Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY42438 | Canola | nucleus | 86.95 | 92.77 |
CDY49132 | Canola | nucleus | 84.16 | 91.95 |
AT1G74160.1 | Thale cress | nucleus | 79.58 | 77.95 |
Bra031037.1-P | Field mustard | nucleus | 46.31 | 55.69 |
KRH63201 | Soybean | nucleus | 48.21 | 43.96 |
KRH54713 | Soybean | nucleus | 48.31 | 43.93 |
VIT_17s0000g05210.t01 | Wine grape | cytosol | 47.91 | 43.77 |
KRH03155 | Soybean | nucleus | 43.53 | 41.62 |
KRH56796 | Soybean | nucleus | 43.23 | 41.29 |
Solyc03g115000.2.1 | Tomato | nucleus | 44.72 | 41.12 |
PGSC0003DMT400063076 | Potato | nucleus | 44.72 | 41.12 |
GSMUA_Achr4P32860_001 | Banana | nucleus | 33.47 | 34.39 |
Bra023526.1-P | Field mustard | nucleus | 28.69 | 33.84 |
Bra039160.1-P | Field mustard | nucleus | 27.09 | 33.17 |
Bra001034.1-P | Field mustard | nucleus | 27.79 | 32.56 |
Bra008689.1-P | Field mustard | nucleus | 28.78 | 32.25 |
TraesCS2D01G183400.1 | Wheat | nucleus | 28.59 | 30.08 |
Os07t0603300-01 | Rice | nucleus | 28.09 | 30.0 |
TraesCS2B01G202300.1 | Wheat | nucleus | 28.29 | 29.89 |
HORVU2Hr1G032710.2 | Barley | cytosol | 28.39 | 29.84 |
TraesCS2A01G176000.1 | Wheat | nucleus | 28.39 | 29.75 |
TraesCS2B01G281200.2 | Wheat | cytosol | 31.57 | 29.74 |
HORVU2Hr1G063820.1 | Barley | cytosol | 31.77 | 29.7 |
TraesCS2D01G262900.1 | Wheat | cytosol | 31.77 | 29.65 |
Os03t0418700-02 | Rice | nucleus | 27.29 | 29.59 |
TraesCS2A01G261000.1 | Wheat | cytosol | 31.57 | 29.54 |
EER98557 | Sorghum | nucleus | 31.87 | 29.52 |
Zm00001d019700_P006 | Maize | nucleus | 30.98 | 29.2 |
KXG36646 | Sorghum | nucleus | 27.89 | 29.2 |
GSMUA_Achr7P26670_001 | Banana | nucleus | 20.02 | 29.0 |
Os07t0109400-01 | Rice | nucleus | 31.37 | 28.93 |
Zm00001d005297_P006 | Maize | nucleus | 31.37 | 28.64 |
Zm00001d006828_P001 | Maize | nucleus | 26.99 | 28.38 |
GSMUA_Achr4P14410_001 | Banana | nucleus | 24.5 | 28.34 |
GSMUA_Achr4P07300_001 | Banana | cytosol | 25.5 | 28.26 |
Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 26.59 | 28.08 |
KXG39125 | Sorghum | plastid | 22.71 | 24.97 |
Protein Annotations
MapMan:13.4.1.2.2 | EnsemblPlantsGene:Bra008136 | EnsemblPlants:Bra008136.1 | EnsemblPlants:Bra008136.1-P | ncoils:Coil | InterPro:DUF3741-assoc |
InterPro:DUF4378 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009987 |
GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:LNG1/2 | UniProt:M4CV89 |
PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF3 | UniParc:UPI0002545793 | SEG:seg |
Description
AT1G74160 (E=0.0) | unknown protein
Coordinates
chrA02:+:13359220..13362960
Molecular Weight (calculated)
111423.0 Da
IEP (calculated)
9.773
GRAVY (calculated)
-0.766
Length
1004 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGSGNA NSINIERDSV DTFYQAKDTD TNIGVNVKEK QRVSTESSRV SFSSSCSSSP
0101: SSPELIRGVQ PEASAYDQAN FPESPTSDSE MAEGNGFSQL GFDLRDVVRD SMYRDARGLS LKTPMTREEV VRRSRREDSP RPYGLKQSTP ADLSESFRFL
0201: AKLRESPHHY NEVGAKGAPA RYSVDSHDTL KSRQKLKELP RLSLDSRERV VQNSVVDLKP VKLPESSSSS NKKRPPSVVA KLMGLETLPG SPVGRDIHKL
0301: GLNNTFDDNN DPFSRSLREK NLNRTIRFSP SSPRSLGKDP SSPRWRNSDF VMKPLSSSRF PIEPAPWKQA DRNRVLQKQP VKAAAPPEVA KFPPTVYSEM
0401: ERRLNDLEFK DSGKDLRALK QILEAMQSKV LLDTEKQPQS SNMAAQRDYA TSNQETTSRT RVPSSSSNQV YQSPIVIMKP AKLVEKAGIP ASSLIPIHSL
0501: SGGLNKIRRE KPDDKGASTS SKRVTKDSSS GKGRAESSLS SVDKKPNSRN VPSSSKKPHK VTKESGTSKS SGSVSPRLQQ KKLEHDKRSR PPTPPSDSTK
0601: SRKPLNRQMA ESTSPGGRRR PKAQKSLQQS DDLVSQGSNE SRTSSHDMCT HSEAEAATVI EQASVMEAAK AVVSNLMHNK SSPRFSEDGS SANLSLVALE
0701: HPSPISVLDT SIYREMEPSP VKTQGYVVAH DSGDDEQCED QWNPAYSFSE TTSTFSPEIN RKKLQNVEHL VQKLRRLNST HDEANQDYIA SLCETSDPNT
0801: DHRYISEILL ASGLLLRDLG SGLTTFQLHP SGHPINPELF YVLEQTKGSS NTHLLLHKEE SKALNKEKLN RKLVFDTVNE LLVEKLASVE ATTNPLMKSS
0901: AKKAMSAQQL LKELCTEIES LQRQATKRSE NFLLEEEDDF LKSILAEDVM IRSGNWVDFS GEFSGLVLDV ERLIFKDLVS EIVHAETSRL QAKSGRRRTL
1001: FSGQ
0101: SSPELIRGVQ PEASAYDQAN FPESPTSDSE MAEGNGFSQL GFDLRDVVRD SMYRDARGLS LKTPMTREEV VRRSRREDSP RPYGLKQSTP ADLSESFRFL
0201: AKLRESPHHY NEVGAKGAPA RYSVDSHDTL KSRQKLKELP RLSLDSRERV VQNSVVDLKP VKLPESSSSS NKKRPPSVVA KLMGLETLPG SPVGRDIHKL
0301: GLNNTFDDNN DPFSRSLREK NLNRTIRFSP SSPRSLGKDP SSPRWRNSDF VMKPLSSSRF PIEPAPWKQA DRNRVLQKQP VKAAAPPEVA KFPPTVYSEM
0401: ERRLNDLEFK DSGKDLRALK QILEAMQSKV LLDTEKQPQS SNMAAQRDYA TSNQETTSRT RVPSSSSNQV YQSPIVIMKP AKLVEKAGIP ASSLIPIHSL
0501: SGGLNKIRRE KPDDKGASTS SKRVTKDSSS GKGRAESSLS SVDKKPNSRN VPSSSKKPHK VTKESGTSKS SGSVSPRLQQ KKLEHDKRSR PPTPPSDSTK
0601: SRKPLNRQMA ESTSPGGRRR PKAQKSLQQS DDLVSQGSNE SRTSSHDMCT HSEAEAATVI EQASVMEAAK AVVSNLMHNK SSPRFSEDGS SANLSLVALE
0701: HPSPISVLDT SIYREMEPSP VKTQGYVVAH DSGDDEQCED QWNPAYSFSE TTSTFSPEIN RKKLQNVEHL VQKLRRLNST HDEANQDYIA SLCETSDPNT
0801: DHRYISEILL ASGLLLRDLG SGLTTFQLHP SGHPINPELF YVLEQTKGSS NTHLLLHKEE SKALNKEKLN RKLVFDTVNE LLVEKLASVE ATTNPLMKSS
0901: AKKAMSAQQL LKELCTEIES LQRQATKRSE NFLLEEEDDF LKSILAEDVM IRSGNWVDFS GEFSGLVLDV ERLIFKDLVS EIVHAETSRL QAKSGRRRTL
1001: FSGQ
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.