Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069899 | Potato | cytosol | 82.81 | 82.81 |
| Solyc05g052690.2.1 | Tomato | cytosol | 81.4 | 81.4 |
| Solyc11g013440.1.1 | Tomato | plastid | 80.35 | 80.35 |
| KRH31118 | Soybean | endoplasmic reticulum | 80.7 | 79.86 |
| KRG97767 | Soybean | endoplasmic reticulum | 79.65 | 78.55 |
| KRH73154 | Soybean | endoplasmic reticulum | 79.3 | 78.2 |
| KRH14986 | Soybean | endoplasmic reticulum | 78.6 | 77.51 |
| CDX74814 | Canola | cytosol, plastid | 76.49 | 75.43 |
| CDY65775 | Canola | cytosol, plastid | 76.14 | 75.09 |
| Bra004995.1-P | Field mustard | plastid | 76.84 | 74.74 |
| AT2G39990.1 | Thale cress | plastid | 75.79 | 73.72 |
| CDY24934 | Canola | plastid | 75.79 | 73.72 |
| Bra000157.1-P | Field mustard | plastid | 75.79 | 73.72 |
| CDY60991 | Canola | plastid | 75.09 | 73.04 |
| Os05t0104800-01 | Rice | nucleus | 71.93 | 72.18 |
| PGSC0003DMT400071416 | Potato | cytosol | 72.28 | 71.28 |
| KXG22419 | Sorghum | plastid | 71.58 | 71.08 |
| GSMUA_Achr9P28480_001 | Banana | cytosol | 72.28 | 70.31 |
| Zm00001d011100_P002 | Maize | plastid | 70.53 | 70.03 |
| GSMUA_Achr6P05250_001 | Banana | cytosol, plastid | 71.23 | 69.28 |
| TraesCS6A01G090300.1 | Wheat | golgi | 69.82 | 68.15 |
| TraesCS6D01G078000.1 | Wheat | plastid | 69.82 | 68.15 |
| TraesCS6B01G112400.2 | Wheat | plastid | 69.47 | 67.81 |
| GSMUA_Achr2P16060_001 | Banana | cytosol | 28.42 | 65.85 |
| Zm00001d035752_P002 | Maize | plastid | 69.47 | 64.92 |
| HORVU6Hr1G014610.1 | Barley | plastid | 69.12 | 63.34 |
| GSMUA_Achr2P16050_001 | Banana | cytosol | 24.56 | 60.34 |
| VIT_02s0025g01490.t01 | Wine grape | cytosol | 29.12 | 26.77 |
| VIT_08s0007g01980.t01 | Wine grape | cytosol | 28.77 | 26.45 |
| VIT_03s0017g00150.t01 | Wine grape | nucleus | 8.42 | 24.74 |
| VIT_07s0005g03000.t01 | Wine grape | nucleus | 8.42 | 24.74 |
| VIT_19s0015g01950.t01 | Wine grape | plastid | 23.86 | 21.45 |
Protein Annotations
| EntrezGene:100249540 | wikigene:100249540 | MapMan:17.4.1.3.6 | Gene3D:3.40.140.10 | ProteinID:CBI31529 | ProteinID:CBI31529.3 |
| UniProt:D7TMG2 | EMBL:FN595998 | GO:GO:0000003 | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006446 | GO:GO:0007275 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009744 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016282 | GO:GO:0019538 | GO:GO:0031369 | GO:GO:0033290 | GO:GO:0071541 | InterPro:IPR037518 |
| InterPro:JAMM/MPN+_dom | EntrezGene:LOC100249540 | wikigene:LOC100249540 | MEROPS:M67.974 | HAMAP:MF_03005 | InterPro:MPN |
| PFAM:PF01398 | PFAM:PF13012 | PFscan:PS50249 | PANTHER:PTHR10540 | PANTHER:PTHR10540:SF6 | InterPro:Rpn11/EIF3F_C |
| SMART:SM00232 | TIGR:TC63559 | UniParc:UPI00015CA059 | ArrayExpress:VIT_13s0019g03470 | EnsemblPlantsGene:VIT_13s0019g03470 | EnsemblPlants:VIT_13s0019g03470.t01 |
| unigene:Vvi.1047 | RefSeq:XP_002279347 | RefSeq:XP_002279347.1 | InterPro:eIF3f | SEG:seg | : |
Description
Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/TrEMBL;Acc:D7TMG2]
Coordinates
chr13:-:4550268..4557794
Molecular Weight (calculated)
31415.5 Da
IEP (calculated)
4.629
GRAVY (calculated)
0.011
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSESAVLQ FFPSSTSLSA KVHPLVIFNI CDCYVRRPDQ AERVIGTLLG SISPDGTVDI RNSYAVPHNE SSDQVALDID YHHNMLLSHQ KVNPKEVIVG
101: WYSTGLGVTG GSALIHEFYS REVQNPIHLT VDTTFRNGEA TIKAFVSVSL SLGERQLAAQ FQEIPLDLRM VEAERVGFDI LKTTMVEKLP SDLEGMEASM
201: ERLLALIDDV YKYVDSVVEG QVVPDNDIGR FIADTVASIP KISPPAFDRL VNDSLQDHLL LLYLSSITRT QLSLAEKLNT AAQIP
101: WYSTGLGVTG GSALIHEFYS REVQNPIHLT VDTTFRNGEA TIKAFVSVSL SLGERQLAAQ FQEIPLDLRM VEAERVGFDI LKTTMVEKLP SDLEGMEASM
201: ERLLALIDDV YKYVDSVVEG QVVPDNDIGR FIADTVASIP KISPPAFDRL VNDSLQDHLL LLYLSSITRT QLSLAEKLNT AAQIP
001: MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
Arabidopsis Description
TIF3F1Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:O04202]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.