Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45061 | Soybean | nucleus | 83.47 | 83.56 |
| KRH18379 | Soybean | nucleus | 53.49 | 52.89 |
| KRG93656 | Soybean | nucleus | 50.51 | 49.8 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.87 | 39.44 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 36.45 | 36.26 |
| CDX85545 | Canola | nucleus | 27.82 | 33.75 |
| Bra023526.1-P | Field mustard | nucleus | 28.44 | 32.55 |
| KRH63201 | Soybean | nucleus | 36.34 | 32.15 |
| Bra008689.1-P | Field mustard | nucleus | 29.36 | 31.92 |
| KRH54713 | Soybean | nucleus | 35.93 | 31.7 |
| CDX69516 | Canola | nucleus | 29.16 | 31.7 |
| PGSC0003DMT400003717 | Potato | nucleus | 30.7 | 31.64 |
| KRH03155 | Soybean | nucleus | 33.88 | 31.43 |
| KRH56796 | Soybean | nucleus | 33.47 | 31.02 |
| Bra039160.1-P | Field mustard | nucleus | 25.98 | 30.85 |
| AT5G15580.1 | Thale cress | nucleus | 29.16 | 30.64 |
| CDX91979 | Canola | nucleus | 26.8 | 30.53 |
| CDY60473 | Canola | nucleus | 25.87 | 30.51 |
| Bra001034.1-P | Field mustard | nucleus | 26.69 | 30.34 |
| CDY43253 | Canola | nucleus | 25.67 | 30.05 |
| CDX90985 | Canola | nucleus | 26.28 | 30.01 |
| CDX74270 | Canola | nucleus | 26.39 | 29.99 |
| Solyc02g089050.2.1 | Tomato | nucleus | 22.59 | 29.97 |
| CDY26440 | Canola | nucleus | 27.41 | 29.9 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 28.95 | 28.86 |
| AT3G02170.1 | Thale cress | nucleus | 26.28 | 28.29 |
| Os07t0603300-01 | Rice | nucleus | 25.05 | 25.96 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 25.05 | 25.58 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 25.05 | 25.47 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 24.74 | 25.37 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 27.52 | 25.14 |
| EER98557 | Sorghum | nucleus | 27.82 | 25.0 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 24.44 | 24.92 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 27.52 | 24.91 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 27.21 | 24.7 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 27.21 | 24.67 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 22.9 | 24.61 |
| Os03t0418700-02 | Rice | nucleus | 23.31 | 24.51 |
| KXG36646 | Sorghum | nucleus | 23.92 | 24.3 |
| Os07t0109400-01 | Rice | nucleus | 27.1 | 24.24 |
| Zm00001d005297_P006 | Maize | nucleus | 27.21 | 24.09 |
| Zm00001d006828_P001 | Maize | nucleus | 23.61 | 24.08 |
| Zm00001d019700_P006 | Maize | nucleus | 26.18 | 23.94 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 16.84 | 23.67 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 23.1 | 23.66 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.94 | 23.5 |
| KXG39125 | Sorghum | plastid | 21.46 | 22.89 |
Protein Annotations
| EntrezGene:102660880 | MapMan:13.4.1.2.2 | EMBL:ACUP02011511 | ncoils:Coil | InterPro:DUF3741-assoc | InterPro:DUF4378 |
| EnsemblPlantsGene:GLYMA_18G268900 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | GO:GO:0051513 | UniProt:I1N4L9 | EnsemblPlants:KRH01314 | ProteinID:KRH01314 | ProteinID:KRH01314.1 |
| ProteinID:KRH01315.1 | InterPro:LNG1/2 | PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 |
| UniParc:UPI00023D83CF | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:55259873..55265930
Molecular Weight (calculated)
109263.0 Da
IEP (calculated)
10.034
GRAVY (calculated)
-0.871
Length
974 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKALKSLK DENPDLQKQI GCITGFFQLF DRHRFLTGQR SATYVQHRPT SGGSSNEIQE LNGTMQKAKA KNLKSAREKQ QFSTESSITS LSSSSCSSSM
101: SSHEFNKTIQ IQSPSRNQTR IPENTNSKAA KKQPHKPHQQ SLHFHHIVND SMHKEARRLS VKTGAKEEKK GQTNALKHID SPRPLRSHKS VNGGETVANE
201: PLHSLAKSKK KPWDSPRLSY DETFKSATKH KELPRLSLDS REGSNRGFNE GNKSQNQLKG SPRWYGRTSS TMINQLKEPE TSKRSSSVVA KLMGLEALPE
301: CTQTCGSPKG TSSSSTKKNE LLSRSCTSDE DKQRQRFTLP HSKKADSITN MMPYSRFAIE STPWRQPDTI QSSQLQASKG SESDIKASKS SLTVYGEIEK
401: RVAELEFKKS GKDLRALKQI LEAMQRHKYS VDIARDQASN SPSNNRNNTN LNESSKIQSP RVRQKDTASV TAEMSNSTQG SKLPIVIMKP AKVTRKPNNL
501: SSTELSIHGK SGLSKCSPSN PTNGRLVDKQ IARGISSTTK NIKDPFGQEV CSSDKNNMRT SKLMQSMKVS QDSNGECTTN YGYINVTGSP RPQKKFGLER
601: CSRPTSPSSD SRINRREHNR QPVELSSPSS TPRHKFSTLQ QRNERFSEIS CHWRDFKHHV NIISDFDDKS SSASHSDIEV IRIDQSGKII SSSIQLSGMS
701: QNNAFEELRK AETMITAEQP SPVSVLDAAF YKDDPPSPVK NKSDISKNLG EALSTDEDSE ESSVDLLQEI DWIDEKLFNF NNNRDPDHKY IAQILLASGL
801: LSGHSYSQIF HSPGHLINPK LFFALEQMKR KRPLNIEGSA KKIPRNINPE QMQRKLIFDV VNDILVQKLI LDSSSALWCQ PNELAGTTLK GKQLLDELCT
901: EIDQLQPQNR NVSLVHEEEN LKHHQAIWTN CCNEMPNIVL DVERLIFKDL ITEVVRGEVA NHPGTHCRQL VFYK
101: SSHEFNKTIQ IQSPSRNQTR IPENTNSKAA KKQPHKPHQQ SLHFHHIVND SMHKEARRLS VKTGAKEEKK GQTNALKHID SPRPLRSHKS VNGGETVANE
201: PLHSLAKSKK KPWDSPRLSY DETFKSATKH KELPRLSLDS REGSNRGFNE GNKSQNQLKG SPRWYGRTSS TMINQLKEPE TSKRSSSVVA KLMGLEALPE
301: CTQTCGSPKG TSSSSTKKNE LLSRSCTSDE DKQRQRFTLP HSKKADSITN MMPYSRFAIE STPWRQPDTI QSSQLQASKG SESDIKASKS SLTVYGEIEK
401: RVAELEFKKS GKDLRALKQI LEAMQRHKYS VDIARDQASN SPSNNRNNTN LNESSKIQSP RVRQKDTASV TAEMSNSTQG SKLPIVIMKP AKVTRKPNNL
501: SSTELSIHGK SGLSKCSPSN PTNGRLVDKQ IARGISSTTK NIKDPFGQEV CSSDKNNMRT SKLMQSMKVS QDSNGECTTN YGYINVTGSP RPQKKFGLER
601: CSRPTSPSSD SRINRREHNR QPVELSSPSS TPRHKFSTLQ QRNERFSEIS CHWRDFKHHV NIISDFDDKS SSASHSDIEV IRIDQSGKII SSSIQLSGMS
701: QNNAFEELRK AETMITAEQP SPVSVLDAAF YKDDPPSPVK NKSDISKNLG EALSTDEDSE ESSVDLLQEI DWIDEKLFNF NNNRDPDHKY IAQILLASGL
801: LSGHSYSQIF HSPGHLINPK LFFALEQMKR KRPLNIEGSA KKIPRNINPE QMQRKLIFDV VNDILVQKLI LDSSSALWCQ PNELAGTTLK GKQLLDELCT
901: EIDQLQPQNR NVSLVHEEEN LKHHQAIWTN CCNEMPNIVL DVERLIFKDL ITEVVRGEVA NHPGTHCRQL VFYK
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.