Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G261000.1 | Wheat | cytosol | 67.31 | 68.31 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 66.02 | 67.45 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 66.39 | 67.32 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 66.12 | 66.91 |
| EER98557 | Sorghum | nucleus | 62.63 | 62.92 |
| Zm00001d019700_P006 | Maize | nucleus | 60.51 | 61.88 |
| Zm00001d005297_P006 | Maize | nucleus | 59.23 | 58.64 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 34.53 | 38.49 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 33.88 | 33.58 |
| CDY42438 | Canola | nucleus | 28.74 | 33.26 |
| KRH63201 | Soybean | nucleus | 32.6 | 32.24 |
| CDY49132 | Canola | nucleus | 27.18 | 32.21 |
| KRH54713 | Soybean | nucleus | 32.6 | 32.16 |
| Solyc03g115000.2.1 | Tomato | nucleus | 32.14 | 32.05 |
| PGSC0003DMT400063076 | Potato | nucleus | 32.05 | 31.96 |
| Bra008136.1-P | Field mustard | nucleus | 28.93 | 31.37 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.1 | 31.26 |
| CDY43253 | Canola | nucleus | 23.78 | 31.13 |
| CDX81888 | Canola | nucleus | 23.78 | 31.13 |
| AT1G74160.1 | Thale cress | nucleus | 29.02 | 30.83 |
| CDX96710 | Canola | nucleus | 24.61 | 30.59 |
| CDX83829 | Canola | cytosol | 23.05 | 30.57 |
| CDX91979 | Canola | nucleus | 23.88 | 30.41 |
| CDY60473 | Canola | nucleus | 23.05 | 30.39 |
| KRH56796 | Soybean | nucleus | 29.29 | 30.35 |
| Bra031037.1-P | Field mustard | nucleus | 23.23 | 30.3 |
| CDY59655 | Canola | nucleus | 23.23 | 30.3 |
| KRH03155 | Soybean | nucleus | 29.2 | 30.29 |
| Bra039160.1-P | Field mustard | nucleus | 22.77 | 30.24 |
| CDX85545 | Canola | nucleus | 22.22 | 30.14 |
| CDX74270 | Canola | nucleus | 23.32 | 29.64 |
| Bra001034.1-P | Field mustard | nucleus | 23.32 | 29.64 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.93 | 29.58 |
| Os03t0418700-02 | Rice | nucleus | 25.07 | 29.48 |
| Bra023526.1-P | Field mustard | nucleus | 22.77 | 29.14 |
| Bra008689.1-P | Field mustard | nucleus | 23.88 | 29.02 |
| CDX69516 | Canola | nucleus | 23.88 | 29.02 |
| Os07t0603300-01 | Rice | nucleus | 24.98 | 28.94 |
| AT5G15580.1 | Thale cress | nucleus | 24.24 | 28.48 |
| AT3G02170.1 | Thale cress | nucleus | 23.32 | 28.07 |
| CDY26440 | Canola | nucleus | 22.86 | 27.88 |
| KRG93656 | Soybean | nucleus | 24.98 | 27.53 |
| CDX90985 | Canola | nucleus | 21.49 | 27.43 |
| KRH01314 | Soybean | nucleus | 24.24 | 27.1 |
| AT1G18620.2 | Thale cress | nucleus | 24.98 | 26.82 |
| KRH45061 | Soybean | nucleus | 23.97 | 26.82 |
| KRH18379 | Soybean | nucleus | 24.15 | 26.7 |
| PGSC0003DMT400003717 | Potato | nucleus | 22.86 | 26.35 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.35 | 24.25 |
Protein Annotations
| MapMan:13.4.1.2.2 | EntrezGene:4342218 | ProteinID:BAC79558.1 | ProteinID:BAD30640.1 | ProteinID:BAF20637.1 | ProteinID:BAS99741.1 |
| ncoils:Coil | InterPro:DUF3741-assoc | InterPro:DUF4378 | ProteinID:EAZ38445.1 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:LNG1/2 |
| EnsemblPlantsGene:Os07g0109400 | EnsemblPlants:Os07t0109400-01 | PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 |
| UniProt:Q7XIU5 | UniParc:UPI00001B394B | RefSeq:XP_015646820.1 | SEG:seg | : | : |
Description
Conserved hypothetical protein. (Os07t0109400-01)
Coordinates
chr7:+:515866..521916
Molecular Weight (calculated)
121729.0 Da
IEP (calculated)
9.231
GRAVY (calculated)
-0.914
Length
1089 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLQMLG EERRPELHRQ QAGCVTGILQ AFDRRYPLAA HHSHNRLLPP AHALSSSPSV GEERTRYSSQ IVLDKNMSKS WIDNQRAPLT VELSQGSYSS
0101: SSCSSSSSLD GNRSGQQDLS STDRMLFPEK PFKSSPKLKS SSDSDCGVDY YLDDALAKLS AQPSYPTLGI RNLVKDSIYR DTRDFSIRTF TKEAEKDHLF
0201: NCGDPPRILN EPPNSAIQEK NKGTMDIDES LRVLAKLRNP SESVQQPRLS YDAPRFSCEG RESASKLREV PRLSLDIKES PLRNREIDVR PKPSMTDEDR
0301: RSSISKDYSP PLETQQEHNA CKRLPSVVAK LMGLEDLPEH KDNTAISSQV SKSVTERSEE PTMLRPLSLS SQNEATPRQQ RNLDATIKNV PNSKFPVETA
0401: PWKQQEKIVL PRKLPKGSKG AHGKEQHAAS VYSEIEKRLK DLDFQQSNKD LRALKQILDS MQAKGLLQNK KREEPSMPKI YDGDHDNGDV TDVNLRLNST
0501: SNTKQAPEGT PSFTTEEDST TERSFKSPIV IMKPAKSADL LSDVTEDSAV GPLGGLSELP QLRTANSADK RKSSKKVTRE AVEQHTKSSS RAPTPQHLAS
0601: FDKRANGRNE EISRKQKSTS QLMTENSARR QQMQRENNGS LLKHKNSTSP RVQQKKPDSE RRARPPIPSP DSSKNQRQSV ERSHLDSVSP RSKFRRKPAQ
0701: AQGEDFHQNG VSRRTRSLNQ EGNDMSARSD GSISVASELD VEVTSTDRSA EVNILRSQHG TQTPSGRNPQ KVKTSYDANK DLPSMDPAAT ITERPSPVSV
0801: LDSSFDQEEF FHTSKTTNSS NVDDEHHPSP SEESCKPSEK KSTELPTQPK NSKLANIASL LKKLQQLSVN KDEAPPVDHI AFLCETPSPD HRYVSEILLA
0901: SGLLMKDLGS GLSQMQLHTS GYPINPDLFF VLEQRKSGWT SKPEGIHQSR STTKPDDPKR AHRKLMFEAV NELLLDKFEK ETTLITGVAA RDPVMSSGQQ
1001: LVKMICSGIE CLKTERSRMC QEDSSVIPDA EILNRLEGWS PSFIRRELPG MVLEIERSIF KELVDEVVRG ESADGQPAKA GRRRRRLFA
0101: SSCSSSSSLD GNRSGQQDLS STDRMLFPEK PFKSSPKLKS SSDSDCGVDY YLDDALAKLS AQPSYPTLGI RNLVKDSIYR DTRDFSIRTF TKEAEKDHLF
0201: NCGDPPRILN EPPNSAIQEK NKGTMDIDES LRVLAKLRNP SESVQQPRLS YDAPRFSCEG RESASKLREV PRLSLDIKES PLRNREIDVR PKPSMTDEDR
0301: RSSISKDYSP PLETQQEHNA CKRLPSVVAK LMGLEDLPEH KDNTAISSQV SKSVTERSEE PTMLRPLSLS SQNEATPRQQ RNLDATIKNV PNSKFPVETA
0401: PWKQQEKIVL PRKLPKGSKG AHGKEQHAAS VYSEIEKRLK DLDFQQSNKD LRALKQILDS MQAKGLLQNK KREEPSMPKI YDGDHDNGDV TDVNLRLNST
0501: SNTKQAPEGT PSFTTEEDST TERSFKSPIV IMKPAKSADL LSDVTEDSAV GPLGGLSELP QLRTANSADK RKSSKKVTRE AVEQHTKSSS RAPTPQHLAS
0601: FDKRANGRNE EISRKQKSTS QLMTENSARR QQMQRENNGS LLKHKNSTSP RVQQKKPDSE RRARPPIPSP DSSKNQRQSV ERSHLDSVSP RSKFRRKPAQ
0701: AQGEDFHQNG VSRRTRSLNQ EGNDMSARSD GSISVASELD VEVTSTDRSA EVNILRSQHG TQTPSGRNPQ KVKTSYDANK DLPSMDPAAT ITERPSPVSV
0801: LDSSFDQEEF FHTSKTTNSS NVDDEHHPSP SEESCKPSEK KSTELPTQPK NSKLANIASL LKKLQQLSVN KDEAPPVDHI AFLCETPSPD HRYVSEILLA
0901: SGLLMKDLGS GLSQMQLHTS GYPINPDLFF VLEQRKSGWT SKPEGIHQSR STTKPDDPKR AHRKLMFEAV NELLLDKFEK ETTLITGVAA RDPVMSSGQQ
1001: LVKMICSGIE CLKTERSRMC QEDSSVIPDA EILNRLEGWS PSFIRRELPG MVLEIERSIF KELVDEVVRG ESADGQPAKA GRRRRRLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.