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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42438 Canola nucleus 86.95 92.77
CDY49132 Canola nucleus 84.16 91.95
AT1G74160.1 Thale cress nucleus 79.58 77.95
Bra031037.1-P Field mustard nucleus 46.31 55.69
KRH63201 Soybean nucleus 48.21 43.96
KRH54713 Soybean nucleus 48.31 43.93
VIT_17s0000g05210.t01 Wine grape cytosol 47.91 43.77
KRH03155 Soybean nucleus 43.53 41.62
KRH56796 Soybean nucleus 43.23 41.29
Solyc03g115000.2.1 Tomato nucleus 44.72 41.12
PGSC0003DMT400063076 Potato nucleus 44.72 41.12
GSMUA_Achr4P32860_001 Banana nucleus 33.47 34.39
Bra023526.1-P Field mustard nucleus 28.69 33.84
Bra039160.1-P Field mustard nucleus 27.09 33.17
Bra001034.1-P Field mustard nucleus 27.79 32.56
Bra008689.1-P Field mustard nucleus 28.78 32.25
TraesCS2D01G183400.1 Wheat nucleus 28.59 30.08
Os07t0603300-01 Rice nucleus 28.09 30.0
TraesCS2B01G202300.1 Wheat nucleus 28.29 29.89
HORVU2Hr1G032710.2 Barley cytosol 28.39 29.84
TraesCS2A01G176000.1 Wheat nucleus 28.39 29.75
TraesCS2B01G281200.2 Wheat cytosol 31.57 29.74
HORVU2Hr1G063820.1 Barley cytosol 31.77 29.7
TraesCS2D01G262900.1 Wheat cytosol 31.77 29.65
Os03t0418700-02 Rice nucleus 27.29 29.59
TraesCS2A01G261000.1 Wheat cytosol 31.57 29.54
EER98557 Sorghum nucleus 31.87 29.52
Zm00001d019700_P006 Maize nucleus 30.98 29.2
KXG36646 Sorghum nucleus 27.89 29.2
GSMUA_Achr7P26670_001 Banana nucleus 20.02 29.0
Os07t0109400-01 Rice nucleus 31.37 28.93
Zm00001d005297_P006 Maize nucleus 31.37 28.64
Zm00001d006828_P001 Maize nucleus 26.99 28.38
GSMUA_Achr4P14410_001 Banana nucleus 24.5 28.34
GSMUA_Achr4P07300_001 Banana cytosol 25.5 28.26
Zm00001d022072_P001 Maize cytosol, mitochondrion, nucleus, plastid 26.59 28.08
KXG39125 Sorghum plastid 22.71 24.97
Protein Annotations
MapMan:13.4.1.2.2EnsemblPlantsGene:Bra008136EnsemblPlants:Bra008136.1EnsemblPlants:Bra008136.1-Pncoils:CoilInterPro:DUF3741-assoc
InterPro:DUF4378GO:GO:0005575GO:GO:0008150GO:GO:0009506GO:GO:0009653GO:GO:0009987
GO:GO:0016043GO:GO:0016049GO:GO:0040007GO:GO:0051513InterPro:LNG1/2UniProt:M4CV89
PFAM:PF14309PFAM:PF14383PANTHER:PTHR31680PANTHER:PTHR31680:SF3UniParc:UPI0002545793SEG:seg
Description
AT1G74160 (E=0.0) | unknown protein
Coordinates
chrA02:+:13359220..13362960
Molecular Weight (calculated)
111423.0 Da
IEP (calculated)
9.773
GRAVY (calculated)
-0.766
Length
1004 amino acids
Sequence
(BLAST)
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGSGNA NSINIERDSV DTFYQAKDTD TNIGVNVKEK QRVSTESSRV SFSSSCSSSP
0101: SSPELIRGVQ PEASAYDQAN FPESPTSDSE MAEGNGFSQL GFDLRDVVRD SMYRDARGLS LKTPMTREEV VRRSRREDSP RPYGLKQSTP ADLSESFRFL
0201: AKLRESPHHY NEVGAKGAPA RYSVDSHDTL KSRQKLKELP RLSLDSRERV VQNSVVDLKP VKLPESSSSS NKKRPPSVVA KLMGLETLPG SPVGRDIHKL
0301: GLNNTFDDNN DPFSRSLREK NLNRTIRFSP SSPRSLGKDP SSPRWRNSDF VMKPLSSSRF PIEPAPWKQA DRNRVLQKQP VKAAAPPEVA KFPPTVYSEM
0401: ERRLNDLEFK DSGKDLRALK QILEAMQSKV LLDTEKQPQS SNMAAQRDYA TSNQETTSRT RVPSSSSNQV YQSPIVIMKP AKLVEKAGIP ASSLIPIHSL
0501: SGGLNKIRRE KPDDKGASTS SKRVTKDSSS GKGRAESSLS SVDKKPNSRN VPSSSKKPHK VTKESGTSKS SGSVSPRLQQ KKLEHDKRSR PPTPPSDSTK
0601: SRKPLNRQMA ESTSPGGRRR PKAQKSLQQS DDLVSQGSNE SRTSSHDMCT HSEAEAATVI EQASVMEAAK AVVSNLMHNK SSPRFSEDGS SANLSLVALE
0701: HPSPISVLDT SIYREMEPSP VKTQGYVVAH DSGDDEQCED QWNPAYSFSE TTSTFSPEIN RKKLQNVEHL VQKLRRLNST HDEANQDYIA SLCETSDPNT
0801: DHRYISEILL ASGLLLRDLG SGLTTFQLHP SGHPINPELF YVLEQTKGSS NTHLLLHKEE SKALNKEKLN RKLVFDTVNE LLVEKLASVE ATTNPLMKSS
0901: AKKAMSAQQL LKELCTEIES LQRQATKRSE NFLLEEEDDF LKSILAEDVM IRSGNWVDFS GEFSGLVLDV ERLIFKDLVS EIVHAETSRL QAKSGRRRTL
1001: FSGQ
Best Arabidopsis Sequence Match ( AT1G74160.1 )
(BLAST)
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.