Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
23777608
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G072600.1 | Wheat | nucleus | 64.56 | 67.4 |
TraesCS1B01G088500.1 | Wheat | nucleus | 64.86 | 67.08 |
Zm00001d035457_P001 | Maize | nucleus | 57.66 | 57.31 |
HORVU1Hr1G014950.2 | Barley | mitochondrion | 58.26 | 54.96 |
OQU77323 | Sorghum | nucleus | 62.46 | 48.83 |
GSMUA_Achr8P21100_001 | Banana | nucleus | 23.72 | 38.73 |
VIT_08s0105g00400.t01 | Wine grape | nucleus | 31.83 | 38.27 |
KRH65719 | Soybean | cytosol | 31.23 | 38.1 |
KRH00261 | Soybean | nucleus | 33.33 | 38.01 |
KRH49393 | Soybean | nucleus | 32.73 | 37.46 |
AT2G38250.1 | Thale cress | nucleus | 32.43 | 37.37 |
KRH75965 | Soybean | nucleus | 30.33 | 37.13 |
CDY14474 | Canola | nucleus | 32.43 | 36.99 |
CDY07745 | Canola | nucleus | 32.13 | 36.39 |
Bra000046.1-P | Field mustard | nucleus | 32.13 | 36.39 |
Bra005127.1-P | Field mustard | nucleus | 31.83 | 36.3 |
CDX91438 | Canola | nucleus | 31.53 | 35.96 |
Solyc09g005560.2.1 | Tomato | nucleus | 31.23 | 35.49 |
CDX74901 | Canola | nucleus | 30.93 | 34.92 |
Bra028899.1-P | Field mustard | nucleus | 24.92 | 33.88 |
Bra005688.1-P | Field mustard | nucleus | 28.83 | 33.57 |
CDY10496 | Canola | nucleus | 31.83 | 33.44 |
PGSC0003DMT400077751 | Potato | nucleus | 29.73 | 33.22 |
AT5G01380.1 | Thale cress | nucleus | 31.83 | 32.82 |
CDY11203 | Canola | nucleus | 30.63 | 31.97 |
CDX80775 | Canola | nucleus | 30.63 | 31.97 |
CDY04841 | Canola | nucleus | 29.73 | 31.94 |
Os04t0602300-01 | Rice | cytosol, nucleus | 17.72 | 29.06 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.20 | EntrezGene:4337690 | ProteinID:BAF16449.1 | ProteinID:BAS92084.1 | ProteinID:EEE62197.1 |
GO:GO:0000981 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
InterPro:IPR017877 | InterPro:Myb-like_dom | EnsemblPlantsGene:Os05g0128000 | EnsemblPlants:Os05t0128000-00 | PFAM:PF13837 | PFscan:PS50090 |
PANTHER:PTHR45378 | UniProt:Q0DL24 | InterPro:Trihelix_TF_GT3 | UniParc:UPI0000E12325 | RefSeq:XP_015637590.1 | RefSeq:XP_015637591.1 |
SEG:seg | : | : | : | : | : |
Description
Homeodomain-like containing protein. (Os05t0128000-00)
Coordinates
chr5:+:1643484..1644746
Molecular Weight (calculated)
36948.8 Da
IEP (calculated)
6.159
GRAVY (calculated)
-0.936
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFHHLNSS FSNPYHPLLA SPPHHFAPDP LPPPPPPPPP PLLPADPPSL ERERLPQWSH AETAAFLAIR ADLDHSFLST KRNKALWEAA SARLHALGFA
101: RTPDQCKSKW KNLVTRFKGT EGAAAVAAAG TDQMQGGQGG GAAARGSSSS FPFHDELRRI FDARVERARA LERKKVKGKD PDDDHDGGGD GDEDDEEEAD
201: QQVDEEDDGA SGDTTRAGSK KRRRKAAAAA RRTGSTGGVE GEVEAMLREF MRRQIEMEER WMEAAEAREA ERRAREEEWR TAMVALGEER LALVRRWRER
301: EDAWRARAEE REERRHQLVA ALLAKLGAGD ASA
101: RTPDQCKSKW KNLVTRFKGT EGAAAVAAAG TDQMQGGQGG GAAARGSSSS FPFHDELRRI FDARVERARA LERKKVKGKD PDDDHDGGGD GDEDDEEEAD
201: QQVDEEDDGA SGDTTRAGSK KRRRKAAAAA RRTGSTGGVE GEVEAMLREF MRRQIEMEER WMEAAEAREA ERRAREEEWR TAMVALGEER LALVRRWRER
301: EDAWRARAEE REERRHQLVA ALLAKLGAGD ASA
001: MDGHQHHHLH QLQYLNKHHL HTQSQTPEIA SPVAVGDRFP QWSVEETKEL IGIRGELDQT FMETKRNKLL WEVISNKMRD KSFPRSPEQC KCKWKNLVTR
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
Arabidopsis Description
GT-3BTrihelix transcription factor GT-3b [Source:UniProtKB/Swiss-Prot;Acc:O80450]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.