Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069440.1.1 | Tomato | nucleus, plastid | 100.0 | 100.0 |
| PGSC0003DMT400083480 | Potato | cytosol | 99.4 | 99.4 |
| Solyc06g075180.1.1 | Tomato | nucleus | 98.19 | 98.19 |
| VIT_13s0019g04300.t01 | Wine grape | cytosol | 94.58 | 94.58 |
| KRH19864 | Soybean | endoplasmic reticulum | 93.98 | 93.98 |
| KRH32476 | Soybean | endoplasmic reticulum | 93.37 | 93.37 |
| KRH29917 | Soybean | endoplasmic reticulum, nucleus | 93.37 | 93.37 |
| KRH25012 | Soybean | cytosol, endoplasmic reticulum, nucleus | 92.77 | 92.77 |
| GSMUA_Achr4P09610_001 | Banana | cytosol | 76.51 | 92.7 |
| Zm00001d002450_P001 | Maize | cytosol | 92.17 | 92.17 |
| GSMUA_Achr10P... | Banana | cytosol | 92.17 | 92.17 |
| TraesCS6B01G295500.1 | Wheat | cytosol | 70.48 | 92.13 |
| Zm00001d017719_P001 | Maize | plastid | 91.57 | 91.57 |
| GSMUA_Achr8P23840_001 | Banana | cytosol | 91.57 | 91.57 |
| Zm00001d051543_P001 | Maize | plastid | 91.57 | 91.57 |
| EES10673 | Sorghum | cytosol | 91.57 | 91.57 |
| Os02t0699600-01 | Rice | nucleus | 91.57 | 91.57 |
| EES07409 | Sorghum | cytosol | 91.57 | 91.57 |
| EES11363 | Sorghum | cytosol | 90.96 | 90.96 |
| TraesCS2A01G443200.1 | Wheat | cytosol | 90.96 | 90.96 |
| TraesCS2B01G464300.1 | Wheat | golgi, plastid | 90.96 | 90.96 |
| TraesCS2D01G442300.1 | Wheat | cytosol | 90.96 | 90.96 |
| TraesCS6A01G268300.1 | Wheat | cytosol, nucleus | 90.36 | 90.91 |
| Zm00001d003896_P001 | Maize | plastid | 90.36 | 90.36 |
| Os04t0598200-00 | Rice | cytosol, extracellular, nucleus, plastid | 90.36 | 90.36 |
| TraesCS6D01G246600.1 | Wheat | cytosol, golgi, nucleus, unclear | 89.76 | 90.3 |
| AT2G37190.1 | Thale cress | cytosol | 87.95 | 87.95 |
| AT3G53430.1 | Thale cress | cytosol | 87.35 | 87.35 |
| AT5G60670.1 | Thale cress | cytosol | 87.35 | 87.35 |
| Zm00001d031348_P001 | Maize | cytosol | 86.75 | 86.75 |
| Solyc04g050360.1.1 | Tomato | cytosol | 25.3 | 84.0 |
| Solyc04g050370.1.1 | Tomato | cytosol | 33.73 | 82.35 |
| HORVU2Hr1G102610.1 | Barley | cytosol, mitochondrion | 90.36 | 78.53 |
| HORVU6Hr1G067870.1 | Barley | cytosol, plastid | 90.36 | 76.92 |
| GSMUA_Achr6P03690_001 | Banana | cytosol | 74.7 | 71.68 |
| GSMUA_Achr7P19710_001 | Banana | cytosol | 76.51 | 67.2 |
| Solyc04g050410.1.1 | Tomato | cytosol | 17.47 | 61.7 |
| Zm00001d010017_P001 | Maize | cytosol | 72.29 | 53.57 |
| Solyc04g050400.1.1 | Tomato | endoplasmic reticulum, vacuole | 36.14 | 50.42 |
| Zm00001d043268_P001 | Maize | cytosol | 59.64 | 48.77 |
| Solyc04g050380.1.1 | Tomato | plastid | 39.16 | 45.77 |
| Solyc04g050420.1.1 | Tomato | cytosol | 34.34 | 44.53 |
| Solyc04g050390.1.1 | Tomato | plastid | 38.55 | 44.44 |
| Solyc04g050340.1.1 | Tomato | cytosol | 19.88 | 40.24 |
| Solyc04g050430.1.1 | Tomato | cytosol | 19.88 | 36.26 |
Protein Annotations
| Gene3D:1.10.10.250 | MapMan:17.1.2.1.12 | Gene3D:3.30.1550.10 | GO:GO:0000027 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019843 |
| GO:GO:0022625 | GO:GO:0030529 | InterPro:IPR036769 | InterPro:IPR036796 | UniProt:K4DAA0 | HAMAP:MF_00736 |
| PFAM:PF00298 | PFAM:PF03946 | ScanProsite:PS00359 | PANTHER:PTHR11661 | PANTHER:PTHR11661:SF2 | InterPro:Ribosomal_L11/L12 |
| InterPro:Ribosomal_L11/L12_N_sf | InterPro:Ribosomal_L11_C | InterPro:Ribosomal_L11_CS | InterPro:Ribosomal_L11_C_sf | InterPro:Ribosomal_L11_N | SMART:SM00649 |
| SUPFAM:SSF46906 | SUPFAM:SSF54747 | EnsemblPlantsGene:Solyc11g065670.1 | EnsemblPlants:Solyc11g065670.1.1 | UniParc:UPI0002769AFB | : |
Description
No Description!
Coordinates
chr11:-:51213870..51214370
Molecular Weight (calculated)
17795.6 Da
IEP (calculated)
9.220
GRAVY (calculated)
-0.330
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPKFDPSQV VEVFVRVTGG EVGAASSLAP KIGPLGLSPK KIGEDIAKET SKDWKGLRVT VKLTVQNRQA KVSVVPSAAA LVIKALKEPE RDRKKTKNIK
101: HNGNISLDDV IEIAKVMQPR SMAKDLSGTV KEILGTCVSV GCTVDGKDPK DLQQEISDGD VEIPEN
101: HNGNISLDDV IEIAKVMQPR SMAKDLSGTV KEILGTCVSV GCTVDGKDPK DLQQEISDGD VEIPEN
001: MPPKLDPSQI VDVYVRVTGG EVGAASSLAP KIGPLGLAPK KIGEDIAKET AKEWKGLRVT VKLTVQNRQA KVTVVPSAAA LVIKALKEPE RDRKKVKNIK
101: HNGNISFDDV TEIARIMRPR SIAKELSGTV REILGTCVSV GCTVDGKDPK DIQQEIQDGE VEIPEN
101: HNGNISFDDV TEIARIMRPR SIAKELSGTV REILGTCVSV GCTVDGKDPK DIQQEIQDGE VEIPEN
Arabidopsis Description
RPL12A60S ribosomal protein L12-1 [Source:UniProtKB/Swiss-Prot;Acc:P50883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.