Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36646 | Sorghum | nucleus | 87.23 | 86.86 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 80.52 | 80.86 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 66.18 | 66.53 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 66.39 | 66.46 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 65.86 | 65.86 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 65.76 | 65.55 |
| Os07t0603300-01 | Rice | nucleus | 64.4 | 65.43 |
| CDX81888 | Canola | nucleus | 25.97 | 29.81 |
| Bra031037.1-P | Field mustard | nucleus | 25.55 | 29.22 |
| CDY59655 | Canola | nucleus | 25.55 | 29.22 |
| CDY42438 | Canola | nucleus | 28.59 | 29.01 |
| CDX83829 | Canola | cytosol | 24.92 | 28.99 |
| CDY49132 | Canola | nucleus | 27.33 | 28.4 |
| CDX96710 | Canola | nucleus | 25.34 | 27.63 |
| Bra008136.1-P | Field mustard | nucleus | 28.38 | 26.99 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 27.43 | 26.76 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 30.68 | 26.66 |
| CDX91979 | Canola | nucleus | 23.66 | 26.43 |
| CDX85545 | Canola | nucleus | 22.09 | 26.28 |
| KRH54713 | Soybean | nucleus | 30.37 | 26.27 |
| AT1G74160.1 | Thale cress | nucleus | 28.17 | 26.24 |
| CDY43253 | Canola | nucleus | 22.83 | 26.2 |
| KRH63201 | Soybean | nucleus | 30.05 | 26.07 |
| Bra039160.1-P | Field mustard | nucleus | 22.3 | 25.98 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 24.61 | 25.94 |
| Bra001034.1-P | Field mustard | nucleus | 23.14 | 25.79 |
| CDY60473 | Canola | nucleus | 22.3 | 25.79 |
| KRH18379 | Soybean | nucleus | 26.6 | 25.79 |
| KRG93656 | Soybean | nucleus | 26.49 | 25.61 |
| Bra008689.1-P | Field mustard | nucleus | 23.98 | 25.56 |
| CDX74270 | Canola | nucleus | 22.93 | 25.55 |
| CDX69516 | Canola | nucleus | 23.77 | 25.33 |
| Bra023526.1-P | Field mustard | nucleus | 22.51 | 25.26 |
| KRH56796 | Soybean | nucleus | 27.64 | 25.12 |
| Zm00001d019700_P006 | Maize | nucleus | 27.85 | 24.98 |
| PGSC0003DMT400063076 | Potato | nucleus | 28.27 | 24.73 |
| Solyc03g115000.2.1 | Tomato | nucleus | 28.27 | 24.73 |
| KRH03155 | Soybean | nucleus | 27.12 | 24.67 |
| Zm00001d005297_P006 | Maize | nucleus | 28.38 | 24.64 |
| AT1G18620.2 | Thale cress | nucleus | 25.65 | 24.16 |
| AT5G15580.1 | Thale cress | nucleus | 23.25 | 23.95 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.78 | 23.94 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.66 | 23.92 |
| CDX90985 | Canola | nucleus | 21.26 | 23.8 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.17 | 23.67 |
| CDY26440 | Canola | nucleus | 22.09 | 23.63 |
| KRH01314 | Soybean | nucleus | 24.08 | 23.61 |
| KRH45061 | Soybean | nucleus | 23.98 | 23.54 |
| AT3G02170.1 | Thale cress | nucleus | 22.2 | 23.43 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 21.05 | 23.16 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.54 | 21.53 |
Protein Annotations
| EMBL:BT055700 | EnsemblPlants:Zm00001d006828_P001 | EnsemblPlants:Zm00001d006828_T001 | EnsemblPlantsGene:Zm00001d006828 | EntrezGene:100280168 | GO:GO:0008150 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 |
| InterPro:DUF4378 | InterPro:LNG1/2 | ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 |
| ProteinID:ONM25182.1 | SEG:seg | UniParc:UPI0001917624 | UniProt:B8A2A8 | MapMan:13.4.1.2.2 | : |
Description
Protein LONGIFOLIA 2
Coordinates
chr2:-:217457356..217462858
Molecular Weight (calculated)
104863.0 Da
IEP (calculated)
9.969
GRAVY (calculated)
-0.698
Length
955 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPARVRGAA AGLADDARDL QRQMGCMAGI LQIFDRQRLI AGAAGRQAAR QRQAHKRLPP PSAPPPGNTH SNSSSNVPVQ SSSTSKIVLE KTFSKCMTEN
101: SSLSIESSRA SSSSSSCSSF SSLDGNKSVQ QELPYINEEL FVQRSLKTSP SLKESDMNTK SGHPNVGFRD IVKDSINRDP GGLTVKTSVQ EARRNGQYKD
201: SPRPLLLSKS MDGTCIIGID RTTKVPANVT ESGRCLQERS RFSCDDRRLL RPAETQECKR PSSRLKELPR LSLDSRKESL SPGSRQKSIS YKRTDDILLD
301: TLRPQDSPSN RRANSVIAKL MGLEEATNAT GVLTADSCEP TRSPRPAQAT QHERPSRSPK NTCQDSCSMQ PKNQLKAKPS QRIATEAAPW RQQDRSANNT
401: KAEQCREAEG RARTASVYAD IERSGGFNFL ECNNKDFRAL RILGALNAKD AKSKNDSSGG SVAIHRTGYD LTTSSGSFQA PIVVMKPART TEKHGVSLAS
501: VAPIAGLRSL RKLPAGRYSS FTGTNDKMQL RMSRDQSKSE ETVSSASSPR PTSSSSPRNV LKKSEPERRS RPPVSPKSPS KKSNEAVSPK GRTRSKPSQV
601: KCHRDEVLQI TGNRISLAKQ VDVSIMDCPK PLGGNSTFVP EGNTAATASQ KAASILGSDQ NIHSLDNIPS PVSVLDASFY HKRISDSFKD GETHSSEECW
701: NPNSLPDTPQ SKANSEVNQI KPENLEVLIQ KLEQLQSMSE EDASIKEVMA SVAANKDHQY IYEIMLASGL LHKEHSVTAL PGQLQPSNYP INPELFLILE
801: QTRPVSVSAF QTVGGAKRSC KPCAGKLHRR LVFDLVNETI AQKMSICRSG SQPVKFLRSR KLSGWQLFKD LCAVVDRLTK CSEEEENENM VLDEDAINGT
901: KDWMSFDTVL HGMVWEIERS IFKGLIDEVV SGETTEKMRF GQRKLQRQLS FGSTN
101: SSLSIESSRA SSSSSSCSSF SSLDGNKSVQ QELPYINEEL FVQRSLKTSP SLKESDMNTK SGHPNVGFRD IVKDSINRDP GGLTVKTSVQ EARRNGQYKD
201: SPRPLLLSKS MDGTCIIGID RTTKVPANVT ESGRCLQERS RFSCDDRRLL RPAETQECKR PSSRLKELPR LSLDSRKESL SPGSRQKSIS YKRTDDILLD
301: TLRPQDSPSN RRANSVIAKL MGLEEATNAT GVLTADSCEP TRSPRPAQAT QHERPSRSPK NTCQDSCSMQ PKNQLKAKPS QRIATEAAPW RQQDRSANNT
401: KAEQCREAEG RARTASVYAD IERSGGFNFL ECNNKDFRAL RILGALNAKD AKSKNDSSGG SVAIHRTGYD LTTSSGSFQA PIVVMKPART TEKHGVSLAS
501: VAPIAGLRSL RKLPAGRYSS FTGTNDKMQL RMSRDQSKSE ETVSSASSPR PTSSSSPRNV LKKSEPERRS RPPVSPKSPS KKSNEAVSPK GRTRSKPSQV
601: KCHRDEVLQI TGNRISLAKQ VDVSIMDCPK PLGGNSTFVP EGNTAATASQ KAASILGSDQ NIHSLDNIPS PVSVLDASFY HKRISDSFKD GETHSSEECW
701: NPNSLPDTPQ SKANSEVNQI KPENLEVLIQ KLEQLQSMSE EDASIKEVMA SVAANKDHQY IYEIMLASGL LHKEHSVTAL PGQLQPSNYP INPELFLILE
801: QTRPVSVSAF QTVGGAKRSC KPCAGKLHRR LVFDLVNETI AQKMSICRSG SQPVKFLRSR KLSGWQLFKD LCAVVDRLTK CSEEEENENM VLDEDAINGT
901: KDWMSFDTVL HGMVWEIERS IFKGLIDEVV SGETTEKMRF GQRKLQRQLS FGSTN
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.