Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d050315_P001 | Maize | nucleus | 93.79 | 95.24 |
Zm00001d032317_P001 | Maize | nucleus | 53.93 | 94.07 |
Os08t0416100-01 | Rice | nucleus | 79.72 | 79.91 |
TraesCS4D01G337100.1 | Wheat | nucleus | 75.73 | 75.91 |
TraesCS5A01G510500.1 | Wheat | nucleus | 75.5 | 75.59 |
TraesCS4B01G341100.1 | Wheat | plastid | 75.62 | 75.53 |
Solyc10g009070.2.1 | Tomato | nucleus | 60.14 | 65.35 |
GSMUA_Achr9P14580_001 | Banana | nucleus | 62.6 | 65.04 |
KRH64859 | Soybean | nucleus | 58.15 | 63.84 |
KRH09570 | Soybean | nucleus | 57.8 | 63.45 |
HORVU4Hr1G083970.6 | Barley | nucleus | 62.37 | 60.94 |
Bra003691.1-P | Field mustard | cytosol | 56.74 | 56.81 |
CDX79187 | Canola | cytosol | 56.39 | 56.72 |
CDX68066 | Canola | cytosol | 56.62 | 56.69 |
AT1G77030.1 | Thale cress | nucleus | 56.15 | 56.69 |
OQU93356 | Sorghum | cytosol | 16.53 | 31.06 |
KXG22990 | Sorghum | cytosol | 16.18 | 31.01 |
EER99761 | Sorghum | cytosol | 15.47 | 26.29 |
EES18259 | Sorghum | nucleus | 17.0 | 24.17 |
KXG37786 | Sorghum | nucleus | 12.43 | 23.4 |
EER90714 | Sorghum | nucleus | 17.0 | 23.27 |
OQU76528 | Sorghum | nucleus | 16.06 | 22.87 |
EES01082 | Sorghum | mitochondrion, plastid | 15.24 | 22.11 |
EES00264 | Sorghum | nucleus, plastid | 16.65 | 22.05 |
EES03287 | Sorghum | cytosol | 14.19 | 21.57 |
EER99450 | Sorghum | nucleus | 18.52 | 21.21 |
KXG35997 | Sorghum | nucleus | 19.34 | 20.78 |
OQU76491 | Sorghum | nucleus | 15.12 | 19.66 |
OQU81941 | Sorghum | nucleus | 18.76 | 19.0 |
EES07789 | Sorghum | mitochondrion | 14.42 | 14.95 |
Protein Annotations
Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1Z5R9N5 | InterPro:DBP10_C | InterPro:DDX54/DBP10 | InterPro:DEAD/DEAH_box_helicase_dom |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 |
GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0016787 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014014 |
EnsemblPlants:OQU80427 | ProteinID:OQU80427 | ProteinID:OQU80427.1 | InterPro:P-loop_NTPase | PFAM:PD024971 | PFAM:PF00270 |
PFAM:PF00271 | PFAM:PF08147 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 | PANTHER:PTHR24031 |
PANTHER:PTHR24031:SF292 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 | SMART:SM01123 | EnsemblPlantsGene:SORBI_3007G126500 |
SUPFAM:SSF52540 | UniParc:UPI000B42393F | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:53953843..53960674
Molecular Weight (calculated)
94938.5 Da
IEP (calculated)
10.500
GRAVY (calculated)
-0.576
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MARLTPAKSK PTRKPKSSSS SAMDAAAEPD TMSPRRPKRE KSAGGGSKKS KSGGSKKAKS GGFESMGLCE EVYRGVRHKG YRVPTPIQRK TMPLILAGVD
101: VAAMARTGSG KTAAFLVPML QRLRRRDPSA GVRALILSPT RDLAMQTLKF CIQLGKFTDL RTSIIVGGDS MESQFEDLSE CPDIIIATPG RLMHHLNDVK
201: DMTLRSVEYV VFDEADSLFS MGFAKHLHDI LKKLSDTRQT LLFSATLPSA LADFAKAGLR DPHIVRLDLD KKISPDLRLV FFTLRQEEKL AALLYLVRER
301: ISSEEQTIIF VSTKHHVEFL NILFREEGLE PSLSYGAMDQ EARMIHISKF RARKTMLLIV TDVAARGLDI PLLDNVVNWD FPAKPKLFVH RVGRVARQGR
401: IGTAYTFVTS EDMPYLLDLH LFLSRPLRPA PTEEEILKDM DTINMKIDEA IANGESVYGR FPQTVLDLAS DGLKEVISGC TELIALEKPC ANAFRLYLKT
501: RAMPSKESIK RVKDLPREGL HPIFRDVLRS DELSALAFSE RLKSFRPKQT ILEAEGEAAK ARNSKGSNQW LDVMKKKREV HEGIINLVHQ KSSEDPRPEV
601: EEVDDISNWE KKEVCGKKRK LQSFRDEDYY ISTVPQNQHL EAGLSVRDNE GFVENRFDAA VLDLVDDEAS GMQAQKTRYH WMKNKFVKLN AGDRVTATGK
701: IKTEGGAKIK ASATGIYKRW QQRTHKSINI GGKSGNFAEE GTSSSGGYQR GNKKHFVSHG RRSIPNANVP SEIRNPEQMQ KSRQQKAMEI TRLKNKSAKD
801: GKFQNKFQKN RRPDGNGNGK GRGSGKGAGK GFSKGAGGKG GKGKGKVKGK GGR
101: VAAMARTGSG KTAAFLVPML QRLRRRDPSA GVRALILSPT RDLAMQTLKF CIQLGKFTDL RTSIIVGGDS MESQFEDLSE CPDIIIATPG RLMHHLNDVK
201: DMTLRSVEYV VFDEADSLFS MGFAKHLHDI LKKLSDTRQT LLFSATLPSA LADFAKAGLR DPHIVRLDLD KKISPDLRLV FFTLRQEEKL AALLYLVRER
301: ISSEEQTIIF VSTKHHVEFL NILFREEGLE PSLSYGAMDQ EARMIHISKF RARKTMLLIV TDVAARGLDI PLLDNVVNWD FPAKPKLFVH RVGRVARQGR
401: IGTAYTFVTS EDMPYLLDLH LFLSRPLRPA PTEEEILKDM DTINMKIDEA IANGESVYGR FPQTVLDLAS DGLKEVISGC TELIALEKPC ANAFRLYLKT
501: RAMPSKESIK RVKDLPREGL HPIFRDVLRS DELSALAFSE RLKSFRPKQT ILEAEGEAAK ARNSKGSNQW LDVMKKKREV HEGIINLVHQ KSSEDPRPEV
601: EEVDDISNWE KKEVCGKKRK LQSFRDEDYY ISTVPQNQHL EAGLSVRDNE GFVENRFDAA VLDLVDDEAS GMQAQKTRYH WMKNKFVKLN AGDRVTATGK
701: IKTEGGAKIK ASATGIYKRW QQRTHKSINI GGKSGNFAEE GTSSSGGYQR GNKKHFVSHG RRSIPNANVP SEIRNPEQMQ KSRQQKAMEI TRLKNKSAKD
801: GKFQNKFQKN RRPDGNGNGK GRGSGKGAGK GFSKGAGGKG GKGKGKVKGK GGR
001: MVEGKGFLVS SVTELHRKEK QKKKGKSGGF ESLNLGPNVF NAIKKKGYKV PTPIQRKTMP LILSGVDVVA MARTGSGKTA AFLIPMLEKL KQHVPQGGVR
101: ALILSPTRDL AEQTLKFTKE LGKFTDLRVS LLVGGDSMED QFEELTKGPD VIIATPGRLM HLLSEVDDMT LRTVEYVVFD EADSLFGMGF AEQLHQILTQ
201: LSENRQTLLF SATLPSALAE FAKAGLREPQ LVRLDVENKI SPDLKLSFLT VRPEEKYSAL LYLVREHISS DQQTLIFVST KHHVEFVNSL FKLENIEPSV
301: CYGDMDQDAR KIHVSRFRAR KTMLLIVTDI AARGIDIPLL DNVINWDFPP RPKIFVHRVG RAARAGRTGC AYSFVTPEDM PYMLDLHLFL SKPVRPAPTE
401: DEVLKNMEEV MTKTSQAIDS GVTVYGRFPQ KTIDLIFNRT REMIDSSAEL DSLERTSTKA FRLYSKTKPS PSKESIRRAK DLPREGLHPI FRSIIETGEL
501: EAMSFFQKIK NFRPKQTILE AEGEVAKSKH VKGPAGQWVD VMKKKRAIHE EIINTRHQQN QKTSNNHLEM EAEPTTSFVD GTVEGSKVSG KKRKAQETFK
601: DDEFFISSIP VNHHSEAGLS LRGNEGFGSN RLDAAVLDLV ADDGQGIKQQ QSNYHWDKKG KKYIKLNNGD RVTASGKIKT ESGAKATAKK TGIYKRWQER
701: SHKKVSRDSG DADETTRMSG RGGRDGKRRQ GSVPNAHVRS EIKDLDQVRK ERQQKANKVS YLQSKRGGRG GRGGARGGRG GGARGGRGGS RDFGGGGRDF
801: GSSSDRGGRS GGRDFGGRRG GASTSSRGGK RGGGRGGGGK RGRGR
101: ALILSPTRDL AEQTLKFTKE LGKFTDLRVS LLVGGDSMED QFEELTKGPD VIIATPGRLM HLLSEVDDMT LRTVEYVVFD EADSLFGMGF AEQLHQILTQ
201: LSENRQTLLF SATLPSALAE FAKAGLREPQ LVRLDVENKI SPDLKLSFLT VRPEEKYSAL LYLVREHISS DQQTLIFVST KHHVEFVNSL FKLENIEPSV
301: CYGDMDQDAR KIHVSRFRAR KTMLLIVTDI AARGIDIPLL DNVINWDFPP RPKIFVHRVG RAARAGRTGC AYSFVTPEDM PYMLDLHLFL SKPVRPAPTE
401: DEVLKNMEEV MTKTSQAIDS GVTVYGRFPQ KTIDLIFNRT REMIDSSAEL DSLERTSTKA FRLYSKTKPS PSKESIRRAK DLPREGLHPI FRSIIETGEL
501: EAMSFFQKIK NFRPKQTILE AEGEVAKSKH VKGPAGQWVD VMKKKRAIHE EIINTRHQQN QKTSNNHLEM EAEPTTSFVD GTVEGSKVSG KKRKAQETFK
601: DDEFFISSIP VNHHSEAGLS LRGNEGFGSN RLDAAVLDLV ADDGQGIKQQ QSNYHWDKKG KKYIKLNNGD RVTASGKIKT ESGAKATAKK TGIYKRWQER
701: SHKKVSRDSG DADETTRMSG RGGRDGKRRQ GSVPNAHVRS EIKDLDQVRK ERQQKANKVS YLQSKRGGRG GRGGARGGRG GGARGGRGGS RDFGGGGRDF
801: GSSSDRGGRS GGRDFGGRRG GASTSSRGGK RGGGRGGGGK RGRGR
Arabidopsis Description
RH29Putative DEAD-box ATP-dependent RNA helicase 29 [Source:UniProtKB/Swiss-Prot;Acc:O49289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.