Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29667 | Canola | cytosol | 26.32 | 4.31 |
| Solyc09g055670.1.1 | Tomato | cytosol | 10.53 | 3.23 |
| CDX98180 | Canola | mitochondrion | 21.05 | 2.21 |
| KRH64858 | Soybean | nucleus | 42.11 | 2.09 |
| CDY11166 | Canola | cytosol | 15.79 | 1.9 |
| Zm00001d010455_P013 | Maize | plastid | 36.84 | 1.87 |
| KRH09568 | Soybean | nucleus | 36.84 | 1.83 |
| PGSC0003DMT400096244 | Potato | mitochondrion | 21.05 | 1.68 |
| KRH40636 | Soybean | nucleus | 36.84 | 1.68 |
| Os05t0315200-01 | Rice | plasma membrane | 36.84 | 1.67 |
| KRH00520 | Soybean | nucleus | 36.84 | 1.65 |
| TraesCS1D01G124900.2 | Wheat | nucleus | 36.84 | 1.62 |
| TraesCS1A01G128300.1 | Wheat | cytosol, plastid | 36.84 | 1.62 |
| CDY23991 | Canola | plastid | 26.32 | 1.56 |
| PGSC0003DMT400071259 | Potato | extracellular, golgi | 15.79 | 1.55 |
| Solyc10g074800.1.1 | Tomato | nucleus, plastid | 26.32 | 1.53 |
| TraesCS1B01G146700.2 | Wheat | mitochondrion | 36.84 | 1.53 |
| PGSC0003DMT400071236 | Potato | nucleus, plastid | 26.32 | 1.52 |
| CDX84826 | Canola | plastid | 26.32 | 1.48 |
| CDY63845 | Canola | nucleus | 26.32 | 1.43 |
| CDX90224 | Canola | nucleus | 26.32 | 1.42 |
| VIT_08s0056g00430.t01 | Wine grape | nucleus | 31.58 | 1.41 |
| GSMUA_Achr8P21430_001 | Banana | mitochondrion | 31.58 | 1.32 |
| CDX99879 | Canola | mitochondrion | 26.32 | 1.26 |
| CDY26298 | Canola | nucleus | 26.32 | 1.25 |
| CDX90923 | Canola | nucleus, plastid | 21.05 | 1.22 |
| CDY17988 | Canola | nucleus | 21.05 | 1.19 |
| GSMUA_Achr3P09690_001 | Banana | mitochondrion | 26.32 | 1.18 |
| OQU77734 | Sorghum | nucleus, plastid | 15.79 | 1.02 |
Protein Annotations
| EnsemblPlants:CDY11165 | EnsemblPlantsGene:GSBRNA2T00049177001 | ProteinID:CDY11165 | ProteinID:CDY11165.1 | UniParc:UPI0004EED36F | UniProt:A0A078F9P8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g00010DBnaA03g00010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9P8]
Coordinates
chrLK032010:-:2381..2540
Molecular Weight (calculated)
2163.5 Da
IEP (calculated)
4.104
GRAVY (calculated)
-0.705
Length
19 amino acids
Sequence
(BLAST)
(BLAST)
1: MQDEGSDEVT HKSTLLYPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.