Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P14410_001 | Banana | nucleus | 36.2 | 37.79 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.76 | 35.21 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 23.95 | 31.31 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 31.57 | 29.27 |
| CDX81888 | Canola | nucleus | 25.39 | 27.64 |
| CDY59655 | Canola | nucleus | 25.28 | 27.43 |
| Bra031037.1-P | Field mustard | nucleus | 25.28 | 27.43 |
| CDY49132 | Canola | nucleus | 27.59 | 27.2 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 32.67 | 26.93 |
| CDY42438 | Canola | nucleus | 27.92 | 26.89 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.81 | 26.66 |
| CDX83829 | Canola | cytosol | 23.95 | 26.43 |
| Solyc03g115000.2.1 | Tomato | nucleus | 31.46 | 26.1 |
| PGSC0003DMT400063076 | Potato | nucleus | 31.13 | 25.82 |
| CDX96710 | Canola | nucleus | 24.83 | 25.68 |
| Bra008136.1-P | Field mustard | nucleus | 28.26 | 25.5 |
| Bra039160.1-P | Field mustard | nucleus | 23.07 | 25.49 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 26.71 | 25.47 |
| Os07t0603300-01 | Rice | nucleus | 26.38 | 25.43 |
| CDY60473 | Canola | nucleus | 22.96 | 25.18 |
| KRH63201 | Soybean | nucleus | 30.57 | 25.16 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 26.49 | 25.16 |
| CDX85545 | Canola | nucleus | 22.3 | 25.16 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 26.38 | 25.03 |
| KXG36646 | Sorghum | nucleus | 26.49 | 25.03 |
| CDY43253 | Canola | nucleus | 22.96 | 25.0 |
| AT1G74160.1 | Thale cress | nucleus | 28.26 | 24.98 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 26.27 | 24.84 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 26.05 | 24.82 |
| Bra023526.1-P | Field mustard | nucleus | 23.18 | 24.68 |
| KRH54713 | Soybean | nucleus | 30.02 | 24.64 |
| Zm00001d006828_P001 | Maize | nucleus | 25.94 | 24.61 |
| Os03t0418700-02 | Rice | nucleus | 24.83 | 24.3 |
| KRH03155 | Soybean | nucleus | 28.15 | 24.29 |
| Bra008689.1-P | Field mustard | nucleus | 23.84 | 24.11 |
| CDX69516 | Canola | nucleus | 23.73 | 24.0 |
| CDX91979 | Canola | nucleus | 22.63 | 23.98 |
| KRH56796 | Soybean | nucleus | 27.7 | 23.88 |
| CDX90985 | Canola | nucleus | 22.41 | 23.8 |
| Bra001034.1-P | Field mustard | nucleus | 22.19 | 23.45 |
| PGSC0003DMT400003717 | Potato | nucleus | 24.39 | 23.39 |
| CDX74270 | Canola | nucleus | 21.96 | 23.22 |
| KRH01314 | Soybean | nucleus | 24.61 | 22.9 |
| CDY26440 | Canola | nucleus | 22.3 | 22.62 |
| AT5G15580.1 | Thale cress | nucleus | 23.07 | 22.55 |
| AT1G18620.2 | Thale cress | nucleus | 24.83 | 22.19 |
| AT3G02170.1 | Thale cress | nucleus | 22.08 | 22.1 |
| KRH45061 | Soybean | nucleus | 23.62 | 21.99 |
| KRG93656 | Soybean | nucleus | 23.62 | 21.66 |
| KXG39125 | Sorghum | plastid | 21.52 | 21.36 |
| KRH18379 | Soybean | nucleus | 23.07 | 21.22 |
| Solyc02g089050.2.1 | Tomato | nucleus | 15.45 | 19.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P07300_001 | EnsemblPlants:GSMUA_Achr4T07300_001 | EnsemblPlantsGene:GSMUA_Achr4G07300_001 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 |
| PANTHER:PTHR31680 | PFAM:PF14309 | SEG:seg | UniParc:UPI00029488C9 | UniProt:M0SLU7 | MapMan:13.4.1.2.2 |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G07300_001]
Coordinates
chr4:-:5439643..5444811
Molecular Weight (calculated)
102941.0 Da
IEP (calculated)
9.611
GRAVY (calculated)
-0.718
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAKLLDAFT DENMDLQKQI GCIAGIFQMF DRHHLLIGKR LNDHNHRKLP SGHVLPKNGR RESEQKPRFS QILREKNLSK SLNETQTASM ESSRASCSSS
101: SSSYSSLESV KASRQEACSF DRAFFQEKSL LANSPEVKKP EDDAKSISFD SCSSTPKAIL QTLDFHNAVR DPIKKGAQGF PTRTASTEKV NNHEVKHKDT
201: PRPVLLAKTR MPADLNEAIR LLVELKEAPW RTRDAKGDQL PHAVQSRDST IAKPKDHHSP LKHKSKIMTE TAPWTQQTPQ KARTGYQEAQ FIYQEIEERL
301: KGPKFQQQKK DLRALKQIVA AMHAKRLAQT TKDNDYPYKI SVWKQPAQEG SSPKAFDPPI VVMKPAKNVR ISDASGHTVV LLEGLSNLPK LLTSSAGNRK
401: KSSANITAER DHSPRVRLGE SNIQSLLSTT DRQIIRSILS PRLQQRKTEA EKQPCPLTPN MNKAQSEHNN RKPVESVSPR HKLRLKQSQV QKREDQVDVD
501: EIICEKRVSS RRNDETSPGS NKSRSFALQS SVLQHRIPSS RASQIATLNN LGILYRFFLK KLCFTWTQHI SDKELTSITF EYPSPVSVLD SSCYEDQFSP
601: SPVKRTPDAV KGEHLFYEFS DTEPCTLDLY CHPKNSSKMN DETSLKKLQD FENLVQIKML KSADAELPTT DFITSKCNMD NPDHNYVSEI LLATGILNKD
701: CRVPLQLYTS GHAINPELFG VLEQPKHGWF SKCELDKEET QHQKTNTEKN HRKLVFDVVN EIISHKMEST AYGNGLDLLC QFRRKLSGQQ LVLEEVCSQI
801: RRLRTEKTRS TSLEDDVEFI AGEDILYRSE GWVDFSVEQS RVALQIERLI FKDLIDEVLS GVTEAGLQIK PRMALLRPRR FFFLGPNIPQ KNIEHFSNPI
901: NAGTPH
101: SSSYSSLESV KASRQEACSF DRAFFQEKSL LANSPEVKKP EDDAKSISFD SCSSTPKAIL QTLDFHNAVR DPIKKGAQGF PTRTASTEKV NNHEVKHKDT
201: PRPVLLAKTR MPADLNEAIR LLVELKEAPW RTRDAKGDQL PHAVQSRDST IAKPKDHHSP LKHKSKIMTE TAPWTQQTPQ KARTGYQEAQ FIYQEIEERL
301: KGPKFQQQKK DLRALKQIVA AMHAKRLAQT TKDNDYPYKI SVWKQPAQEG SSPKAFDPPI VVMKPAKNVR ISDASGHTVV LLEGLSNLPK LLTSSAGNRK
401: KSSANITAER DHSPRVRLGE SNIQSLLSTT DRQIIRSILS PRLQQRKTEA EKQPCPLTPN MNKAQSEHNN RKPVESVSPR HKLRLKQSQV QKREDQVDVD
501: EIICEKRVSS RRNDETSPGS NKSRSFALQS SVLQHRIPSS RASQIATLNN LGILYRFFLK KLCFTWTQHI SDKELTSITF EYPSPVSVLD SSCYEDQFSP
601: SPVKRTPDAV KGEHLFYEFS DTEPCTLDLY CHPKNSSKMN DETSLKKLQD FENLVQIKML KSADAELPTT DFITSKCNMD NPDHNYVSEI LLATGILNKD
701: CRVPLQLYTS GHAINPELFG VLEQPKHGWF SKCELDKEET QHQKTNTEKN HRKLVFDVVN EIISHKMEST AYGNGLDLLC QFRRKLSGQQ LVLEEVCSQI
801: RRLRTEKTRS TSLEDDVEFI AGEDILYRSE GWVDFSVEQS RVALQIERLI FKDLIDEVLS GVTEAGLQIK PRMALLRPRR FFFLGPNIPQ KNIEHFSNPI
901: NAGTPH
001: MTEGNGFSHL GLDLRDVVRD SMYREARGLL SKTPMTREEV VRQSRREDSP RPYGLKQSTP MDLNESFRVL ARLRETSQHY NELGMKDAPR YSVDSHDTLK
101: SRQKLKELPR LSLDSRERAT RNSSVDPKSS KLSESFSESC SSSSKKRPPS VVAKLMGLET LPGSPLGRDI HQFGLNKTNI SDQNDDPFSR SLREKNLNRA
201: IRFSPSSPRS LGKDPASPRW RNSDFVMKPL SNTRFPVEPA PWKHADRNRV LQKQASMPVK AKPYEAPNFP PTVYSEMERR LNDLEFKHSG KDLRALKQIL
301: ESMQSKGFLD TEKQQQSTNF AVQRDYEREN SATSNHAMSS RTRVQSSSSN QVYQSPIVIM KPAKLVEKAG IPASSLIPIH SLTGIKKIRR EKPDDKGTSA
401: SNSKRVTKDC SPGNRRAESC TSSFDKKSDS RNVRSSSKKP QQVSKESASK SSGSVSPRLQ QKKLEYDKRS RPPTPPDSSK SRKPSNQQLV ESTSPGGRRR
501: PKGQKSLQQV DDQLSQASNE SRTSSHGICT QSETEASACV EKSTEADGGK SPSVIEAAKA VVSNLMQNKS SPRFSEDGLS ANLSLVALEH PSPISVLDAS
601: TYRETEPSPV KTQGNVAHDF GDENCEDQWN PAYSFSETTS SFSPEINRKK LQNVEHLVQK LRRLNSSHDE ASQDYIASLC ENADPTTDHR YISEILLASG
701: LLLRDLGSGL TTFQLHPSGH PINPELFFVL EQTKGSSTTH LLHKEESKVL KNEKLNRKLV FDLVNEILVE KLASVEATTN PLMKSYAKVT KKAVSAQQLL
801: KELCSAIETQ QKQATKRSEN FLLEEEDDFL KSILAEDVTI RSGNWADFSG EMSGLVLDVE RLVFKDLVNE IVHAETSRLQ AKSGRRRTLF ADQ
101: SRQKLKELPR LSLDSRERAT RNSSVDPKSS KLSESFSESC SSSSKKRPPS VVAKLMGLET LPGSPLGRDI HQFGLNKTNI SDQNDDPFSR SLREKNLNRA
201: IRFSPSSPRS LGKDPASPRW RNSDFVMKPL SNTRFPVEPA PWKHADRNRV LQKQASMPVK AKPYEAPNFP PTVYSEMERR LNDLEFKHSG KDLRALKQIL
301: ESMQSKGFLD TEKQQQSTNF AVQRDYEREN SATSNHAMSS RTRVQSSSSN QVYQSPIVIM KPAKLVEKAG IPASSLIPIH SLTGIKKIRR EKPDDKGTSA
401: SNSKRVTKDC SPGNRRAESC TSSFDKKSDS RNVRSSSKKP QQVSKESASK SSGSVSPRLQ QKKLEYDKRS RPPTPPDSSK SRKPSNQQLV ESTSPGGRRR
501: PKGQKSLQQV DDQLSQASNE SRTSSHGICT QSETEASACV EKSTEADGGK SPSVIEAAKA VVSNLMQNKS SPRFSEDGLS ANLSLVALEH PSPISVLDAS
601: TYRETEPSPV KTQGNVAHDF GDENCEDQWN PAYSFSETTS SFSPEINRKK LQNVEHLVQK LRRLNSSHDE ASQDYIASLC ENADPTTDHR YISEILLASG
701: LLLRDLGSGL TTFQLHPSGH PINPELFFVL EQTKGSSTTH LLHKEESKVL KNEKLNRKLV FDLVNEILVE KLASVEATTN PLMKSYAKVT KKAVSAQQLL
801: KELCSAIETQ QKQATKRSEN FLLEEEDDFL KSILAEDVTI RSGNWADFSG EMSGLVLDVE RLVFKDLVNE IVHAETSRLQ AKSGRRRTLF ADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.