Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G262900.1 | Wheat | cytosol | 96.46 | 96.19 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 94.13 | 94.75 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 94.5 | 94.41 |
| Os07t0109400-01 | Rice | nucleus | 68.31 | 67.31 |
| EER98557 | Sorghum | nucleus | 63.19 | 62.55 |
| Zm00001d019700_P006 | Maize | nucleus | 60.95 | 61.41 |
| Zm00001d005297_P006 | Maize | nucleus | 59.27 | 57.82 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 32.99 | 36.23 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.33 | 35.21 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 34.86 | 34.03 |
| CDY42438 | Canola | nucleus | 29.36 | 33.48 |
| CDY49132 | Canola | nucleus | 28.15 | 32.86 |
| Solyc03g115000.2.1 | Tomato | nucleus | 33.36 | 32.78 |
| PGSC0003DMT400063076 | Potato | nucleus | 33.27 | 32.69 |
| KRH54713 | Soybean | nucleus | 33.36 | 32.43 |
| KRH63201 | Soybean | nucleus | 33.27 | 32.43 |
| KRH56796 | Soybean | nucleus | 31.22 | 31.87 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.98 | 31.77 |
| Bra008136.1-P | Field mustard | nucleus | 29.54 | 31.57 |
| KRH03155 | Soybean | nucleus | 30.85 | 31.52 |
| CDX83829 | Canola | cytosol | 24.04 | 31.43 |
| CDX81888 | Canola | nucleus | 24.14 | 31.13 |
| CDX96710 | Canola | nucleus | 25.35 | 31.05 |
| AT1G74160.1 | Thale cress | nucleus | 29.54 | 30.93 |
| CDY59655 | Canola | nucleus | 23.58 | 30.3 |
| Bra031037.1-P | Field mustard | nucleus | 23.58 | 30.3 |
| CDY43253 | Canola | nucleus | 23.11 | 29.81 |
| CDX91979 | Canola | nucleus | 23.39 | 29.36 |
| CDX85545 | Canola | nucleus | 21.9 | 29.27 |
| CDY60473 | Canola | nucleus | 22.46 | 29.18 |
| AT5G15580.1 | Thale cress | nucleus | 24.98 | 28.91 |
| Bra039160.1-P | Field mustard | nucleus | 22.09 | 28.9 |
| Bra008689.1-P | Field mustard | nucleus | 24.04 | 28.79 |
| CDX74270 | Canola | nucleus | 22.93 | 28.7 |
| CDX69516 | Canola | nucleus | 23.95 | 28.68 |
| AT3G02170.1 | Thale cress | nucleus | 24.14 | 28.62 |
| Bra001034.1-P | Field mustard | nucleus | 22.74 | 28.47 |
| Bra023526.1-P | Field mustard | nucleus | 22.55 | 28.44 |
| CDX90985 | Canola | nucleus | 21.9 | 27.55 |
| CDY26440 | Canola | nucleus | 22.83 | 27.44 |
| KRH01314 | Soybean | nucleus | 24.7 | 27.21 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 24.23 | 27.14 |
| KRH18379 | Soybean | nucleus | 24.79 | 27.01 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.67 | 26.88 |
| AT1G18620.2 | Thale cress | nucleus | 25.26 | 26.73 |
| KRH45061 | Soybean | nucleus | 24.14 | 26.62 |
| KRG93656 | Soybean | nucleus | 24.42 | 26.52 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.31 | 23.84 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G261000.1 | EnsemblPlantsGene:TraesCS2A01G261000 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | PFAM:PF14309 | PFAM:PF14383 | SEG:seg |
| MapMan:13.4.1.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:411086982..411092602
Molecular Weight (calculated)
119697.0 Da
IEP (calculated)
9.566
GRAVY (calculated)
-0.876
Length
1073 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLQALG EDRRPDLHRQ IGCVTGILQA FDRRYPIAAH HSHKRLLPPG NALSSSPSVG EERTRYGPQI VLDKNFSKSW IENQRATSTM ETSSSSCSSF
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLDDTL TNTPSAQSSH PTLGIRNLVK DSIYRDTRDL SARTSTTEAV ADHTYNRGDP
0201: ATCLDESPSS DIQGKSKGTM DINESLRVLA KLRESSWSPS ESGHQPRLSY DAPRFSYDGR ESASKRREMP RLSLDIKEGP LRTREMDSRP KPNMDDTERS
0301: ISFGSDKESN AEIQKEQPAA SKRLPSVVAK LMGLEELPEP SDNKVISPQA PKSVQERKQE HILLPLSLSS HNEPARRQHR NLDATIRNVP NSKFPAETAP
0401: WKQERIVLPR KLPKGSKGAH GKEQPAASVY SEIEKRLNDL DFQHSNKDLR ALKQILDSMQ AKGLLQNKKR EEASMLKLYD DDYNNQEVTD ANPRLSCNTN
0501: SNQISEGAPS PSMEEESIAE KFFKSPIVIM KPANSADLLG DADPPVVPLR GLSDLPQLRT VNSTDKRKMP KINRAAVEQR LKSSPAAPAS QPLASDRRPN
0601: GRNEVMSRKQ KSSSQLMTES SSRRQQLPRD NNGMLKHKNS TSPRLPQKKL DMERRSRLPV PSPEANKNQR QSVDKSHLDT VSPRSKVRRK LAQGEDGHQN
0701: VAKSRTRSLN QQGDDMSLMS DGSMSVVSEL DIEVTSADRS AEVNASSFQQ GNQTPLGRNP QKVKTFYDAN KDLSSMDHAA AIPERPSPVS VLDYSFDQEN
0801: FFRTGKTSNS PNVDDQRHPS DAKPTKPTAQ SENNKLANVA SLLQKLQQLT VSKDDDEAPP VDHIAFLCET QIPDHRYVSE ILLASGLLMK DLGTGLSQIQ
0901: LHASGYPINP DLFLVLEQRK SGWTSKPEGF HQSRRSDDPK RAHRKLMFDA VNMLLLDKFE KKTSVHAASS LTGAREVSSG QQLVKAICSE IEYLKTERSR
1001: MCQEKSSSVI PDAEILHRLE GWTTSFGQQQ LPGMILEIER SIFKELVDEV VRGEAADGPQ ARAGRRGRRR LFA
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLDDTL TNTPSAQSSH PTLGIRNLVK DSIYRDTRDL SARTSTTEAV ADHTYNRGDP
0201: ATCLDESPSS DIQGKSKGTM DINESLRVLA KLRESSWSPS ESGHQPRLSY DAPRFSYDGR ESASKRREMP RLSLDIKEGP LRTREMDSRP KPNMDDTERS
0301: ISFGSDKESN AEIQKEQPAA SKRLPSVVAK LMGLEELPEP SDNKVISPQA PKSVQERKQE HILLPLSLSS HNEPARRQHR NLDATIRNVP NSKFPAETAP
0401: WKQERIVLPR KLPKGSKGAH GKEQPAASVY SEIEKRLNDL DFQHSNKDLR ALKQILDSMQ AKGLLQNKKR EEASMLKLYD DDYNNQEVTD ANPRLSCNTN
0501: SNQISEGAPS PSMEEESIAE KFFKSPIVIM KPANSADLLG DADPPVVPLR GLSDLPQLRT VNSTDKRKMP KINRAAVEQR LKSSPAAPAS QPLASDRRPN
0601: GRNEVMSRKQ KSSSQLMTES SSRRQQLPRD NNGMLKHKNS TSPRLPQKKL DMERRSRLPV PSPEANKNQR QSVDKSHLDT VSPRSKVRRK LAQGEDGHQN
0701: VAKSRTRSLN QQGDDMSLMS DGSMSVVSEL DIEVTSADRS AEVNASSFQQ GNQTPLGRNP QKVKTFYDAN KDLSSMDHAA AIPERPSPVS VLDYSFDQEN
0801: FFRTGKTSNS PNVDDQRHPS DAKPTKPTAQ SENNKLANVA SLLQKLQQLT VSKDDDEAPP VDHIAFLCET QIPDHRYVSE ILLASGLLMK DLGTGLSQIQ
0901: LHASGYPINP DLFLVLEQRK SGWTSKPEGF HQSRRSDDPK RAHRKLMFDA VNMLLLDKFE KKTSVHAASS LTGAREVSSG QQLVKAICSE IEYLKTERSR
1001: MCQEKSSSVI PDAEILHRLE GWTTSFGQQQ LPGMILEIER SIFKELVDEV VRGEAADGPQ ARAGRRGRRR LFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.