Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G261000.1 | Wheat | cytosol | 96.19 | 96.46 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 92.94 | 93.81 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 92.94 | 93.11 |
| Os07t0109400-01 | Rice | nucleus | 66.91 | 66.12 |
| EER98557 | Sorghum | nucleus | 63.38 | 62.92 |
| Zm00001d019700_P006 | Maize | nucleus | 61.06 | 61.69 |
| Zm00001d005297_P006 | Maize | nucleus | 59.2 | 57.91 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 33.27 | 36.64 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.42 | 36.62 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 35.13 | 34.39 |
| CDY42438 | Canola | nucleus | 29.37 | 33.58 |
| CDY49132 | Canola | nucleus | 28.35 | 33.19 |
| Solyc03g115000.2.1 | Tomato | nucleus | 33.27 | 32.78 |
| PGSC0003DMT400063076 | Potato | nucleus | 33.27 | 32.78 |
| KRH63201 | Soybean | nucleus | 33.36 | 32.61 |
| KRH54713 | Soybean | nucleus | 33.27 | 32.43 |
| KRH56796 | Soybean | nucleus | 31.41 | 32.16 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 29.18 | 32.07 |
| KRH03155 | Soybean | nucleus | 31.04 | 31.81 |
| CDX83829 | Canola | cytosol | 24.26 | 31.79 |
| Bra008136.1-P | Field mustard | nucleus | 29.65 | 31.77 |
| CDX96710 | Canola | nucleus | 25.65 | 31.51 |
| CDX81888 | Canola | nucleus | 24.26 | 31.37 |
| AT1G74160.1 | Thale cress | nucleus | 29.46 | 30.93 |
| CDY59655 | Canola | nucleus | 23.88 | 30.78 |
| Bra031037.1-P | Field mustard | nucleus | 23.88 | 30.78 |
| CDY43253 | Canola | nucleus | 23.33 | 30.17 |
| CDX91979 | Canola | nucleus | 23.61 | 29.71 |
| CDX85545 | Canola | nucleus | 22.03 | 29.51 |
| CDY60473 | Canola | nucleus | 22.58 | 29.42 |
| Bra039160.1-P | Field mustard | nucleus | 22.3 | 29.27 |
| Bra008689.1-P | Field mustard | nucleus | 24.35 | 29.24 |
| CDX69516 | Canola | nucleus | 24.26 | 29.13 |
| AT5G15580.1 | Thale cress | nucleus | 25.09 | 29.13 |
| AT3G02170.1 | Thale cress | nucleus | 24.26 | 28.84 |
| CDX74270 | Canola | nucleus | 22.96 | 28.82 |
| Bra001034.1-P | Field mustard | nucleus | 22.86 | 28.7 |
| Bra023526.1-P | Field mustard | nucleus | 22.68 | 28.67 |
| CDX90985 | Canola | nucleus | 22.03 | 27.78 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 24.63 | 27.78 |
| CDY26440 | Canola | nucleus | 23.05 | 27.77 |
| KRH01314 | Soybean | nucleus | 24.91 | 27.52 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.79 | 27.09 |
| KRH45061 | Soybean | nucleus | 24.44 | 27.03 |
| AT1G18620.2 | Thale cress | nucleus | 25.46 | 27.02 |
| KRH18379 | Soybean | nucleus | 24.72 | 27.01 |
| KRG93656 | Soybean | nucleus | 24.35 | 26.52 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.26 | 23.84 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G262900.1 | EnsemblPlantsGene:TraesCS2D01G262900 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | PFAM:PF14309 | PFAM:PF14383 | SEG:seg |
| MapMan:13.4.1.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:320176180..320181939
Molecular Weight (calculated)
119853.0 Da
IEP (calculated)
9.276
GRAVY (calculated)
-0.875
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLEALG EDRRPDLHRQ IGCVTGILQA FDRRYPIAAH HSHKRLLPPG NALSSSPSVG EERTRYGPQI VLDKNFSKSW IENQRATSTM ETSSSSCSSF
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLVDTL TNTPSAQSSH PTLGIRNLVK DSIYRDTRDL SARTSTMEAA VADYTYNRGG
0201: GDPATCLDES PSSDIQGKSK GTMDINESLR VLAKLRESSW SPSESGHQPR LSYDAPRFSY DGRESASKHR EMPRLSLDIK EGPLRTREMD SRPKPNMDDT
0301: ERSTSFGSDK ESNAEIQKEQ PAASKRLPSV VAKLMGLEEL PEPSDNKVIS PQAPKSLQER KQEHILLPLS LSSHNEPARR QHRNLDATIR NVPNSKFPAE
0401: TAPWKQERIV LPRKLPKGSK GAHGKEQPAA SVYSEIEKRL NDLDFQHSNK DLRALKQILD SMQAKGLLQN KKREEASMIK LYDDDYNNQE VTDANPRLSC
0501: NTNSNQMSEG APSPSMEEES IADKFFKSPI VIMKPANSAD FSGDADSPVV PLRGLSDLPQ LRTVNSTDKR KMPKINRAAA EQRLKSSPTV PASQPLASDR
0601: RPNGRNEVTS RKQKSSSQLM TESSSRRQQL PRDNNGMLKH KNSTSPRLPQ KKLDMERRSR LPVPSPEANK NQRQSVDKSH LDTVSPRSKV RRKLAQGEDG
0701: HQNVAKSRTR SLNQQGDDMS LMSDGSMSVV SELDIEVTSA DRSAEVNASN FQQGNQTPLG RNPQKVKTSY DANKDLSSVD HAAAVPERPS PVSVLDYSFD
0801: QENLFRTSKT SDSPNVDDQR HLSDAKPTKP TAQSENNKLA NVASLLQKLQ QLTVTKDDDE APPVDHIAFL CETQIPDHRY VSEILLASGL LMKDLGTGLS
0901: QIQLHASGYP INPDLFLVLE QRKSGWTSKP EGVHQSRRSD DPKRAHRKLM FDAVNMLLLE KFEKETSVHA ASSLTGAREV SSGQQLVKAI CSEIEYLKTE
1001: RSRMCQEKSS SVIPDAEILH RLEGWTTSFG QQQLPGMILE IERSIFKELV DEVVRGEAAD GPQARAGRRG RRRLFT
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLVDTL TNTPSAQSSH PTLGIRNLVK DSIYRDTRDL SARTSTMEAA VADYTYNRGG
0201: GDPATCLDES PSSDIQGKSK GTMDINESLR VLAKLRESSW SPSESGHQPR LSYDAPRFSY DGRESASKHR EMPRLSLDIK EGPLRTREMD SRPKPNMDDT
0301: ERSTSFGSDK ESNAEIQKEQ PAASKRLPSV VAKLMGLEEL PEPSDNKVIS PQAPKSLQER KQEHILLPLS LSSHNEPARR QHRNLDATIR NVPNSKFPAE
0401: TAPWKQERIV LPRKLPKGSK GAHGKEQPAA SVYSEIEKRL NDLDFQHSNK DLRALKQILD SMQAKGLLQN KKREEASMIK LYDDDYNNQE VTDANPRLSC
0501: NTNSNQMSEG APSPSMEEES IADKFFKSPI VIMKPANSAD FSGDADSPVV PLRGLSDLPQ LRTVNSTDKR KMPKINRAAA EQRLKSSPTV PASQPLASDR
0601: RPNGRNEVTS RKQKSSSQLM TESSSRRQQL PRDNNGMLKH KNSTSPRLPQ KKLDMERRSR LPVPSPEANK NQRQSVDKSH LDTVSPRSKV RRKLAQGEDG
0701: HQNVAKSRTR SLNQQGDDMS LMSDGSMSVV SELDIEVTSA DRSAEVNASN FQQGNQTPLG RNPQKVKTSY DANKDLSSVD HAAAVPERPS PVSVLDYSFD
0801: QENLFRTSKT SDSPNVDDQR HLSDAKPTKP TAQSENNKLA NVASLLQKLQ QLTVTKDDDE APPVDHIAFL CETQIPDHRY VSEILLASGL LMKDLGTGLS
0901: QIQLHASGYP INPDLFLVLE QRKSGWTSKP EGVHQSRRSD DPKRAHRKLM FDAVNMLLLE KFEKETSVHA ASSLTGAREV SSGQQLVKAI CSEIEYLKTE
1001: RSRMCQEKSS SVIPDAEILH RLEGWTTSFG QQQLPGMILE IERSIFKELV DEVVRGEAAD GPQARAGRRG RRRLFT
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.