Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G443200.1 | Wheat | cytosol | 86.39 | 99.4 |
| TraesCS2B01G464300.1 | Wheat | golgi, plastid | 86.39 | 99.4 |
| TraesCS2D01G442300.1 | Wheat | cytosol | 86.39 | 99.4 |
| EES07409 | Sorghum | cytosol | 82.72 | 95.18 |
| EES10673 | Sorghum | cytosol | 82.72 | 95.18 |
| Zm00001d002450_P001 | Maize | cytosol | 82.72 | 95.18 |
| Zm00001d051543_P001 | Maize | plastid | 82.2 | 94.58 |
| EES11363 | Sorghum | cytosol | 82.2 | 94.58 |
| Os04t0598200-00 | Rice | cytosol, extracellular, nucleus, plastid | 81.68 | 93.98 |
| Zm00001d017719_P001 | Maize | plastid | 81.68 | 93.98 |
| Os02t0699600-01 | Rice | nucleus | 81.15 | 93.37 |
| Zm00001d003896_P001 | Maize | plastid | 81.15 | 93.37 |
| VIT_08s0040g01870.t01 | Wine grape | cytosol | 79.06 | 90.96 |
| VIT_06s0004g02840.t01 | Wine grape | cytosol | 79.06 | 90.96 |
| PGSC0003DMT400008687 | Potato | cytosol | 78.53 | 90.36 |
| Solyc06g075180.1.1 | Tomato | nucleus | 78.53 | 90.36 |
| Solyc11g065670.1.1 | Tomato | cytosol | 78.53 | 90.36 |
| Solyc11g069440.1.1 | Tomato | nucleus, plastid | 78.53 | 90.36 |
| PGSC0003DMT400083480 | Potato | cytosol | 78.53 | 90.36 |
| VIT_13s0019g04300.t01 | Wine grape | cytosol | 78.53 | 90.36 |
| PGSC0003DMT400020871 | Potato | cytosol | 78.53 | 90.36 |
| Zm00001d031348_P001 | Maize | cytosol | 78.01 | 89.76 |
| GSMUA_Achr8P23840_001 | Banana | cytosol | 76.96 | 88.55 |
| GSMUA_Achr10P... | Banana | cytosol | 76.44 | 87.95 |
| AT2G37190.1 | Thale cress | cytosol | 76.44 | 87.95 |
| CDY70392 | Canola | cytosol | 76.44 | 87.95 |
| CDY46760 | Canola | cytosol | 76.44 | 87.95 |
| CDY30876 | Canola | cytosol | 76.44 | 87.95 |
| CDX76214 | Canola | cytosol | 76.44 | 87.95 |
| Bra039787.1-P | Field mustard | cytosol | 76.44 | 87.95 |
| Bra039782.1-P | Field mustard | cytosol | 76.44 | 87.95 |
| Bra023104.1-P | Field mustard | cytosol | 76.44 | 87.95 |
| Bra017204.1-P | Field mustard | cytosol | 76.44 | 87.95 |
| AT5G60670.1 | Thale cress | cytosol | 76.44 | 87.95 |
| KRH19864 | Soybean | endoplasmic reticulum | 75.92 | 87.35 |
| AT3G53430.1 | Thale cress | cytosol | 75.92 | 87.35 |
| CDY13296 | Canola | cytosol | 75.92 | 87.35 |
| CDY52760 | Canola | cytosol | 75.92 | 87.35 |
| CDY56698 | Canola | cytosol | 75.92 | 87.35 |
| GSMUA_Achr4P09610_001 | Banana | cytosol | 62.3 | 86.86 |
| KRH29917 | Soybean | endoplasmic reticulum, nucleus | 75.39 | 86.75 |
| Bra002460.1-P | Field mustard | cytosol | 75.39 | 86.75 |
| Bra003134.1-P | Field mustard | cytosol | 75.39 | 86.75 |
| CDX78178 | Canola | cytosol, extracellular | 75.39 | 86.75 |
| CDY31522 | Canola | cytosol | 75.39 | 86.75 |
| KRH25012 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.39 | 86.75 |
| KRH32476 | Soybean | endoplasmic reticulum | 75.39 | 86.75 |
| Bra006998.1-P | Field mustard | cytosol | 74.87 | 86.14 |
| CDY53628 | Canola | cytosol | 74.87 | 86.14 |
| CDY27019 | Canola | cytosol | 74.35 | 85.03 |
| HORVU6Hr1G067870.1 | Barley | cytosol, plastid | 85.34 | 83.59 |
| Solyc04g050370.1.1 | Tomato | cytosol | 27.23 | 76.47 |
| Solyc04g050360.1.1 | Tomato | cytosol | 18.85 | 72.0 |
| GSMUA_Achr6P03690_001 | Banana | cytosol | 61.78 | 68.21 |
| CDX91342 | Canola | cytosol | 17.8 | 64.15 |
| GSMUA_Achr7P19710_001 | Banana | cytosol | 62.3 | 62.96 |
| Solyc04g050410.1.1 | Tomato | cytosol | 14.14 | 57.45 |
| Zm00001d010017_P001 | Maize | cytosol | 64.92 | 55.36 |
| CDX74982 | Canola | nucleus | 21.99 | 50.6 |
| Bra005214.1-P | Field mustard | nucleus | 21.99 | 50.6 |
| Zm00001d043268_P001 | Maize | cytosol | 53.4 | 50.25 |
| Solyc04g050400.1.1 | Tomato | endoplasmic reticulum, vacuole | 27.75 | 44.54 |
| Solyc04g050420.1.1 | Tomato | cytosol | 27.75 | 41.41 |
| Solyc04g050380.1.1 | Tomato | plastid | 29.32 | 39.44 |
| Solyc04g050390.1.1 | Tomato | plastid | 28.8 | 38.19 |
| Solyc04g050340.1.1 | Tomato | cytosol | 14.14 | 32.93 |
| GSMUA_Achr10P... | Banana | cytosol | 19.9 | 30.65 |
| Solyc04g050430.1.1 | Tomato | cytosol | 14.14 | 29.67 |
Protein Annotations
| Gene3D:1.10.10.250 | MapMan:17.1.2.1.12 | Gene3D:3.30.1550.10 | UniProt:A0A287J8A4 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030529 | EnsemblPlantsGene:HORVU2Hr1G102610 | EnsemblPlants:HORVU2Hr1G102610.1 | InterPro:IPR036769 | InterPro:IPR036796 | HAMAP:MF_00736 |
| PFAM:PF00298 | PFAM:PF03946 | ScanProsite:PS00359 | PANTHER:PTHR11661 | PANTHER:PTHR11661:SF2 | InterPro:Ribosomal_L11/L12 |
| InterPro:Ribosomal_L11/L12_N_sf | InterPro:Ribosomal_L11_C | InterPro:Ribosomal_L11_CS | InterPro:Ribosomal_L11_C_sf | InterPro:Ribosomal_L11_N | SMART:SM00649 |
| SUPFAM:SSF46906 | SUPFAM:SSF54747 | UniParc:UPI000B477D99 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:697191404..697193301
Molecular Weight (calculated)
18813.9 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.246
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXAAAAAR HRPATMPPKL DPSQVVEVYV RVTGGEVGAA SSLAPKIGPL GLSPKKIGED IAKETAKDWK GLRVTVKLTV QNRQAKVSVV
101: PSAAALVIKS LKEPERDRKK VKNIKHNGNI SLDDVIEIAK IMKTRSMAKE MAGTVKEILG TCVSVGCTVD GKDPKDLQTE IDDGEVEIPS A
101: PSAAALVIKS LKEPERDRKK VKNIKHNGNI SLDDVIEIAK IMKTRSMAKE MAGTVKEILG TCVSVGCTVD GKDPKDLQTE IDDGEVEIPS A
001: MPPKLDPSQI VDVYVRVTGG EVGAASSLAP KIGPLGLAPK KIGEDIAKET AKEWKGLRVT VKLTVQNRQA KVTVVPSAAA LVIKALKEPE RDRKKVKNIK
101: HNGNISFDDV TEIARIMRPR SIAKELSGTV REILGTCVSV GCTVDGKDPK DIQQEIQDGE VEIPEN
101: HNGNISFDDV TEIARIMRPR SIAKELSGTV REILGTCVSV GCTVDGKDPK DIQQEIQDGE VEIPEN
Arabidopsis Description
RPL12A60S ribosomal protein L12-1 [Source:UniProtKB/Swiss-Prot;Acc:P50883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.