Factsheet for Bra004995.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000157.1-P	Field mustard	plastid	94.2	94.2
CDX74814	Canola	cytosol, plastid	92.15	93.43
AT2G39990.1	Thale cress	plastid	90.78	90.78
VIT_13s0019g03470.t01	Wine grape	cytosol	74.74	76.84
KRG97767	Soybean	endoplasmic reticulum	74.4	75.43
KRH31118	Soybean	endoplasmic reticulum	74.06	75.35
PGSC0003DMT400069899	Potato	cytosol	70.99	72.98
Solyc05g052690.2.1	Tomato	cytosol	70.99	72.98
Solyc11g013440.1.1	Tomato	plastid	69.97	71.93
KRH14986	Soybean	endoplasmic reticulum	70.31	71.28
KRH73154	Soybean	endoplasmic reticulum	69.97	70.93
Os05t0104800-01	Rice	nucleus	65.53	67.61
KXG22419	Sorghum	plastid	65.19	66.55
Zm00001d011100_P002	Maize	plastid	64.85	66.2
TraesCS6D01G078000.1	Wheat	plastid	64.16	64.38
TraesCS6A01G090300.1	Wheat	golgi	63.82	64.04
TraesCS6B01G112400.2	Wheat	plastid	63.48	63.7
GSMUA_Achr9P28480_001	Banana	cytosol	63.48	63.48
GSMUA_Achr6P05250_001	Banana	cytosol, plastid	63.14	63.14
PGSC0003DMT400071416	Potato	cytosol	62.12	62.98
Zm00001d035752_P002	Maize	plastid	63.82	61.31
GSMUA_Achr2P16050_001	Banana	cytosol	23.89	60.34
GSMUA_Achr2P16060_001	Banana	cytosol	25.26	60.16
HORVU6Hr1G014610.1	Barley	plastid	63.48	59.81
Bra009133.1-P	Field mustard	cytosol	24.23	23.05
Bra005867.1-P	Field mustard	cytosol, nucleus, vacuole	24.23	23.05
Bra028748.1-P	Field mustard	cytosol, nucleus, plastid	23.89	22.73
Bra019106.1-P	Field mustard	plastid	23.89	22.01
Bra026439.1-P	Field mustard	plastid	23.21	21.38
Bra002827.1-P	Field mustard	plastid	21.84	20.38
Bra017408.1-P	Field mustard	cytosol	20.48	19.48
Bra032422.1-P	Field mustard	cytosol, nucleus, plastid	16.38	16.05
Bra006369.1-P	Field mustard	cytosol	19.8	14.46

Protein Annotations

MapMan:17.4.1.3.6	Gene3D:3.40.140.10	EnsemblPlantsGene:Bra004995	EnsemblPlants:Bra004995.1	EnsemblPlants:Bra004995.1-P	GO:GO:0001731
GO:GO:0001732	GO:GO:0002183	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005852	GO:GO:0006412	GO:GO:0006413	GO:GO:0006446	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016282	GO:GO:0019538
GO:GO:0033290	InterPro:IPR037518	InterPro:JAMM/MPN+_dom	UniProt:M4CLA8	HAMAP:MF_03005	InterPro:MPN
PFAM:PF01398	PFAM:PF13012	PFscan:PS50249	PANTHER:PTHR10540	PANTHER:PTHR10540:SF6	InterPro:Rpn11/EIF3F_C
SMART:SM00232	UniParc:UPI00025472F0	InterPro:eIF3f	SEG:seg	:	:

Description

AT2G39990 (E=7e-133) EIF2 | EIF2; translation initiation factor

Coordinates

chrA05:+:2869464..2870782

Molecular Weight (calculated)

31966.1 Da

IEP (calculated)

4.594

GRAVY (calculated)

0.015

Length

293 amino acids

Sequence
(BLAST)

001: MAAANEHTVL QFATPSSTTS ATTSILTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NPKEIIVGWY STGLGVNGGS ALIHDFYARE VTNPIHLTVD TGFTNGEGAI KAFVSSNLSL GDRQLAAQFQ EVPVDLRMVE AERVGYDVLK ATAVDKLPND
201: MEGMELTMER LLSLINDVYK YVDSVVEGQT PPDNNIGRFI AEAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML

Best Arabidopsis Sequence Match ( AT2G39990.1 )
(BLAST)

001: MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML

Arabidopsis Description

TIF3F1Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:O04202]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.