Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74814 | Canola | cytosol, plastid | 92.39 | 92.39 |
| CDY24934 | Canola | plastid | 89.97 | 88.74 |
| CDY60991 | Canola | plastid | 89.97 | 88.74 |
| AT2G39990.1 | Thale cress | plastid | 87.89 | 86.69 |
| KRH31118 | Soybean | endoplasmic reticulum | 76.82 | 77.08 |
| VIT_13s0019g03470.t01 | Wine grape | cytosol | 75.09 | 76.14 |
| KRG97767 | Soybean | endoplasmic reticulum | 75.09 | 75.09 |
| PGSC0003DMT400069899 | Potato | cytosol | 71.28 | 72.28 |
| Solyc05g052690.2.1 | Tomato | cytosol | 70.93 | 71.93 |
| Solyc11g013440.1.1 | Tomato | plastid | 70.24 | 71.23 |
| KRH14986 | Soybean | endoplasmic reticulum | 70.93 | 70.93 |
| KRH73154 | Soybean | endoplasmic reticulum | 70.59 | 70.59 |
| Os05t0104800-01 | Rice | nucleus | 65.4 | 66.55 |
| KXG22419 | Sorghum | plastid | 65.4 | 65.85 |
| Zm00001d011100_P002 | Maize | plastid | 65.05 | 65.51 |
| GSMUA_Achr9P28480_001 | Banana | cytosol | 64.36 | 63.48 |
| TraesCS6A01G090300.1 | Wheat | golgi | 64.01 | 63.36 |
| GSMUA_Achr6P05250_001 | Banana | cytosol, plastid | 64.01 | 63.14 |
| TraesCS6B01G112400.2 | Wheat | plastid | 63.67 | 63.01 |
| TraesCS6D01G078000.1 | Wheat | plastid | 63.67 | 63.01 |
| PGSC0003DMT400071416 | Potato | cytosol | 62.28 | 62.28 |
| Zm00001d035752_P002 | Maize | plastid | 64.01 | 60.66 |
| GSMUA_Achr2P16060_001 | Banana | cytosol | 25.61 | 60.16 |
| GSMUA_Achr2P16050_001 | Banana | cytosol | 23.88 | 59.48 |
| HORVU6Hr1G014610.1 | Barley | plastid | 62.63 | 58.2 |
| CDY04967 | Canola | cytosol | 25.26 | 23.7 |
| CDY14102 | Canola | cytosol | 25.26 | 23.7 |
| CDX70129 | Canola | cytosol, nucleus, vacuole | 24.91 | 23.38 |
| CDX80973 | Canola | cytosol, nucleus, vacuole | 24.91 | 23.38 |
| CDY11340 | Canola | extracellular | 24.91 | 23.38 |
| CDX98863 | Canola | cytosol | 24.57 | 23.05 |
| CDY17426 | Canola | cytosol, nucleus, plastid | 21.45 | 22.63 |
| CDY04139 | Canola | cytosol | 21.8 | 22.34 |
| CDX94336 | Canola | plastid | 23.88 | 21.7 |
| CDX89337 | Canola | plastid | 23.53 | 21.38 |
| CDY42737 | Canola | plastid | 23.53 | 21.38 |
| CDY32798 | Canola | plastid | 22.49 | 20.7 |
| CDY06213 | Canola | cytosol | 12.46 | 20.57 |
| CDY49389 | Canola | plastid | 22.49 | 20.44 |
| CDX92773 | Canola | plastid | 22.84 | 18.75 |
| CDX70711 | Canola | cytosol | 6.92 | 15.75 |
| CDX78706 | Canola | cytosol | 19.38 | 14.25 |
Protein Annotations
| MapMan:17.4.1.3.6 | Gene3D:3.40.140.10 | GO:A0A078JH45 | UniProt:A0A078JH45 | EnsemblPlants:CDY65775 | ProteinID:CDY65775 |
| ProteinID:CDY65775.1 | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006446 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSBRNA2T00048203001 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom |
| HAMAP:MF_03005 | InterPro:MPN | PFAM:PF01398 | PFAM:PF13012 | PFscan:PS50249 | PANTHER:PTHR10540 |
| PANTHER:PTHR10540:SF6 | InterPro:Rpn11/EIF3F_C | SMART:SM00232 | UniParc:UPI0001BA615E | InterPro:eIF3f | SEG:seg |
Description
BnaC04g53310DEukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/TrEMBL;Acc:A0A078JH45]
Coordinates
chrLK034945:-:19617..21412
Molecular Weight (calculated)
31644.8 Da
IEP (calculated)
4.674
GRAVY (calculated)
0.020
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAANEHTVL QFATPSSTTS ILTARIHPLV IFNVCDCFVR RPDSAERVIG TLLGSILPDG TVDIRNSYAV PHNESSDQVA VDIDYHHNML ASHLKVNPKE
101: IIVGWYSTGL GVNGGSALIH DFYAREATNP IHLTVDTGFT NGEGAIKAFV SSNLSLGDRQ LAAQFQEVPV DLRMVEAERV GYDVLKATAV DKLPNDMEGM
201: ELTLERLLTL INDVYKYVDS VVEGQRLPDN NIGRFIAEAV ASLPKLPPQV FDNLVNDSLQ DQLLLLYLSS ITRTQLSLAE KLNTAAQML
101: IIVGWYSTGL GVNGGSALIH DFYAREATNP IHLTVDTGFT NGEGAIKAFV SSNLSLGDRQ LAAQFQEVPV DLRMVEAERV GYDVLKATAV DKLPNDMEGM
201: ELTLERLLTL INDVYKYVDS VVEGQRLPDN NIGRFIAEAV ASLPKLPPQV FDNLVNDSLQ DQLLLLYLSS ITRTQLSLAE KLNTAAQML
001: MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
101: NSKETIVGWY STGAGVNGGS SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD AERVGFDVLK ATSVDKLPND
201: LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML
Arabidopsis Description
TIF3F1Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:O04202]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.