Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031037.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX81888 | Canola | nucleus | 81.92 | 82.21 |
| CDX83829 | Canola | cytosol | 59.28 | 60.29 |
| CDX96710 | Canola | nucleus | 61.44 | 58.56 |
| AT1G18620.2 | Thale cress | nucleus | 60.72 | 50.0 |
| CDY49132 | Canola | nucleus | 53.41 | 48.53 |
| CDY42438 | Canola | nucleus | 54.37 | 48.25 |
| KRH63201 | Soybean | nucleus | 46.71 | 35.42 |
| KRH54713 | Soybean | nucleus | 46.59 | 35.24 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 45.63 | 34.67 |
| KRH56796 | Soybean | nucleus | 41.32 | 32.83 |
| Solyc03g115000.2.1 | Tomato | nucleus | 42.63 | 32.6 |
| KRH03155 | Soybean | nucleus | 40.72 | 32.38 |
| PGSC0003DMT400063076 | Potato | nucleus | 42.28 | 32.33 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 33.41 | 28.56 |
| CDX85545 | Canola | nucleus | 26.47 | 27.52 |
| CDX69516 | Canola | nucleus | 28.98 | 27.01 |
| CDX90985 | Canola | nucleus | 27.43 | 26.85 |
| CDY60473 | Canola | nucleus | 26.47 | 26.76 |
| Os07t0603300-01 | Rice | nucleus | 30.06 | 26.7 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 30.42 | 26.62 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 30.42 | 26.6 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 29.94 | 26.32 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 30.06 | 26.2 |
| CDY26440 | Canola | nucleus | 27.78 | 25.98 |
| KXG36646 | Sorghum | nucleus | 29.82 | 25.96 |
| CDY43253 | Canola | nucleus | 25.87 | 25.96 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 29.22 | 25.66 |
| CDX91979 | Canola | nucleus | 26.23 | 25.61 |
| Zm00001d006828_P001 | Maize | nucleus | 29.22 | 25.55 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 27.43 | 25.28 |
| Os03t0418700-02 | Rice | nucleus | 28.02 | 25.27 |
| CDX74270 | Canola | nucleus | 25.51 | 24.85 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 30.66 | 24.02 |
| EER98557 | Sorghum | nucleus | 31.14 | 23.99 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 19.88 | 23.95 |
| Zm00001d019700_P006 | Maize | nucleus | 30.54 | 23.94 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 30.78 | 23.88 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 30.42 | 23.65 |
| Zm00001d005297_P006 | Maize | nucleus | 31.14 | 23.64 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 30.3 | 23.58 |
| Os07t0109400-01 | Rice | nucleus | 30.3 | 23.23 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 23.35 | 22.47 |
| KXG39125 | Sorghum | plastid | 24.43 | 22.34 |
Protein Annotations
| EnsemblPlants:CDY59655 | EnsemblPlantsGene:GSBRNA2T00027526001 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF3 | PFAM:PF14309 | PFAM:PF14383 | ProteinID:CDY59655 |
| ProteinID:CDY59655.1 | SEG:seg | UniParc:UPI0002542A6E | UniProt:A0A078J8G0 | MapMan:13.4.1.2.2 | : |
Description
BnaA09g56100DBnaA09g56100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8G0]
Coordinates
chrLK033792:+:12433..16305
Molecular Weight (calculated)
93385.7 Da
IEP (calculated)
10.239
GRAVY (calculated)
-0.759
Length
835 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARLLHTLA DENSDLQKKI GCMNGIFQLF DRHHVLTNRR KSLTLGNAHV NNINFERDSA LQVQDTNIIN SGNAQLTRVS TESSRVSFSS SCSSSSPLSS
101: DLNKETQPEI SPYDRVIFQE SPAMSQGSGL GLDLRDVVRD SMYREARGIS EVSRHNKRRD DSPRPPYGLK QSTPVDFNES CKALAKLNTS QYYYNEVDLK
201: DASRYYVDSH KKKSKSKKKV KESPKLSLDS RDHLDLKSGN NNKLVESFSR SSSVNKRPPS VVAKLMGLET LPGSPLRRDH KSDPFSRSLR ENSMNRTIRL
301: SPSSPRKDLA SSSTTSSPRW RSSEFVMKPL SSLRFPIEPA PWKKQACRPV KALLKDLEFK HSVKDLRAIN KIVEAMQTKS VKQQECSTNS RGLQSQVMPS
401: STMRGGPIVI MKPARLVERS CVPSSSLIPI HSLNREEESV NVKRNSTSKK AAKDNRNVTT RSAGAASPRL SHMKKHENEK RSRPPPIPSD SSKSRRQTNK
501: EPATSPGGRR SRQGGRKSQT VIETAKTVVS NLMKNASGDG SSEHPSPVSV LNASIYRDIK PSQASEGTKS TDHVTGGEED EWNPAYSFSK TTTTLSPEVN
601: RKKLQNVEHL VQKLKRLNSS HDEASQDYIA SLCENSGADT DHRYISEILL ASGLLLRDLA SESTTFQLHS SGHPINPELF LVLEQTKGSS GGSNEKKLNR
701: KLVFDAVNEM LVKKLAIVDA EPWMKRGKGM KRRVLSAQQL LKELCSEIET VQKEAKRRSD NLFLLGEQEE DFLKCMLDED MEMRSGKWTE FDDVVPGIVL
801: HLERLLFKDL VSEVVHGEID RLQPTPSRRV VITDS
101: DLNKETQPEI SPYDRVIFQE SPAMSQGSGL GLDLRDVVRD SMYREARGIS EVSRHNKRRD DSPRPPYGLK QSTPVDFNES CKALAKLNTS QYYYNEVDLK
201: DASRYYVDSH KKKSKSKKKV KESPKLSLDS RDHLDLKSGN NNKLVESFSR SSSVNKRPPS VVAKLMGLET LPGSPLRRDH KSDPFSRSLR ENSMNRTIRL
301: SPSSPRKDLA SSSTTSSPRW RSSEFVMKPL SSLRFPIEPA PWKKQACRPV KALLKDLEFK HSVKDLRAIN KIVEAMQTKS VKQQECSTNS RGLQSQVMPS
401: STMRGGPIVI MKPARLVERS CVPSSSLIPI HSLNREEESV NVKRNSTSKK AAKDNRNVTT RSAGAASPRL SHMKKHENEK RSRPPPIPSD SSKSRRQTNK
501: EPATSPGGRR SRQGGRKSQT VIETAKTVVS NLMKNASGDG SSEHPSPVSV LNASIYRDIK PSQASEGTKS TDHVTGGEED EWNPAYSFSK TTTTLSPEVN
601: RKKLQNVEHL VQKLKRLNSS HDEASQDYIA SLCENSGADT DHRYISEILL ASGLLLRDLA SESTTFQLHS SGHPINPELF LVLEQTKGSS GGSNEKKLNR
701: KLVFDAVNEM LVKKLAIVDA EPWMKRGKGM KRRVLSAQQL LKELCSEIET VQKEAKRRSD NLFLLGEQEE DFLKCMLDED MEMRSGKWTE FDDVVPGIVL
801: HLERLLFKDL VSEVVHGEID RLQPTPSRRV VITDS
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.