Factsheet for HORVU7Hr1G069840.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G013370.4
HORVU7Hr1G069840.2
HORVU7Hr1G106340.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G66500.1	HORVU3Hr1G013370.4	AT1G17760.1	18479511
AT1G66500.1	HORVU7Hr1G106340.5	AT1G30460.1	18479511
AT1G66500.1	HORVU7Hr1G069840.2	AT4G04885.1	18479511
AT1G66500.1	HORVU7Hr1G069840.2	AT5G43620.1	18479511
AT4G04885.1	HORVU7Hr1G106340.5	AT1G30460.1	18479511
AT4G04885.1	HORVU7Hr1G069840.2	AT1G66500.1	18479511
AT4G04885.1	HORVU7Hr1G069840.2	AT4G04885.1	18479511
AT4G04885.1	HORVU7Hr1G069840.2	AT5G43620.1	18479511
AT5G43620.1	HORVU3Hr1G013370.4	AT1G17760.1	18479511
AT5G43620.1	HORVU7Hr1G069840.2	AT1G66500.1	18479511
AT5G43620.1	HORVU7Hr1G069840.2	AT4G04885.1	18479511

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G294500.5	Wheat	nucleus	88.39	93.03
TraesCS7D01G290300.2	Wheat	nucleus	87.98	92.7
TraesCS7B01G181900.3	Wheat	nucleus	89.51	88.08
Os08t0187700-01	Rice	cytosol	67.92	68.69
OQU80002	Sorghum	nucleus	61.41	63.14
Zm00001d049442_P009	Maize	nucleus	61.3	62.25
Zm00001d000023_P004	Maize	nucleus	60.9	62.03
VIT_18s0086g00630.t01	Wine grape	cytosol	4.28	60.0
GSMUA_Achr6P18930_001	Banana	nucleus	30.96	36.98
CDX94585	Canola	nucleus	28.51	36.84
Bra029526.1-P	Field mustard	nucleus, plastid	28.82	36.66
CDY16640	Canola	nucleus	28.62	36.3
Bra004171.1-P	Field mustard	nucleus	8.04	35.27
VIT_18s0086g00620.t01	Wine grape	extracellular	4.89	35.04
AT4G04885.1	Thale cress	nucleus	28.72	34.9
VIT_10s0116g00720.t01	Wine grape	nucleus	32.28	32.92
KRH35569	Soybean	cytosol	30.55	32.54
PGSC0003DMT400075619	Potato	nucleus	32.28	32.48
Solyc12g094490.1.1	Tomato	nucleus	31.98	32.21
KRG91241	Soybean	nucleus	30.45	31.91
KRH35574	Soybean	nucleus	12.22	29.78
CDX96143	Canola	nucleus	10.59	25.37
CDY36205	Canola	nucleus	10.79	25.36
AT5G43620.1	Thale cress	nucleus	10.18	24.39
AT1G66500.1	Thale cress	nucleus	9.78	23.08
HORVU4Hr1G001840.2	Barley	nucleus	22.91	20.27

Protein Annotations

Gene3D:1.25.40.90	MapMan:16.2.1.5.2	UniProt:A0A287WSU0	InterPro:CID_dom	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	EnsemblPlantsGene:HORVU7Hr1G069840	EnsemblPlants:HORVU7Hr1G069840.2	InterPro:IPR006569	InterPro:IPR008942
InterPro:IPR013087	PFAM:PF04818	ScanProsite:PS00028	PFscan:PS51391	PANTHER:PTHR15921	InterPro:RNA_pol_II-bd
SMART:SM00582	SUPFAM:SSF48464	SignalP:SignalP-noTM	UniParc:UPI000B484D16	InterPro:Znf_C2H2_type	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:375836726..375845902

Molecular Weight (calculated)

108844.0 Da

IEP (calculated)

7.410

GRAVY (calculated)

-0.630

Length

982 amino acids

Sequence
(BLAST)

001: KSQINPNTFP AWPCFASACL LLVASLPNPS PRRPFPETLD LPMSSAAAAA PVVGQVVERF RARLREEAGE EPKAAAVVGV YKEALAELTF NCKPIITELT
101: IIAGQHAALA ARGIADAICA RILEVPVEQK LPSLYLLDSI VKNIGREYVA DFATRLQKVF CFAYREVHPK QHPAMRHLFR TWSQVFPSSV LQGIENELQF
201: SPSENSPSEN KRPATTTIPR QSESLSPRPP HGIHVNPKYL EVQHQFKNGT KVDQLATRGR QMLDVVEDHI NGLTTNSLRG FPSTSSKLQR STILYTENPD
301: QQGTFQSHIG LVRRDMSRSP PSDVLPRNAS PKRPLEMPRL SHSVLGHDPR RLPDRNGWFE RQCSFEDGAQ RPSMSTLDEE YRKQSARELI DAYGNSQGND
401: ADERLPKMQR LESNGMAGRS SAQKWLTSEE EEYTWEDMRP TLSRNRNNIP SLPSSETSRA GFPGSNTGQL DSDVGVRSWR SQAPRPALNL EDRTGHVDIA
501: TSRRHPGNFG LHNGAISEYH SSENTLDPGR TLAMSAPPWQ QTNGLPLRMQ APQPSSTLNR LALPTDVEMP VKMLATGGTY DAMHVDLPLT NRTSPAPAPA
601: PIEWPLHHHS QPPHNTKDIR GATDTLEVRP FIRHGINSSV FVPRHLYDAL DRKTVSSGNL AQPPYHHPDL LSSSQQNQGT NFGNQSQPHD VPQFHPHSHS
701: HSPEVFRSFA PSMPVAPPQN PFQGQGGSAV VPPVPPLPNT FSATRTVQPY GVSSASSFAL PPLHRSLPPA SLQIGPSSSQ VCGPTTYFSG ILSNLMNHGV
801: ITLEPATQPQ DSVGVDFNVD LKVRNESVIN ALYQDLHRQC KTCGLRFKCQ EEHRAHMDWH VTKNRNSKNR KQSSRKYFVT VGEWLRAAET VGNDGVPSFE
901: PTEPIPDKKE EKEMSVPADE NQTTCALCQE PFEDFYSDET EEWMYKGAVY MNAPDGNIVG LQRSHLGPIV HSKCQSGPSN IS

Best Arabidopsis Sequence Match ( AT2G36480.1 )
(BLAST)

001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE

Arabidopsis Description

ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.