Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G024070.1 | Barley | cytosol | 26.69 | 69.79 |
| Os06t0154900-01 | Rice | nucleus | 62.55 | 59.47 |
| Zm00001d046859_P001 | Maize | nucleus | 21.91 | 48.25 |
| CDY64724 | Canola | cytosol | 42.63 | 48.2 |
| Zm00001d046846_P001 | Maize | cytosol | 21.12 | 46.49 |
| EER87870 | Sorghum | nucleus | 75.3 | 45.22 |
| Zm00001d045309_P001 | Maize | nucleus | 74.5 | 44.63 |
| HORVU4Hr1G034450.1 | Barley | cytosol | 31.87 | 41.03 |
| TraesCS7D01G107500.1 | Wheat | nucleus | 66.14 | 39.62 |
| TraesCS7B01G010000.2 | Wheat | nucleus | 65.74 | 35.87 |
| CDX79263 | Canola | cytosol | 17.53 | 32.84 |
| CDX68014 | Canola | cytosol | 15.94 | 32.26 |
| AT1G17145.1 | Thale cress | nucleus | 41.04 | 30.75 |
| HORVU7Hr1G023990.18 | Barley | cytosol, peroxisome, plastid | 45.02 | 30.62 |
| VIT_19s0093g00620.t01 | Wine grape | nucleus | 47.01 | 30.03 |
| GSMUA_Achr10P... | Banana | nucleus | 46.22 | 29.74 |
| Bra025999.1-P | Field mustard | nucleus | 38.65 | 29.39 |
| CDY65128 | Canola | nucleus | 38.65 | 29.31 |
| CDY48470 | Canola | nucleus | 38.25 | 29.18 |
| Zm00001d053448_P001 | Maize | nucleus | 49.8 | 29.0 |
| CDY26864 | Canola | nucleus | 43.03 | 28.95 |
| CDY26863 | Canola | nucleus | 43.03 | 28.95 |
| Bra008360.1-P | Field mustard | nucleus | 43.03 | 28.8 |
| Solyc07g056630.2.1 | Tomato | nucleus | 48.21 | 28.67 |
| Zm00001d016164_P003 | Maize | nucleus | 49.4 | 28.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.22 | 27.82 |
| GSMUA_Achr3P17550_001 | Banana | nucleus | 45.82 | 27.78 |
| CDX88446 | Canola | nucleus | 43.03 | 27.14 |
| KRH21787 | Soybean | nucleus | 46.22 | 26.91 |
| KRH13587 | Soybean | nucleus | 45.82 | 26.87 |
| AT1G78420.1 | Thale cress | nucleus | 42.63 | 26.68 |
| GSMUA_Achr2P20090_001 | Banana | nucleus | 44.62 | 26.54 |
| CDY52445 | Canola | nucleus | 42.23 | 26.04 |
| Bra035036.1-P | Field mustard | nucleus | 42.23 | 26.04 |
Protein Annotations
| EnsemblPlants:Zm00001d036228_P001 | EnsemblPlants:Zm00001d036228_T001 | EnsemblPlantsGene:Zm00001d036228 | ncoils:Coil | PANTHER:PTHR31315 | PANTHER:PTHR31315:SF2 |
| ProteinID:AQK80468.1 | SEG:seg | UniParc:UPI000845691F | UniProt:A0A1D6LLA3 | MapMan:19.2.2.1.5.3.6 | : |
Description
GW2
Coordinates
chr6:+:77985437..77990162
Molecular Weight (calculated)
28115.4 Da
IEP (calculated)
7.820
GRAVY (calculated)
-0.574
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEAVANEIR FRGSGNLKPT RENRGERGYG EPGRGPAADE RYTRPQGLYP HPDIDLRKLR RLILEAKLAP CHPGADDARA DLDECPICFL FYPSLNRSKC
101: CAKGICTECF LQMKSPTSCR PTQCPYCKTL NYAVEYRGVK TMEEKGIEQL EEQRVIEAQI RMRRQELQDD AERMKNKQAA PLSDVVASAQ VDSCSTDGAS
201: TVAASSPRGN DALSSEVQRS ELILRNSEVF QQRRFSFVGS IVIIVALNYW G
101: CAKGICTECF LQMKSPTSCR PTQCPYCKTL NYAVEYRGVK TMEEKGIEQL EEQRVIEAQI RMRRQELQDD AERMKNKQAA PLSDVVASAQ VDSCSTDGAS
201: TVAASSPRGN DALSSEVQRS ELILRNSEVF QQRRFSFVGS IVIIVALNYW G
001: MGNKLGRKRQ IVDERYTKPQ QGLYMSKDVD IKKLKKLILE SKLAPCYPGL EETPSSHHDL EECPICFLYY PSLNRSRCCM KSICTECFLR MKSPNSAQPT
101: QCPFCKTSNY AVEYRGGKTK EEKSFEQIEE QRVIEAKIRM RQKEVEDDEE RMQKRLESYS SSSSTSAATL DTEYGSAAED DEEIVSSQES CLPSHHPQVT
201: RDGQFDFDLE DIMVMEAIWL SMQEPGIQRN TSPDDISEKD RNEEPSTPSS SSPSGGLACA IAVLAERQQM VGVSSSNQNV NLASQNLVPD NGNNSHYNAI
301: EQDSNHYLQG AGISYTRSDM TDDSGGETSR EVTWQ
101: QCPFCKTSNY AVEYRGGKTK EEKSFEQIEE QRVIEAKIRM RQKEVEDDEE RMQKRLESYS SSSSTSAATL DTEYGSAAED DEEIVSSQES CLPSHHPQVT
201: RDGQFDFDLE DIMVMEAIWL SMQEPGIQRN TSPDDISEKD RNEEPSTPSS SSPSGGLACA IAVLAERQQM VGVSSSNQNV NLASQNLVPD NGNNSHYNAI
301: EQDSNHYLQG AGISYTRSDM TDDSGGETSR EVTWQ
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q940G8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.