM QRMLWSEATE PSTSSKRKHH QFSSDDEEEE VDEPNQDINE ELLSLVETQK RETEVITTST
201: STNPRKRAKK GKGVASGTKA ETAGNTLKDI LEEFMRQTVK MEKEWRDAWE MKEIEREKRE KEWRRRMAEL EEERAATERR WMEREEERRL REEARAQKRD
301: SLIDALLNRL NRDHNDDHHN QGF

Arabidopsis Description

GT-3ATrihelix transcription factor GT-3a [Source:UniProtKB/Swiss-Prot;Acc:Q9SDW0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.