Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g050340.1.1 | Tomato | cytosol | 37.36 | 41.46 |
| Solyc04g050380.1.1 | Tomato | plastid | 61.54 | 39.44 |
| Solyc04g050400.1.1 | Tomato | endoplasmic reticulum, vacuole | 41.76 | 31.93 |
| Solyc04g050390.1.1 | Tomato | plastid | 48.35 | 30.56 |
| Solyc04g050370.1.1 | Tomato | cytosol | 18.68 | 25.0 |
| Solyc04g050360.1.1 | Tomato | cytosol | 10.99 | 20.0 |
| Solyc06g075180.1.1 | Tomato | nucleus | 36.26 | 19.88 |
| Solyc11g065670.1.1 | Tomato | cytosol | 36.26 | 19.88 |
| Solyc11g069440.1.1 | Tomato | nucleus, plastid | 36.26 | 19.88 |
| VIT_06s0004g02840.t01 | Wine grape | cytosol | 32.97 | 18.07 |
| VIT_08s0040g01870.t01 | Wine grape | cytosol | 32.97 | 18.07 |
| Zm00001d017719_P001 | Maize | plastid | 30.77 | 16.87 |
| TraesCS2A01G443200.1 | Wheat | cytosol | 30.77 | 16.87 |
| TraesCS2B01G464300.1 | Wheat | golgi, plastid | 30.77 | 16.87 |
| AT5G60670.1 | Thale cress | cytosol | 30.77 | 16.87 |
| TraesCS2D01G442300.1 | Wheat | cytosol | 30.77 | 16.87 |
| TraesCS6A01G268300.1 | Wheat | cytosol, nucleus | 29.67 | 16.36 |
| Os02t0699600-01 | Rice | nucleus | 29.67 | 16.27 |
| Zm00001d002450_P001 | Maize | cytosol | 29.67 | 16.27 |
| Zm00001d031348_P001 | Maize | cytosol | 29.67 | 16.27 |
| EES10673 | Sorghum | cytosol | 29.67 | 16.27 |
| EES07409 | Sorghum | cytosol | 29.67 | 16.27 |
| GSMUA_Achr10P... | Banana | cytosol | 21.98 | 16.13 |
| TraesCS6D01G246600.1 | Wheat | cytosol, golgi, nucleus, unclear | 28.57 | 15.76 |
| Zm00001d051543_P001 | Maize | plastid | 28.57 | 15.66 |
| AT3G53430.1 | Thale cress | cytosol | 28.57 | 15.66 |
| EES11363 | Sorghum | cytosol | 28.57 | 15.66 |
| AT2G37190.1 | Thale cress | cytosol | 28.57 | 15.66 |
| Solyc04g050420.1.1 | Tomato | cytosol | 21.98 | 15.62 |
| Os04t0598200-00 | Rice | cytosol, extracellular, nucleus, plastid | 27.47 | 15.06 |
| Zm00001d003896_P001 | Maize | plastid | 26.37 | 14.46 |
| HORVU2Hr1G102610.1 | Barley | cytosol, mitochondrion | 29.67 | 14.14 |
| HORVU6Hr1G067870.1 | Barley | cytosol, plastid | 29.67 | 13.85 |
| Zm00001d043268_P001 | Maize | cytosol | 28.57 | 12.81 |
| Zm00001d010017_P001 | Maize | cytosol | 30.77 | 12.5 |
| TraesCS6B01G295500.1 | Wheat | cytosol | 10.99 | 7.87 |
| Solyc04g050410.1.1 | Tomato | cytosol | 1.1 | 2.13 |
Protein Annotations
| Gene3D:1.10.10.250 | Gene3D:3.40.640.10 | MapMan:35.2 | GO:GO:0000027 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0003824 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0019843 | GO:GO:0022625 | InterPro:IPR015421 | InterPro:IPR036769 | UniProt:K4BS15 | PFAM:PF00298 |
| PANTHER:PTHR11661 | PANTHER:PTHR11661:SF2 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | InterPro:Ribosomal_L11/L12 | InterPro:Ribosomal_L11_C |
| InterPro:Ribosomal_L11_C_sf | SUPFAM:SSF46906 | SUPFAM:SSF53383 | EnsemblPlantsGene:Solyc04g050430.1 | EnsemblPlants:Solyc04g050430.1.1 | UniParc:UPI0002766BF0 |
Description
No Description!
Coordinates
chr4:-:47075133..47075497
Molecular Weight (calculated)
10499.0 Da
IEP (calculated)
9.713
GRAVY (calculated)
-0.331
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MSIMEMSHCG KEFFSIIQKE ESDLRTLLNI SDKYTVLFLQ GESILVIKAL KEPKRERKKM KNIKHNGNIS PDVVIEIAKV MQPRSMANDF S
001: MAATTNSFLV GSNNTQIPAL KPKSSSQSFL HLSKPNTVNF VSKTKPVAVR CVASTTQVQD GVRSGSVGSQ ERVFNFAAGP ATLPENVLLK AQADLYNWRG
101: SGMSVMEMSH RGKEFLSIIQ KAESDLRQLL EIPQEYSVLF LQGGATTQFA ALPLNLCKSD DTVDFVVTGS WGDKAVKEAK KYCKTNVIWS GKSEKYTKVP
201: SFEELEQTPD AKYLHICANE TIHGVEFKDY PVPKNGFLVA DMSSNFCSKP VDVSKFGVIY GGAQKNVGPS GVTIVIIRKD LIGNAQDITP VMLDYKIHDE
301: NSSLYNTPPC FGIYMCGLVF EDLLEQGGLK EVEKKNQRKA DLLYNAIEES NGFFRCPVEK SVRSLMNVPF TLEKSELEAE FIKEAAKEKM VQLKGHRSVG
401: GMRASIYNAM PLAGVEKLVA FMKDFQAKHA
101: SGMSVMEMSH RGKEFLSIIQ KAESDLRQLL EIPQEYSVLF LQGGATTQFA ALPLNLCKSD DTVDFVVTGS WGDKAVKEAK KYCKTNVIWS GKSEKYTKVP
201: SFEELEQTPD AKYLHICANE TIHGVEFKDY PVPKNGFLVA DMSSNFCSKP VDVSKFGVIY GGAQKNVGPS GVTIVIIRKD LIGNAQDITP VMLDYKIHDE
301: NSSLYNTPPC FGIYMCGLVF EDLLEQGGLK EVEKKNQRKA DLLYNAIEES NGFFRCPVEK SVRSLMNVPF TLEKSELEAE FIKEAAKEKM VQLKGHRSVG
401: GMRASIYNAM PLAGVEKLVA FMKDFQAKHA
Arabidopsis Description
PSAT1Phosphoserine aminotransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96255]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.