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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G246600.1 Wheat cytosol, golgi, nucleus, unclear 100.0 76.97
TraesCS6A01G268300.1 Wheat cytosol, nucleus 99.21 76.36
Zm00001d051543_P001 Maize plastid 96.85 74.1
Zm00001d017719_P001 Maize plastid 96.85 74.1
Zm00001d003896_P001 Maize plastid 96.85 74.1
Zm00001d002450_P001 Maize cytosol 96.85 74.1
EES11363 Sorghum cytosol 96.85 74.1
EES10673 Sorghum cytosol 96.85 74.1
TraesCS2B01G464300.1 Wheat golgi, plastid 96.85 74.1
EES07409 Sorghum cytosol 96.85 74.1
Os04t0598200-00 Rice cytosol, extracellular, nucleus, plastid 94.49 72.29
Os02t0699600-01 Rice nucleus 94.49 72.29
VIT_06s0004g02840.t01 Wine grape cytosol 92.91 71.08
VIT_08s0040g01870.t01 Wine grape cytosol 92.91 71.08
AT2G37190.1 Thale cress cytosol 92.91 71.08
AT3G53430.1 Thale cress cytosol 92.13 70.48
CDY70392 Canola cytosol 92.13 70.48
PGSC0003DMT400008687 Potato cytosol 92.13 70.48
PGSC0003DMT400020871 Potato cytosol 92.13 70.48
PGSC0003DMT400083480 Potato cytosol 92.13 70.48
Solyc06g075180.1.1 Tomato nucleus 92.13 70.48
Solyc11g065670.1.1 Tomato cytosol 92.13 70.48
Solyc11g069440.1.1 Tomato nucleus, plastid 92.13 70.48
CDX76214 Canola cytosol 92.13 70.48
Bra039787.1-P Field mustard cytosol 92.13 70.48
CDY46760 Canola cytosol 92.13 70.48
Bra039782.1-P Field mustard cytosol 92.13 70.48
Bra023104.1-P Field mustard cytosol 92.13 70.48
Bra017204.1-P Field mustard cytosol 92.13 70.48
CDY30876 Canola cytosol 92.13 70.48
CDY56698 Canola cytosol 91.34 69.88
CDY13296 Canola cytosol 91.34 69.88
KRH32476 Soybean endoplasmic reticulum 91.34 69.88
KRH29917 Soybean endoplasmic reticulum, nucleus 91.34 69.88
KRH25012 Soybean cytosol, endoplasmic reticulum, nucleus 91.34 69.88
VIT_13s0019g04300.t01 Wine grape cytosol 91.34 69.88
CDY52760 Canola cytosol 91.34 69.88
KRH19864 Soybean endoplasmic reticulum 90.55 69.28
GSMUA_Achr8P23840_001 Banana cytosol 90.55 69.28
Bra003134.1-P Field mustard cytosol 90.55 69.28
Zm00001d031348_P001 Maize cytosol 90.55 69.28
AT5G60670.1 Thale cress cytosol 90.55 69.28
CDX78178 Canola cytosol, extracellular 90.55 69.28
CDY31522 Canola cytosol 89.76 68.67
Bra006998.1-P Field mustard cytosol 89.76 68.67
Bra002460.1-P Field mustard cytosol 89.76 68.67
GSMUA_Achr10P... Banana cytosol 89.76 68.67
CDY53628 Canola cytosol 88.98 68.07
CDY27019 Canola cytosol 88.19 67.07
HORVU6Hr1G067870.1 Barley cytosol, plastid 99.21 64.62
CDX91342 Canola cytosol 26.77 64.15
GSMUA_Achr4P09610_001 Banana cytosol 68.5 63.5
Bra005214.1-P Field mustard nucleus 33.07 50.6
CDX74982 Canola nucleus 33.07 50.6
GSMUA_Achr6P03690_001 Banana cytosol 68.5 50.29
Solyc04g050370.1.1 Tomato cytosol 26.77 50.0
GSMUA_Achr7P19710_001 Banana cytosol 68.5 46.03
Zm00001d010017_P001 Maize cytosol 70.87 40.18
Solyc04g050410.1.1 Tomato cytosol 13.39 36.17
Solyc04g050360.1.1 Tomato cytosol 13.39 34.0
Zm00001d043268_P001 Maize cytosol 54.33 33.99
Solyc04g050420.1.1 Tomato cytosol 30.71 30.47
Solyc04g050400.1.1 Tomato endoplasmic reticulum, vacuole 22.05 23.53
GSMUA_Achr10P... Banana cytosol 21.26 21.77
Solyc04g050380.1.1 Tomato plastid 22.05 19.72
Solyc04g050390.1.1 Tomato plastid 21.26 18.75
Solyc04g050430.1.1 Tomato cytosol 7.87 10.99
Solyc04g050340.1.1 Tomato cytosol 6.3 9.76
Protein Annotations
Gene3D:1.10.10.250MapMan:17.1.2.1.12Gene3D:3.30.1550.10GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:IPR036769
InterPro:IPR036796PFAM:PF03946PANTHER:PTHR11661PANTHER:PTHR11661:SF2InterPro:Ribosomal_L11/L12InterPro:Ribosomal_L11/L12_N_sf
InterPro:Ribosomal_L11_C_sfInterPro:Ribosomal_L11_NSMART:SM00649SUPFAM:SSF54747EnsemblPlantsGene:TraesCS6B01G295500EnsemblPlants:TraesCS6B01G295500.1
Description
No Description!
Coordinates
chr6B:+:530572828..530573325
Molecular Weight (calculated)
13588.5 Da
IEP (calculated)
9.852
GRAVY (calculated)
-0.398
Length
127 amino acids
Sequence
(BLAST)
001: MPPKLDPSQI VEVYVRVTGG EVGAASSLAP KIGPLGLSPK KIGEDIAKET AKDWKGLRVT VKLTVQNRQA KVSVVPSAAA LVIKALKEPE RDRKKVKNIK
101: HSGCTVDGKD PKDLQTEIDD GEVEIPA
Best Arabidopsis Sequence Match ( AT2G37190.1 )
(BLAST)
001: MPPKLDPSQI VDVYVRVTGG EVGAASSLAP KIGPLGLAPK KIGEDIAKET AKEWKGLRVT VKLTVQNRQA KVTVVPSAAA LVIKALKEPE RDRKKVKNIK
101: HNGNISFDDV TEIARIMRPR SIAKELSGTV REILGTCVSV GCTVDGKDPK DIQQEIQDGE VEIPEN
Arabidopsis Description
RPL12A60S ribosomal protein L12-1 [Source:UniProtKB/Swiss-Prot;Acc:P50883]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.