Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98557 | Sorghum | nucleus | 86.85 | 85.33 |
| Zm00001d005297_P006 | Maize | nucleus | 81.03 | 78.45 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 61.22 | 61.16 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 61.69 | 61.06 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 61.41 | 60.95 |
| Os07t0109400-01 | Rice | nucleus | 61.88 | 60.51 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 60.56 | 60.06 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 33.9 | 36.95 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 34.08 | 33.03 |
| CDY42438 | Canola | nucleus | 28.92 | 32.73 |
| CDY49132 | Canola | nucleus | 27.23 | 31.56 |
| Solyc03g115000.2.1 | Tomato | nucleus | 32.02 | 31.23 |
| CDX81888 | Canola | nucleus | 24.32 | 31.13 |
| PGSC0003DMT400063076 | Potato | nucleus | 31.83 | 31.04 |
| KRH54713 | Soybean | nucleus | 32.11 | 30.98 |
| Bra008136.1-P | Field mustard | nucleus | 29.2 | 30.98 |
| AT1G74160.1 | Thale cress | nucleus | 29.77 | 30.93 |
| KRH63201 | Soybean | nucleus | 31.83 | 30.79 |
| CDX83829 | Canola | cytosol | 23.57 | 30.57 |
| CDY59655 | Canola | nucleus | 23.94 | 30.54 |
| Bra031037.1-P | Field mustard | nucleus | 23.94 | 30.54 |
| KRH56796 | Soybean | nucleus | 30.05 | 30.45 |
| Bra039160.1-P | Field mustard | nucleus | 23.38 | 30.37 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 27.89 | 30.34 |
| CDX96710 | Canola | nucleus | 24.69 | 30.02 |
| KRH03155 | Soybean | nucleus | 29.39 | 29.81 |
| CDY43253 | Canola | nucleus | 23.29 | 29.81 |
| CDY60473 | Canola | nucleus | 23.0 | 29.66 |
| CDX85545 | Canola | nucleus | 22.07 | 29.27 |
| CDX91979 | Canola | nucleus | 23.19 | 28.89 |
| Bra008689.1-P | Field mustard | nucleus | 23.85 | 28.35 |
| Bra023526.1-P | Field mustard | nucleus | 22.63 | 28.32 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.88 | 28.17 |
| AT5G15580.1 | Thale cress | nucleus | 24.41 | 28.05 |
| CDX69516 | Canola | nucleus | 23.57 | 28.01 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 24.88 | 27.87 |
| Zm00001d006828_P001 | Maize | nucleus | 24.98 | 27.85 |
| Bra001034.1-P | Field mustard | nucleus | 22.16 | 27.54 |
| AT3G02170.1 | Thale cress | nucleus | 23.38 | 27.51 |
| CDX74270 | Canola | nucleus | 22.07 | 27.42 |
| CDY26440 | Canola | nucleus | 22.82 | 27.21 |
| AT1G18620.2 | Thale cress | nucleus | 25.54 | 26.82 |
| KRH45061 | Soybean | nucleus | 24.41 | 26.72 |
| CDX90985 | Canola | nucleus | 21.13 | 26.38 |
| KRH01314 | Soybean | nucleus | 23.94 | 26.18 |
| KRH18379 | Soybean | nucleus | 23.85 | 25.79 |
| KRG93656 | Soybean | nucleus | 23.76 | 25.61 |
| PGSC0003DMT400003717 | Potato | nucleus | 22.44 | 25.29 |
| Solyc02g089050.2.1 | Tomato | nucleus | 14.84 | 21.53 |
Protein Annotations
| EntrezGene:100279500 | MapMan:13.4.1.2.2 | UniProt:A0A1D6HZT8 | ncoils:Coil | InterPro:DUF3741-assoc | InterPro:DUF4378 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 |
| GO:GO:0051513 | InterPro:LNG1/2 | ProteinID:ONM53572.1 | PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 |
| PANTHER:PTHR31680:SF6 | UniParc:UPI0004DEA795 | EnsemblPlantsGene:Zm00001d019700 | EnsemblPlants:Zm00001d019700_P006 | EnsemblPlants:Zm00001d019700_T006 | SEG:seg |
Description
Protein LONGIFOLIA 2
Coordinates
chr7:+:51770834..51776596
Molecular Weight (calculated)
118537.0 Da
IEP (calculated)
9.059
GRAVY (calculated)
-0.857
Length
1065 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLGALA EDRRPDLYRQ VGCVTGILQA FDRRHHLASS HKRLLPPTAG HAPSNPSKGG ECTRYSPQVV LEKNSSKTWA DSQRAPATEL SQTSYSSSPS
0101: SSFSSLDGNR STQQDLSSTD RMLFPERPFK SSPKLKSSFD SDNGLDYPDD ALTKSKNMPI VQSSLPTLGI RNLVKDSIYK DSHELSVRIS TEEEVKDHPS
0201: NCGDQPMQLN GPHHDSTQGK SKGLMDINES LRVLAKLREA SWTPPESVHH ARLSYDAPRF SYDGKEATSK LREVPRLSLD IKEGHLWNRE IDSRLDPSLS
0301: SADRNSNTVT GSNAAFETQQ EQPACKRLPS VVAKLMGLEE LPEHNQSTAS SHACNTVQEN KQDAMLNSLS ISYQYEHAPQ QERNPDSTVR NLPNSKFPVQ
0401: TAPWKQQERI VLPRKLPKGS KGAHGREPAA PWNQLKDLDF QQPNKDLRAL KQILDSAKGL LENKKREEAF MPKLYNGNHD DQEMASANMR LNRNTNNMWM
0501: PEESNAESSF KSPIVIMKPS KSANLYSKVD SSVFPLGGSS DLPQPQTSNS TDRRKASTIN RTAKGQYAKL SPRVPTSQPL VSCDRRSYGR NDDSSNNQKS
0601: SSLLVTESST RRQQLPRNSS VSMQKNKNST SPKLLQRKLD PERRARPPIP SAESNKSERQ SGDRNNSETV SPRSKFRRKL VRPQGDDGMP IGLNNRTRSL
0701: YQHDNDMSIR SDGSISVASE LDIISNDRST GVNISNFEQG IGTPSGRNPQ KVKTSYDANM DVPSVDPSAA ISERPSPVSV LDSSFDQEDL FPTSRTPNSL
0801: AVDDERETLE EPWKPSVAIQ SKNNKLANVA SLLEKLQQLS VNKDEDAPPV DHIAFLCETE SPDHRYVSEI LLASGLLMKD LGSGQTGLQL HSSGYPINPD
0901: LFHVLEQRKA GWVSTPDGIH QSRSGTKSDP RRAHRKLMFD TVNELLLQKF EKETAVYALS SFTRAKDPPA KTFSGQQLPK FISSGIEELD MERSSISQKD
1001: SSVIPDAEIL RRLQGWTSFS KELPGMVLEI ERSIFKELVD EVVHGESADG PEMKAAGRRR RRLFA
0101: SSFSSLDGNR STQQDLSSTD RMLFPERPFK SSPKLKSSFD SDNGLDYPDD ALTKSKNMPI VQSSLPTLGI RNLVKDSIYK DSHELSVRIS TEEEVKDHPS
0201: NCGDQPMQLN GPHHDSTQGK SKGLMDINES LRVLAKLREA SWTPPESVHH ARLSYDAPRF SYDGKEATSK LREVPRLSLD IKEGHLWNRE IDSRLDPSLS
0301: SADRNSNTVT GSNAAFETQQ EQPACKRLPS VVAKLMGLEE LPEHNQSTAS SHACNTVQEN KQDAMLNSLS ISYQYEHAPQ QERNPDSTVR NLPNSKFPVQ
0401: TAPWKQQERI VLPRKLPKGS KGAHGREPAA PWNQLKDLDF QQPNKDLRAL KQILDSAKGL LENKKREEAF MPKLYNGNHD DQEMASANMR LNRNTNNMWM
0501: PEESNAESSF KSPIVIMKPS KSANLYSKVD SSVFPLGGSS DLPQPQTSNS TDRRKASTIN RTAKGQYAKL SPRVPTSQPL VSCDRRSYGR NDDSSNNQKS
0601: SSLLVTESST RRQQLPRNSS VSMQKNKNST SPKLLQRKLD PERRARPPIP SAESNKSERQ SGDRNNSETV SPRSKFRRKL VRPQGDDGMP IGLNNRTRSL
0701: YQHDNDMSIR SDGSISVASE LDIISNDRST GVNISNFEQG IGTPSGRNPQ KVKTSYDANM DVPSVDPSAA ISERPSPVSV LDSSFDQEDL FPTSRTPNSL
0801: AVDDERETLE EPWKPSVAIQ SKNNKLANVA SLLEKLQQLS VNKDEDAPPV DHIAFLCETE SPDHRYVSEI LLASGLLMKD LGSGQTGLQL HSSGYPINPD
0901: LFHVLEQRKA GWVSTPDGIH QSRSGTKSDP RRAHRKLMFD TVNELLLQKF EKETAVYALS SFTRAKDPPA KTFSGQQLPK FISSGIEELD MERSSISQKD
1001: SSVIPDAEIL RRLQGWTSFS KELPGMVLEI ERSIFKELVD EVVHGESADG PEMKAAGRRR RRLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.