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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G023990.18 Barley cytosol, peroxisome, plastid 79.47 90.24
HORVU7Hr1G024070.1 Barley cytosol 20.53 89.58
TraesCS7B01G010000.2 Wheat nucleus 94.99 86.52
EER87870 Sorghum nucleus 70.64 70.81
Zm00001d045309_P001 Maize nucleus 68.74 68.74
Zm00001d036228_P001 Maize cytosol 39.62 66.14
Os06t0154900-01 Rice nucleus 41.53 65.91
HORVU4Hr1G034450.1 Barley cytosol 26.97 57.95
CDY64724 Canola cytosol 27.45 51.8
GSMUA_Achr10P... Banana nucleus 48.21 51.79
GSMUA_AchrUn_... Banana nucleus 46.78 47.0
TraesCS6D01G176900.1 Wheat cytosol 47.49 46.82
VIT_19s0093g00620.t01 Wine grape nucleus 43.91 46.82
GSMUA_Achr2P20090_001 Banana nucleus 47.02 46.68
GSMUA_Achr3P17550_001 Banana nucleus 45.82 46.38
TraesCS7D01G489000.1 Wheat cytosol 15.99 45.58
Solyc07g056630.2.1 Tomato nucleus 45.58 45.26
Bra025999.1-P Field mustard nucleus 35.56 45.15
CDY65128 Canola nucleus 35.32 44.71
CDY48470 Canola nucleus 34.61 44.07
KRH13587 Soybean nucleus 44.87 43.93
AT1G17145.1 Thale cress nucleus 35.08 43.88
KRH21787 Soybean nucleus 44.87 43.62
CDY26864 Canola nucleus 38.66 43.43
CDY26863 Canola nucleus 38.66 43.43
CDX79263 Canola cytosol 13.84 43.28
Bra008360.1-P Field mustard nucleus 38.66 43.2
CDX88446 Canola nucleus 38.9 40.95
CDY52445 Canola nucleus 39.14 40.29
Bra035036.1-P Field mustard nucleus 39.14 40.29
AT1G78420.1 Thale cress nucleus 38.19 39.9
CDX68014 Canola cytosol 10.98 37.1
Protein Annotations
EnsemblPlants:TraesCS7D01G107500.1EnsemblPlantsGene:TraesCS7D01G107500ncoils:CoilPANTHER:PTHR31315PANTHER:PTHR31315:SF2SEG:seg
MapMan:19.2.2.1.5.3.6:::::
Description
No Description!
Coordinates
chr7D:+:64683849..64688590
Molecular Weight (calculated)
44846.6 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.435
Length
419 amino acids
Sequence
(BLAST)
001: MGNRVGGRRR RPPVDERYTA PQGLYPHPDI DLKKLRRLIL EAKLAPCHPG ADDPRPDLDE CPICFLFYPS LNRSKCCAKG ICTECFLQMK SPTSCRPTQC
101: PYCKMLNYAV EYRGVKTKEE KGVEQIEEQR VIEAQIRMRH QELQDDAERL KNKQVAASTD EVAIARVEPC DTGGTSTPAA SAAQGNDAVS GQVQHSELLL
201: KNAERLRQLR DNNFDMDLEE VMLMEAIWLS VQDQEALGNP GSIGAVPPTL PLRCYDASGA ASAEAAPPGG FACAVAALAE QQHMLGDPSS TATCQASRHD
301: ILSRSQRSFT EDLSIAGSSA SATRVEEPSN GRTPQARDGA DYSNNDGWSE AAEASTSCAG SDVTVEAGAA SVAAAASDVS SIGSGNVPDS FEEQMMLAMA
401: LSLVDARGVG GSPPGLAWR
Best Arabidopsis Sequence Match ( AT1G17145.1 )
(BLAST)
001: MGNKLGRKRQ IVDERYTKPQ QGLYMSKDVD IKKLKKLILE SKLAPCYPGL EETPSSHHDL EECPICFLYY PSLNRSRCCM KSICTECFLR MKSPNSAQPT
101: QCPFCKTSNY AVEYRGGKTK EEKSFEQIEE QRVIEAKIRM RQKEVEDDEE RMQKRLESYS SSSSTSAATL DTEYGSAAED DEEIVSSQES CLPSHHPQVT
201: RDGQFDFDLE DIMVMEAIWL SMQEPGIQRN TSPDDISEKD RNEEPSTPSS SSPSGGLACA IAVLAERQQM VGVSSSNQNV NLASQNLVPD NGNNSHYNAI
301: EQDSNHYLQG AGISYTRSDM TDDSGGETSR EVTWQ
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q940G8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.