Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47978 | Canola | plastid | 63.51 | 96.17 |
| Bra016869.1-P | Field mustard | cytosol, plastid | 89.57 | 93.1 |
| CDY14843 | Canola | cytosol, plastid | 89.89 | 92.97 |
| AT3G58510.2 | Thale cress | cytosol | 82.31 | 85.13 |
| AT3G58570.1 | Thale cress | cytosol | 80.57 | 78.95 |
| VIT_08s0007g07070.t01 | Wine grape | cytosol, plastid | 75.99 | 77.33 |
| Solyc03g052980.2.1 | Tomato | nucleus | 72.99 | 75.49 |
| PGSC0003DMT400002828 | Potato | cytosol | 73.3 | 75.08 |
| KRH38030 | Soybean | endoplasmic reticulum | 71.56 | 74.14 |
| KRH71800 | Soybean | plastid | 70.93 | 73.49 |
| HORVU4Hr1G031280.1 | Barley | cytosol, plastid | 67.61 | 71.21 |
| TraesCS4D01G148700.1 | Wheat | golgi | 67.46 | 71.05 |
| TraesCS4B01G126000.1 | Wheat | cytosol, plastid | 67.46 | 71.05 |
| Os11t0599500-00 | Rice | nucleus, plasma membrane | 68.56 | 69.66 |
| Zm00001d048924_P001 | Maize | plasma membrane | 66.67 | 69.41 |
| KXG28851 | Sorghum | cytosol, plastid | 67.14 | 68.0 |
| TraesCS4A01G141400.1 | Wheat | plastid | 67.3 | 64.94 |
| AT1G28180.1 | Thale cress | cytosol | 23.85 | 41.03 |
| AT5G63120.2 | Thale cress | cytosol | 33.33 | 35.7 |
| AT1G31970.1 | Thale cress | cytosol | 28.12 | 33.15 |
| AT1G55150.2 | Thale cress | cytosol | 27.49 | 33.08 |
| AT3G01540.2 | Thale cress | cytosol | 31.75 | 32.47 |
| AT4G33370.1 | Thale cress | cytosol | 25.91 | 30.26 |
| AT5G14610.1 | Thale cress | cytosol | 33.49 | 29.78 |
| AT5G51280.1 | Thale cress | cytosol | 27.49 | 29.44 |
| AT2G47330.1 | Thale cress | cytosol | 33.33 | 27.76 |
| AT2G33730.1 | Thale cress | nucleus | 30.33 | 26.19 |
| AT3G06480.1 | Thale cress | cytosol | 33.97 | 19.76 |
| AT3G09620.2 | Thale cress | nucleus | 28.91 | 18.48 |
| AT1G20920.3 | Thale cress | nucleus | 31.28 | 16.98 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:818852 | ProteinID:AAD23001.1 | ProteinID:AEC10133.1 | ProteinID:ANM62393.1 |
| ProteinID:ANM62394.1 | ArrayExpress:AT2G42520 | EnsemblPlantsGene:AT2G42520 | RefSeq:AT2G42520 | TAIR:AT2G42520 | RefSeq:AT2G42520-TAIR-G |
| EnsemblPlants:AT2G42520.2 | Unigene:At.43442 | EMBL:BT004111 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010501 | GO:GO:0016787 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR014014 | RefSeq:NP_001324553.1 | RefSeq:NP_001324554.1 | RefSeq:NP_181780.1 | InterPro:P-loop_NTPase | PFAM:PF00270 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF363 |
| UniProt:Q84W89 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 | UniParc:UPI00000AB1E6 |
| SEG:seg | : | : | : | : | : |
Description
RH37DEAD-box ATP-dependent RNA helicase 37 [Source:UniProtKB/Swiss-Prot;Acc:Q84W89]
Coordinates
chr2:+:17704741..17709060
Molecular Weight (calculated)
67630.3 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.484
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASWADVAD SENTGSGSSN QNSHPSRPAY VPPHLRNRPA ASEPVAPLPA NDRVGYGGPP SGSRWAPGGS GVGVGGGGGY RADAGRPGSG SGYGGRGGGG
101: WNNRSGGWDR REREVNPFEN DDSEPEPAFT EQDNTVINFD AYEDIPIETS GDNVPPPVNT FAEIDLGEAL NLNIRRCKYV KPTPVQRHAI PILLEGRDLM
201: ACAQTGSGKT AAFCFPIISG IMKDQHVQRP RGSRTVYPLA VILSPTRELA SQIHDEAKKF SYQTGVKVVV AYGGTPINQQ LRELERGVDI LVATPGRLND
301: LLERARVSMQ MIRFLALDEA DRMLDMGFEP QIRKIVEQMD MPPRGVRQTL LFSATFPREI QRLAADFLAN YIFLAVGRVG SSTDLIVQRV EFVLDSDKRS
401: HLMDLLHAQR ENGIQGKQAL TLVFVETKRG ADSLENWLCI NGFPATSIHG DRTQQEREVA LKAFKSGRTP ILVATDVAAR GLDIPHVAHV VNFDLPNDID
501: DYVHRIGRTG RAGKSGLATA FFNDGNTSLA RPLAELMQEA NQEVPEWLTR YASRSSFGGG KNRRSGGRFG GRDFRREGSF GSGRGGYGGG GGGYGGGGGY
601: GGGGGYGGGG GYGGGYGGAS SGGYGGEPPS AWD
101: WNNRSGGWDR REREVNPFEN DDSEPEPAFT EQDNTVINFD AYEDIPIETS GDNVPPPVNT FAEIDLGEAL NLNIRRCKYV KPTPVQRHAI PILLEGRDLM
201: ACAQTGSGKT AAFCFPIISG IMKDQHVQRP RGSRTVYPLA VILSPTRELA SQIHDEAKKF SYQTGVKVVV AYGGTPINQQ LRELERGVDI LVATPGRLND
301: LLERARVSMQ MIRFLALDEA DRMLDMGFEP QIRKIVEQMD MPPRGVRQTL LFSATFPREI QRLAADFLAN YIFLAVGRVG SSTDLIVQRV EFVLDSDKRS
401: HLMDLLHAQR ENGIQGKQAL TLVFVETKRG ADSLENWLCI NGFPATSIHG DRTQQEREVA LKAFKSGRTP ILVATDVAAR GLDIPHVAHV VNFDLPNDID
501: DYVHRIGRTG RAGKSGLATA FFNDGNTSLA RPLAELMQEA NQEVPEWLTR YASRSSFGGG KNRRSGGRFG GRDFRREGSF GSGRGGYGGG GGGYGGGGGY
601: GGGGGYGGGG GYGGGYGGAS SGGYGGEPPS AWD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.