Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43792 | Soybean | plastid | 94.17 | 83.7 |
| CDY43388 | Canola | extracellular | 52.08 | 64.77 |
| Bra039355.1-P | Field mustard | plastid | 58.75 | 60.26 |
| CDY24236 | Canola | plastid | 59.17 | 59.92 |
| AT3G12930.1 | Thale cress | plastid | 59.17 | 59.66 |
| VIT_19s0027g00700.t01 | Wine grape | plastid | 54.17 | 59.36 |
| Bra034716.1-P | Field mustard | plastid | 57.92 | 58.65 |
| CDY60119 | Canola | plastid | 56.67 | 57.38 |
| CDY23554 | Canola | plastid | 56.67 | 57.38 |
| GSMUA_Achr4P09860_001 | Banana | plastid | 51.25 | 55.91 |
| PGSC0003DMT400056899 | Potato | plastid | 52.92 | 54.51 |
| Solyc07g066460.2.1 | Tomato | plastid | 52.5 | 54.08 |
| Os09t0493600-01 | Rice | plastid | 45.0 | 48.0 |
| EER99115 | Sorghum | plastid | 45.0 | 47.79 |
| TraesCS5A01G271400.1 | Wheat | mitochondrion, plastid | 44.58 | 47.14 |
| TraesCS5B01G271700.1 | Wheat | mitochondrion, plastid | 44.17 | 47.11 |
| TraesCS5D01G279000.1 | Wheat | mitochondrion, plastid | 44.17 | 47.11 |
| Zm00001d020971_P002 | Maize | plastid | 45.42 | 46.19 |
Protein Annotations
| Gene3D:3.30.460.10 | MapMan:35.1 | EMBL:ACUP02009772 | EnsemblPlantsGene:GLYMA_15G255800 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0017148 |
| GO:GO:0019538 | GO:GO:0043023 | GO:GO:0090071 | UniProt:I1MJ71 | InterPro:Iojap/RsfS/C7orf30 | EnsemblPlants:KRH13673 |
| ProteinID:KRH13673 | ProteinID:KRH13673.1 | HAMAP:MF_01477 | PFAM:PF02410 | PANTHER:PTHR21043 | PANTHER:PTHR21043:SF1 |
| SUPFAM:SSF81301 | TIGRFAMs:TIGR00090 | UniParc:UPI00023D72C0 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:48508359..48513281
Molecular Weight (calculated)
26570.6 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.291
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSSTVLSL AGTGAGVPVS FSGKLGHLET KFSPRPRKVF SRSCIKGLPL QQNTVNGLKS KKRNTHSSFA LGKNAEDSFL SDVNGDTDEM YDELINNYGK
101: VVFSRKDKKP ASAEIDDDAE SLSFAVELAT VASEVKAGDI KVLFVKPLVY WTRFFIIATA FSRPQIDAIG SRIRDRAEKK YGKIPTGDTK PNSWTLLDFG
201: DVVVHIFLPS QRAFYNLEEF YGNATPVELP FENQPPPFRI
101: VVFSRKDKKP ASAEIDDDAE SLSFAVELAT VASEVKAGDI KVLFVKPLVY WTRFFIIATA FSRPQIDAIG SRIRDRAEKK YGKIPTGDTK PNSWTLLDFG
201: DVVVHIFLPS QRAFYNLEEF YGNATPVELP FENQPPPFRI
001: MASSTGLTVA GALLAGDFRL PAVSSLIPRK TSSSLSCLSN RDLSSPYNCC WRLSRGKILT SLSNSRKFAV GKEAEDGFLS NVSEDTDEMF DDLFNKYGKV
101: VFRSTDVKSP TAEVDDDAES LAFAVELAKV ASDVKAGDIK VLFVKPLVYW TRFFIIATAF SRPQIDAIGS RMRDLAEKKY GKVANGDVKP NSWTLLDFGD
201: VVIHLFLPPQ RTFYNLEDFY GNAMQIELPF EDQSQPRN
101: VFRSTDVKSP TAEVDDDAES LAFAVELAKV ASDVKAGDIK VLFVKPLVYW TRFFIIATAF SRPQIDAIGS RMRDLAEKKY GKVANGDVKP NSWTLLDFGD
201: VVIHLFLPPQ RTFYNLEDFY GNAMQIELPF EDQSQPRN
Arabidopsis Description
IJProtein Iojap, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDY9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.