Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019700_P006 | Maize | nucleus | 85.33 | 86.85 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 62.36 | 63.41 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 62.92 | 63.38 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 62.55 | 63.19 |
| Os07t0109400-01 | Rice | nucleus | 62.92 | 62.63 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 61.35 | 61.92 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 34.23 | 37.97 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 34.69 | 34.21 |
| CDY42438 | Canola | nucleus | 28.78 | 33.16 |
| Solyc03g115000.2.1 | Tomato | nucleus | 33.03 | 32.78 |
| CDY49132 | Canola | nucleus | 27.58 | 32.54 |
| PGSC0003DMT400063076 | Potato | nucleus | 32.75 | 32.51 |
| KRH54713 | Soybean | nucleus | 32.75 | 32.16 |
| KRH63201 | Soybean | nucleus | 32.66 | 32.15 |
| CDX81888 | Canola | nucleus | 24.54 | 31.97 |
| KRH56796 | Soybean | nucleus | 30.9 | 31.87 |
| Bra008136.1-P | Field mustard | nucleus | 29.52 | 31.87 |
| AT1G74160.1 | Thale cress | nucleus | 29.52 | 31.22 |
| Bra031037.1-P | Field mustard | nucleus | 23.99 | 31.14 |
| CDY59655 | Canola | nucleus | 23.99 | 31.14 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.04 | 31.05 |
| KRH03155 | Soybean | nucleus | 29.98 | 30.95 |
| Bra039160.1-P | Field mustard | nucleus | 23.34 | 30.85 |
| CDX96710 | Canola | nucleus | 24.82 | 30.71 |
| CDX83829 | Canola | cytosol | 23.25 | 30.69 |
| CDY60473 | Canola | nucleus | 23.16 | 30.39 |
| CDY43253 | Canola | nucleus | 23.25 | 30.29 |
| CDX91979 | Canola | nucleus | 23.71 | 30.06 |
| CDX85545 | Canola | nucleus | 22.14 | 29.89 |
| AT3G02170.1 | Thale cress | nucleus | 23.99 | 28.73 |
| Bra001034.1-P | Field mustard | nucleus | 22.69 | 28.7 |
| Bra023526.1-P | Field mustard | nucleus | 22.51 | 28.67 |
| Bra008689.1-P | Field mustard | nucleus | 23.62 | 28.57 |
| KRH45061 | Soybean | nucleus | 25.55 | 28.47 |
| CDX74270 | Canola | nucleus | 22.42 | 28.35 |
| CDX69516 | Canola | nucleus | 23.43 | 28.35 |
| AT5G15580.1 | Thale cress | nucleus | 24.17 | 28.26 |
| KXG36646 | Sorghum | nucleus | 24.72 | 27.95 |
| KRH01314 | Soybean | nucleus | 25.0 | 27.82 |
| AT1G18620.2 | Thale cress | nucleus | 25.65 | 27.42 |
| CDY26440 | Canola | nucleus | 22.51 | 27.32 |
| CDX90985 | Canola | nucleus | 21.49 | 27.32 |
| KRH18379 | Soybean | nucleus | 24.82 | 27.31 |
| KRG93656 | Soybean | nucleus | 24.63 | 27.02 |
| PGSC0003DMT400003717 | Potato | nucleus | 22.97 | 26.35 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.66 | 25.35 |
| KXG39125 | Sorghum | plastid | 20.48 | 24.32 |
| Solyc02g089050.2.1 | Tomato | nucleus | 15.77 | 23.3 |
Protein Annotations
| MapMan:13.4.1.2.2 | EntrezGene:8063864 | UniProt:C5X6S0 | ncoils:Coil | InterPro:DUF3741-assoc | InterPro:DUF4378 |
| EnsemblPlants:EER98557 | ProteinID:EER98557 | ProteinID:EER98557.1 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:LNG1/2 | PFAM:PF14309 |
| PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | EnsemblPlantsGene:SORBI_3002G142500 | unigene:Sbi.11656 | UniParc:UPI0001A8425F |
| RefSeq:XP_002462036.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:23341861..23347152
Molecular Weight (calculated)
120491.0 Da
IEP (calculated)
9.424
GRAVY (calculated)
-0.865
Length
1084 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLGLGA FAEDRRPDLH RQVGCVTGIL QAFDRRHPLA SSHKRLLPPP TATAGHALSS SPSKGGECTR YSPQIVLEKN SSKTWADSQR APATELSQTS
0101: YSSSPSSSFS SLDGNRSTQQ DLSSTDRMLF PERPFKSSPK LKSSFDSDNG LDYPDDAPTK SKNMPIVQSS LPTLGIRNLV KDSIYKDSRE LSVRICTEEE
0201: VKDHPSNCGD QPRQLNGPPH DSTQGKSKGL VDINESLRVL AKLREASWTP PESAHHARLS YDAPRFSYDG KEAASKLREV PRLSLDIKEG HLWNREIDSR
0301: SNPRSADRSS NTVTGSNAAI ETQQEQPACK RLPSVVAKLM GLEELPEHNQ STASSHAWKT VQESKQDAMF NPSSISSHDE HALRQQRNHD STARNLPNSK
0401: FPVETAPWKQ QERIVLPRRL PKGSKGAHAR EQPAASVFSD IEKRLKDLDF QQSNKDLRAL KQILDSMQAK GLLENKKREE ASMPKLYDGN HDGQEVAGVN
0501: MRLNTNTNNM WMPEENNAES SFKSPIVIMK PSKSANLFSE VDSSVFPLGG PSDPTQLQTS NSTDRRKASM INRTAKEQHA KFSQKVPTSQ PLVSYDRRSY
0601: GRNDDSSNNQ KSSSLLVTES SSRRQQLPRD GSISMQKNKN STSPRLLQRK LDSERRARPP IPSAEYNKIQ RQSGDRNNSE TVSPRSKFRR KLVRPQEGDD
0701: GMPNGLNNRT RSLNQHGNDM STKSNGNISV ASELDIISND RSAEVNVSNF EQGIGTPSGR NPQKVKISYD ASKDVPSVDP LAAISERPSP VSVLDSSFDQ
0801: EDLFPTSRTP NSLAVDDERQ TLEAPWKPSD RKPTEVAMQS KNNKLANVAS LLEKLQQLSV NKDEDAPPVD HIAFLCETES PDHRYVSEIL LASGLLMKDL
0901: GSGQAGLQLH SSGYPINPDL FHVLEQRKAG WASIPDSIHQ SRSGAKSDPK RAHRKLLFDT VNELLLQKFE KETAVYSVSS YTRAKDPPSK TPSGQQLLKL
1001: ISSGIEDLDM ERSSIWQKEG SVIPDAEILQ RLQGWSSFSK EFPGMVLEIE RSIFKELVDE VVHGESADGP EMKVAGRRRR RLFA
0101: YSSSPSSSFS SLDGNRSTQQ DLSSTDRMLF PERPFKSSPK LKSSFDSDNG LDYPDDAPTK SKNMPIVQSS LPTLGIRNLV KDSIYKDSRE LSVRICTEEE
0201: VKDHPSNCGD QPRQLNGPPH DSTQGKSKGL VDINESLRVL AKLREASWTP PESAHHARLS YDAPRFSYDG KEAASKLREV PRLSLDIKEG HLWNREIDSR
0301: SNPRSADRSS NTVTGSNAAI ETQQEQPACK RLPSVVAKLM GLEELPEHNQ STASSHAWKT VQESKQDAMF NPSSISSHDE HALRQQRNHD STARNLPNSK
0401: FPVETAPWKQ QERIVLPRRL PKGSKGAHAR EQPAASVFSD IEKRLKDLDF QQSNKDLRAL KQILDSMQAK GLLENKKREE ASMPKLYDGN HDGQEVAGVN
0501: MRLNTNTNNM WMPEENNAES SFKSPIVIMK PSKSANLFSE VDSSVFPLGG PSDPTQLQTS NSTDRRKASM INRTAKEQHA KFSQKVPTSQ PLVSYDRRSY
0601: GRNDDSSNNQ KSSSLLVTES SSRRQQLPRD GSISMQKNKN STSPRLLQRK LDSERRARPP IPSAEYNKIQ RQSGDRNNSE TVSPRSKFRR KLVRPQEGDD
0701: GMPNGLNNRT RSLNQHGNDM STKSNGNISV ASELDIISND RSAEVNVSNF EQGIGTPSGR NPQKVKISYD ASKDVPSVDP LAAISERPSP VSVLDSSFDQ
0801: EDLFPTSRTP NSLAVDDERQ TLEAPWKPSD RKPTEVAMQS KNNKLANVAS LLEKLQQLSV NKDEDAPPVD HIAFLCETES PDHRYVSEIL LASGLLMKDL
0901: GSGQAGLQLH SSGYPINPDL FHVLEQRKAG WASIPDSIHQ SRSGAKSDPK RAHRKLLFDT VNELLLQKFE KETAVYSVSS YTRAKDPPSK TPSGQQLLKL
1001: ISSGIEDLDM ERSSIWQKEG SVIPDAEILQ RLQGWSSFSK EFPGMVLEIE RSIFKELVDE VVHGESADGP EMKVAGRRRR RLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.