Factsheet for Os09t0493600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0338400-01
Os03t0339700-01
Os03t0673000-00
Os03t0673500-00
Os03t0727000-02
Os03t0727200-00
Os03t0771500-01
Os03t0772100-00
Os03t0797600-01
Os05t0337200-01
Os05t0476100-01
Os06t0688100-02
Os07t0129700-01
Os07t0182200-01
Os07t0676600-01
Os07t0677900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12930.1	Os06t0688100-02	AT2G34750.1	21798944
AT3G12930.1	Os03t0338400-01	AT3G56220.1	21798944
AT3G12930.1	Os05t0337200-01	AT3G56220.1	21798944
AT3G12930.1	Os07t0676600-01	AT3G56220.1	21798944
AT3G12930.1	Os03t0339700-01	AT3G56270.1	21798944
AT3G12930.1	Os05t0476100-01	AT3G56270.1	21798944
AT3G12930.1	Os07t0677900-01	AT3G56270.1	21798944
AT3G12930.1	Os03t0797600-01	AT4G02590.1	21798944
AT3G12930.1	Os07t0182200-01	AT4G02590.1	21798944
AT3G12930.1	Os03t0673000-00	AT4G08150.1	21798944
AT3G12930.1	Os03t0673500-00	AT4G08150.1	21798944
AT3G12930.1	Os03t0727000-02	AT4G08150.1	21798944
AT3G12930.1	Os03t0727200-00	AT4G08150.1	21798944
AT3G12930.1	Os03t0771500-01	AT4G08150.1	21798944
AT3G12930.1	Os03t0772100-00	AT4G08150.1	21798944
AT3G12930.1	Os07t0129700-01	AT4G08150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99115	Sorghum	plastid	72.89	72.57
TraesCS5D01G279000.1	Wheat	mitochondrion, plastid	72.0	72.0
TraesCS5B01G271700.1	Wheat	mitochondrion, plastid	71.56	71.56
TraesCS5A01G271400.1	Wheat	mitochondrion, plastid	72.0	71.37
Zm00001d020971_P002	Maize	plastid	71.11	67.8
GSMUA_Achr4P09860_001	Banana	plastid	54.67	55.91
CDY43388	Canola	extracellular	44.89	52.33
VIT_19s0027g00700.t01	Wine grape	plastid	48.44	49.77
AT3G12930.1	Thale cress	plastid	49.78	47.06
PGSC0003DMT400056899	Potato	plastid	47.56	45.92
Bra039355.1-P	Field mustard	plastid	47.56	45.73
CDY24236	Canola	plastid	48.0	45.57
Solyc07g066460.2.1	Tomato	plastid	47.11	45.49
KRH13673	Soybean	plastid	48.0	45.0
CDY60119	Canola	plastid	45.78	43.46
Bra034716.1-P	Field mustard	plastid	45.78	43.46
CDY23554	Canola	plastid	45.33	43.04
KRH43792	Soybean	plastid	47.56	39.63

Protein Annotations

Gene3D:3.30.460.10	MapMan:35.1	EntrezGene:4347448	EMBL:AK065737	ProteinID:BAF25460.1	ProteinID:BAT08766.1
ProteinID:EEE69974.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0017148	GO:GO:0019538	GO:GO:0043023	GO:GO:0090071
InterPro:Iojap/RsfS/C7orf30	HAMAP:MF_01477	EnsemblPlantsGene:Os09g0493600	EnsemblPlants:Os09t0493600-01	PFAM:PF02410	PANTHER:PTHR21043
PANTHER:PTHR21043:SF1	UniProt:Q0J0L9	SUPFAM:SSF81301	TIGRFAMs:TIGR00090	UniParc:UPI0000DD97B5	RefSeq:XP_015611748.1
SEG:seg	:	:	:	:	:

Description

Similar to IojAP protein-like (Expressed protein). (Os09t0493600-01)

Coordinates

chr9:-:19119353..19121206

Molecular Weight (calculated)

24158.6 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.079

Length

225 amino acids

Sequence
(BLAST)

001: MRAAAIQTHA LVCAPPGAAA AALAPWPRRA AGGGGGGPLL HHHRLRSDLP HTRSLPCRAR SPSSSSSSNV NSGRGDDADN LLEDLLSKHG EVVYNAGGAP
101: GIDADDDAEC LSFAVSLAKV ASEVKAADIR VLFVKPLVYW TRFFIILTAF SNAQIDAISS KMRDIGEKQF SIVASGDTKP NSWTLLDFGD VVVHIFLPQQ
201: RAFYNLEEFY GNATSIELPF EKQLQ

Best Arabidopsis Sequence Match ( AT3G12930.1 )
(BLAST)

001: MASSTGLTVA GALLAGDFRL PAVSSLIPRK TSSSLSCLSN RDLSSPYNCC WRLSRGKILT SLSNSRKFAV GKEAEDGFLS NVSEDTDEMF DDLFNKYGKV
101: VFRSTDVKSP TAEVDDDAES LAFAVELAKV ASDVKAGDIK VLFVKPLVYW TRFFIIATAF SRPQIDAIGS RMRDLAEKKY GKVANGDVKP NSWTLLDFGD
201: VVIHLFLPPQ RTFYNLEDFY GNAMQIELPF EDQSQPRN

Arabidopsis Description

IJProtein Iojap, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDY9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.