Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000157.1-P | Field mustard | plastid | 98.63 | 98.63 |
| CDY24934 | Canola | plastid | 98.29 | 98.29 |
| AT2G39990.1 | Thale cress | plastid | 91.47 | 91.47 |
| CDY65775 | Canola | cytosol, plastid | 88.74 | 89.97 |
| CDX74814 | Canola | cytosol, plastid | 86.69 | 87.89 |
| VIT_13s0019g03470.t01 | Wine grape | cytosol | 73.04 | 75.09 |
| KRH31118 | Soybean | endoplasmic reticulum | 73.38 | 74.65 |
| KRG97767 | Soybean | endoplasmic reticulum | 73.38 | 74.39 |
| Solyc11g013440.1.1 | Tomato | plastid | 69.97 | 71.93 |
| PGSC0003DMT400069899 | Potato | cytosol | 69.62 | 71.58 |
| Solyc05g052690.2.1 | Tomato | cytosol | 69.28 | 71.23 |
| KRH14986 | Soybean | endoplasmic reticulum | 69.97 | 70.93 |
| KRH73154 | Soybean | endoplasmic reticulum | 69.62 | 70.59 |
| Os05t0104800-01 | Rice | nucleus | 65.19 | 67.25 |
| KXG22419 | Sorghum | plastid | 64.16 | 65.51 |
| Zm00001d011100_P002 | Maize | plastid | 63.82 | 65.16 |
| GSMUA_Achr6P05250_001 | Banana | cytosol, plastid | 63.82 | 63.82 |
| TraesCS6D01G078000.1 | Wheat | plastid | 63.48 | 63.7 |
| GSMUA_Achr9P28480_001 | Banana | cytosol | 63.48 | 63.48 |
| TraesCS6A01G090300.1 | Wheat | golgi | 63.14 | 63.36 |
| TraesCS6B01G112400.2 | Wheat | plastid | 62.8 | 63.01 |
| PGSC0003DMT400071416 | Potato | cytosol | 62.12 | 62.98 |
| Zm00001d035752_P002 | Maize | plastid | 62.8 | 60.33 |
| GSMUA_Achr2P16060_001 | Banana | cytosol | 24.91 | 59.35 |
| HORVU6Hr1G014610.1 | Barley | plastid | 62.8 | 59.16 |
| GSMUA_Achr2P16050_001 | Banana | cytosol | 23.21 | 58.62 |
| CDY04967 | Canola | cytosol | 24.23 | 23.05 |
| CDY14102 | Canola | cytosol | 24.23 | 23.05 |
| CDX70129 | Canola | cytosol, nucleus, vacuole | 23.89 | 22.73 |
| CDX80973 | Canola | cytosol, nucleus, vacuole | 23.89 | 22.73 |
| CDY11340 | Canola | extracellular | 23.89 | 22.73 |
| CDX98863 | Canola | cytosol | 23.55 | 22.4 |
| CDY06213 | Canola | cytosol | 13.31 | 22.29 |
| CDY17426 | Canola | cytosol, nucleus, plastid | 20.82 | 22.26 |
| CDY04139 | Canola | cytosol | 21.16 | 21.99 |
| CDY42737 | Canola | plastid | 22.87 | 21.07 |
| CDX94336 | Canola | plastid | 22.87 | 21.07 |
| CDX89337 | Canola | plastid | 22.87 | 21.07 |
| CDY32798 | Canola | plastid | 22.18 | 20.7 |
| CDY49389 | Canola | plastid | 21.84 | 20.13 |
| CDX92773 | Canola | plastid | 22.18 | 18.47 |
| CDX70711 | Canola | cytosol | 7.17 | 16.54 |
| CDX78706 | Canola | cytosol | 19.45 | 14.5 |
Protein Annotations
| MapMan:17.4.1.3.6 | Gene3D:3.40.140.10 | GO:A0A078J868 | UniProt:A0A078J868 | EnsemblPlants:CDY60991 | ProteinID:CDY60991 |
| ProteinID:CDY60991.1 | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006446 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSBRNA2T00030380001 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom |
| HAMAP:MF_03005 | InterPro:MPN | PFAM:PF01398 | PFAM:PF13012 | PFscan:PS50249 | PANTHER:PTHR10540 |
| PANTHER:PTHR10540:SF6 | InterPro:Rpn11/EIF3F_C | SMART:SM00232 | UniParc:UPI0004EEDE5D | InterPro:eIF3f | SEG:seg |
Description
BnaA03g56560DEukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/TrEMBL;Acc:A0A078J868]
Coordinates
chrLK033943:+:18140..20311
Molecular Weight (calculated)
31981.1 Da
IEP (calculated)
4.674
GRAVY (calculated)
0.001
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATNEHTVL QFIAPSSTAS TTTQVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NPKEVIVGWY STGAGVNGGS ALIHDFFARE ATNPIHLTVD TGFTNGEGTI KAYVSSNLSL GDRQLAAQFQ EIPVDLRMVE AERVGYDVLK ATAVDKLPND
201: MEGIELTMER LLTLINDVYK YVDSVVEGKT SPDNNIGRFI AEAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
101: NPKEVIVGWY STGAGVNGGS ALIHDFFARE ATNPIHLTVD TGFTNGEGTI KAYVSSNLSL GDRQLAAQFQ EIPVDLRMVE AERVGYDVLK ATAVDKLPND
201: MEGIELTMER LLTLINDVYK YVDSVVEGKT SPDNNIGRFI AEAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
001: MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
Arabidopsis Description
TIF3F1Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:O04202]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.