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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana nucleus 70.18 68.06
Bra011388.1-P Field mustard nucleus 40.95 66.03
PGSC0003DMT400075574 Potato nucleus 59.35 66.01
Solyc12g095890.1.1 Tomato nucleus 58.75 65.24
OQU76574 Sorghum nucleus 62.17 60.29
Zm00001d036977_P001 Maize nucleus 61.57 59.12
Os02t0227400-01 Rice extracellular 53.26 58.85
GSMUA_Achr9P16270_001 Banana nucleus 67.95 57.25
VIT_11s0016g03040.t01 Wine grape nucleus 50.74 57.19
CDX68897 Canola nucleus 60.98 56.69
CDX75292 Canola nucleus 61.13 56.52
HORVU7Hr1G088370.13 Barley nucleus 60.83 56.47
TraesCS7D01G365600.4 Wheat nucleus 60.68 56.34
TraesCS7B01G270600.4 Wheat nucleus 60.53 56.28
TraesCS7A01G357100.1 Wheat nucleus 60.83 56.16
Zm00001d053559_P007 Maize mitochondrion 56.97 56.06
KRH62113 Soybean nucleus 60.09 55.63
KRH52804 Soybean nucleus 60.09 55.33
KXG29853 Sorghum mitochondrion 56.68 54.73
AT4G32850.8 Thale cress nucleus 60.83 53.59
CDX77017 Canola nucleus 59.5 53.4
HORVU6Hr1G040920.3 Barley mitochondrion, nucleus 53.86 53.15
TraesCS6D01G174400.1 Wheat cytosol, mitochondrion 54.75 52.64
CDY35331 Canola nucleus 59.05 52.23
Solyc08g066200.2.1 Tomato nucleus 60.83 52.1
TraesCS6A01G191200.1 Wheat cytosol, mitochondrion 53.56 51.72
Bra034276.1-P Field mustard cytosol 58.9 51.49
TraesCS6B01G219800.3 Wheat cytosol, mitochondrion 53.12 51.07
Zm00001d046255_P035 Maize nucleus 61.42 50.18
AT2G25850.2 Thale cress nucleus 58.9 49.62
GSMUA_AchrUn_... Banana nucleus 51.04 46.3
GSMUA_Achr8P29920_001 Banana cytosol, golgi, plastid 26.85 32.5
Protein Annotations
Gene3D:1.10.1410.10MapMan:16.2.1.1.1Gene3D:3.30.460.10Gene3D:3.30.70.590GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004652GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016740GO:GO:0016779GO:GO:0031123GO:GO:0043631
GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr6G14860_001EnsemblPlants:GSMUA_Achr6P14860_001EnsemblPlants:GSMUA_Achr6T14860_001UniProt:M0T734InterPro:NuclTrfase_I-like_C
PFAM:PF01909PFAM:PF04926PFAM:PF04928PIRSF:PIRSF018425PANTHER:PTHR10682PANTHER:PTHR10682:SF29
InterPro:PolA_pol_RNA-bd_domInterPro:PolA_pol_cen_domInterPro:PolyA_polymeraseInterPro:Polymerase_NTP_transf_domSUPFAM:SSF55003SUPFAM:SSF81301
SUPFAM:SSF81631UniParc:UPI0002957D4E::::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G14860_001]
Coordinates
chr6:-:9872050..9879776
Molecular Weight (calculated)
76881.3 Da
IEP (calculated)
6.217
GRAVY (calculated)
-0.532
Length
674 amino acids
Sequence
(BLAST)
001: MGSPSPPAPR QYGITKPIST AGPTEADLKR TTELEKFLVD AGLYESEEEA LKRENVLGEL GKIVKSWVKQ LTRQRGYSDQ MVEDASAVIF TFGSYRLGVH
101: GPGADIDTLC VGPSYVSREE DFFITLHDIL AEIDEVSELQ PVPDAHVPVM KFKFDGISID LLYASISQLV VPEDLDISHV SVLYNVDEAT VRSLNGCRVA
201: DQIIRLVPNI ENFRTTLRCL KLWAKKRGVY SNVIGFLGGV NWAILVACVC QLYPNAVPST LVSRFFRVYT QWRWPNPVRL CDIEEAELGF PVWDSRKNPR
301: DRTHHMPIIT PAYPCMNSSY NVSTSTLRVM TEQFQIGNNI CEDIELNKTG WGALFEPYPF FETYKNYLQV DIVAADAEDL RSWKGWVESR LRQLTLKIER
401: DTCGILQCHP YPNEYVDPFK QFSHCVFFMG LQRTQGMKIQ EGQRFDIRGT VEEFKGDVES YLFWKPGMEI HVTHVRRKQI PSYVFPEGYK RPRPSRPVCQ
501: QLTDKTSGED IREHCGGSLE RNCKRKIDVD CLDDKPNKPE KHTLISPNQE NISISDQQDQ AGINNDQKDG KEKERHCKRK IDCLGSKPNK PEKHALVNAS
601: QQKISTPDQQ DQAGIDEKQK ESEKDNQVFK RVDDDSISPS RQPQLFSSVT SSISGMICHL IWHKDQIETK FDPC
Best Arabidopsis Sequence Match ( AT4G32850.10 )
(BLAST)
001: MMVGTQNLGG SLPPLNSPKS YGITKPLSLA GPSSADIKRN VELEKYLVDE GLYESKDDTM RREEVLGRID QIVKHWVKQL TQQRGYTDQM VEDANAVIFT
101: FGSYRLGVHG PGADIDTLCV GPSYVNREED FFIILHDILA EMEEVTELHP VPDAHVPVMK FKFQGIPIDL LYASISLLVV PQDLDISSSS VLCEVDEPTV
201: RSLNGCRVAD QILKLVPNFE HFRTTLRCLK YWAKKRGVYS NVTGFLGGVN WALLVARVCQ LYPNAIPSML VSRFFRVYTQ WRWPNPVMLC AIEEDELGFP
301: VWDRRKNHRD RYHLMPIITP AYPCMNSSYN VSQSTLRVMT EQFQFGNNIL QEIELNKQHW SSLFEQYMFF EAYKNYLQVD IVAADAEDLL AWKGWVESRF
401: RQLTLKIERD TNGMLMCHPQ PNEYVDTARQ FLHCAFFMGL QRAEGVGGQE CQQFDIRGTV DEFRQEVNMY MFWKPGMDVF VSHVRRRQLP PFVFPNGYRR
501: PRQSRHQNLP GGKSGEDGSV SHSGSVVERH AKRKNDSEMM DVRPEKPEKR ASLSPQSLDI VSPENSAITT GWTPPVCNLR RPPSEEIEAD NLNTECTELT
601: DLARNECNSG SEQVLEVDSM AVVQECSDPA EPLGKCVTPD SVDVVACVSG QEENLDRNLR SVSISGTDSP LLPSRSCGQN RDYEGFGFPA ANSDPMGKKN
701: LYSQSGMSED LQSNSLVSGM EKSEDRARSE SFQKSQIRHV CYAKS
Arabidopsis Description
nPAPnuclear poly(a) polymerase [Source:TAIR;Acc:AT4G32850]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.