Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005381.1-P | Field mustard | nucleus | 45.43 | 43.67 |
| AT2G34920.2 | Thale cress | nucleus | 41.57 | 38.89 |
| Bra039871.1-P | Field mustard | nucleus | 39.33 | 34.9 |
| Bra023148.1-P | Field mustard | nucleus | 36.12 | 31.91 |
| VIT_01s0010g00340.t01 | Wine grape | nucleus | 24.4 | 20.85 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 17.66 | 20.26 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 20.55 | 17.61 |
| KRH37161 | Soybean | nucleus | 25.52 | 17.25 |
| Solyc10g005220.2.1 | Tomato | nucleus, plastid | 24.88 | 16.45 |
| HORVU2Hr1G048520.1 | Barley | plastid | 16.85 | 16.33 |
| PGSC0003DMT400029374 | Potato | nucleus, plastid | 25.68 | 16.23 |
| KRH12155 | Soybean | nucleus | 23.76 | 16.14 |
| TraesCS2A01G229600.2 | Wheat | nucleus, plastid | 17.66 | 14.88 |
| TraesCS2D01G233500.1 | Wheat | cytosol, plastid | 17.34 | 14.27 |
| PGSC0003DMT400035458 | Potato | nucleus | 23.43 | 14.11 |
| TraesCS2B01G251300.1 | Wheat | nucleus, plastid | 16.37 | 13.9 |
| Bra013447.1-P | Field mustard | nucleus | 27.13 | 13.67 |
| EER99396 | Sorghum | plastid | 16.69 | 13.47 |
| Os07t0499800-01 | Rice | nucleus | 15.89 | 13.16 |
| Solyc02g082100.2.1 | Tomato | vacuole | 22.63 | 13.08 |
| Zm00001d021532_P001 | Maize | cytosol, plastid | 16.21 | 13.07 |
| Zm00001d006417_P002 | Maize | plastid | 11.56 | 12.27 |
| Bra034121.1-P | Field mustard | nucleus | 11.88 | 9.25 |
| Bra029846.1-P | Field mustard | nucleus | 10.59 | 8.54 |
| Bra009452.1-P | Field mustard | nucleus | 11.08 | 8.24 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 9.95 | 8.12 |
| Os03t0107500-00 | Rice | plasma membrane | 2.57 | 4.38 |
Protein Annotations
Description
AT2G34920 (E=1e-097) EDA18 | EDA18 (embryo sac development arrest 18); protein binding / zinc ion binding
Coordinates
chrA04:-:15287491..15290067
Molecular Weight (calculated)
70890.0 Da
IEP (calculated)
7.215
GRAVY (calculated)
-0.857
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSQVEIA SLRSNFGCLL RDCNRRNNND DAIVKKNLHA QVKSPVISDK NSQNRVGSWK GNKPRKKSKS RLGSPEKPRV GKESNFSDRT KPSLLQIWEA
101: RLSPSNGGNS PIYGQGTERS VGASVREETN LSAPSIDGES ESENESRDHD PTVEIESETL HSVPDSGESK WGRVAEIIRR LKLTAGDNVG AVEKTSLPEK
201: SIFPVVSSPR LRGRQAFTDL LTRLERERHR ELESLLERNA VSKFPQRGRL QSMLRLRSLK RGLVIQDRHR SSAKSPDLNR LEHGPTVLHL RERFRANATS
301: STERSSLPNR KTEEAMLCKK ETESNLSCLH MQEIILPEAL SRNSDNNSPS TSVTHRESQI MENMVESGTQ GSQETPFLEK QETSHRWEEQ EEYEEEQSCY
401: GEMSYYDWFT EISRPRTYWE DLRKSRYLEV MNSRSDKDDI CRLLERRTVS DFLQSGLRDT IDKLIMSRVQ TRPIQRIHQA GKEEQNCDVS EEEDDLSHTS
501: SQTFASSPAG SWSSQDTGVT STPDLLLPLH NLQTTEMEII SEMRSQILQL QLEMSELRDS VKTCLDVNAS LQKSVHRENP LKRICCVCNE TQVDTLLYSS
601: TVARLRFGSA SRIHIHSLYC RNN
101: RLSPSNGGNS PIYGQGTERS VGASVREETN LSAPSIDGES ESENESRDHD PTVEIESETL HSVPDSGESK WGRVAEIIRR LKLTAGDNVG AVEKTSLPEK
201: SIFPVVSSPR LRGRQAFTDL LTRLERERHR ELESLLERNA VSKFPQRGRL QSMLRLRSLK RGLVIQDRHR SSAKSPDLNR LEHGPTVLHL RERFRANATS
301: STERSSLPNR KTEEAMLCKK ETESNLSCLH MQEIILPEAL SRNSDNNSPS TSVTHRESQI MENMVESGTQ GSQETPFLEK QETSHRWEEQ EEYEEEQSCY
401: GEMSYYDWFT EISRPRTYWE DLRKSRYLEV MNSRSDKDDI CRLLERRTVS DFLQSGLRDT IDKLIMSRVQ TRPIQRIHQA GKEEQNCDVS EEEDDLSHTS
501: SQTFASSPAG SWSSQDTGVT STPDLLLPLH NLQTTEMEII SEMRSQILQL QLEMSELRDS VKTCLDVNAS LQKSVHRENP LKRICCVCNE TQVDTLLYSS
601: TVARLRFGSA SRIHIHSLYC RNN
001: MASLRPSFGS VLRDRNQRHN DDVVFKKNLK AQVKTAPPAI SDESSENRVD SLIGNKRKKN NKSRPGSPEK PRTRKGNNFS DNLGGASSLV QIWEARLNRS
101: NGGNSAIHSQ SIEISSEASV QEIHLLAPSI DGESESENES KSPDQTVEIE SGTLNSVSDI IRRLSNEQKL TASNNGGAVD MPIVKTPTLE KSSFQVVTCS
201: PRIRGRQAYS DLLVHLERER HRELESLLGR NAVSRFPQRG RLQSMLRLRS LKRGLAIQDR HRGTTKSDLN RFQPSSTILH LREKLREKAA NAAAEAGLKK
301: GQQSTVETES MQSKETSGIL HSPSTERLSP QKRNIEEAIL RKNETETKMS YLQLKKAIVA EVLERESDNT SPLTSVTPQE PRILRNEEAG KLESGTEGTQ
401: ETPFLETQEM SFQSGWEEQE EYEDEQSYYG DMSYDWFTEI SRPRTYWEDL RKSRYLEVMN TKSDKDDICR LLERRTVSGF LQSGLREKID KLIMSRVQIH
501: PAHRIEEATK EEEKYDIGEE KDEDRDDLSQ SSSQIFAPSP AGSWSSLDTG VTSTPTHNLH STEMEIISEM RSHILQLQLE MSELRDSVKT CLDVNASLQK
601: SVHLENPFKR KCCVCNETQV ETLLYRCGHM CTCLRCANEL QYNGGKCPIC HAKILDVVRV FVDSRT
101: NGGNSAIHSQ SIEISSEASV QEIHLLAPSI DGESESENES KSPDQTVEIE SGTLNSVSDI IRRLSNEQKL TASNNGGAVD MPIVKTPTLE KSSFQVVTCS
201: PRIRGRQAYS DLLVHLERER HRELESLLGR NAVSRFPQRG RLQSMLRLRS LKRGLAIQDR HRGTTKSDLN RFQPSSTILH LREKLREKAA NAAAEAGLKK
301: GQQSTVETES MQSKETSGIL HSPSTERLSP QKRNIEEAIL RKNETETKMS YLQLKKAIVA EVLERESDNT SPLTSVTPQE PRILRNEEAG KLESGTEGTQ
401: ETPFLETQEM SFQSGWEEQE EYEDEQSYYG DMSYDWFTEI SRPRTYWEDL RKSRYLEVMN TKSDKDDICR LLERRTVSGF LQSGLREKID KLIMSRVQIH
501: PAHRIEEATK EEEKYDIGEE KDEDRDDLSQ SSSQIFAPSP AGSWSSLDTG VTSTPTHNLH STEMEIISEM RSHILQLQLE MSELRDSVKT CLDVNASLQK
601: SVHLENPFKR KCCVCNETQV ETLLYRCGHM CTCLRCANEL QYNGGKCPIC HAKILDVVRV FVDSRT
Arabidopsis Description
EDA18RING/U-box superfamily protein [Source:TAIR;Acc:AT2G34920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.