Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019700_P006 | Maize | nucleus | 78.45 | 81.03 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 57.45 | 59.29 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 57.82 | 59.27 |
| Os07t0109400-01 | Rice | nucleus | 58.64 | 59.23 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 57.91 | 59.2 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 57.18 | 58.57 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 31.64 | 35.62 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 33.27 | 33.3 |
| CDY42438 | Canola | nucleus | 28.09 | 32.84 |
| CDY49132 | Canola | nucleus | 27.0 | 32.32 |
| KRH54713 | Soybean | nucleus | 32.0 | 31.88 |
| KRH63201 | Soybean | nucleus | 31.73 | 31.7 |
| PGSC0003DMT400063076 | Potato | nucleus | 31.36 | 31.59 |
| Solyc03g115000.2.1 | Tomato | nucleus | 31.27 | 31.5 |
| Bra008136.1-P | Field mustard | nucleus | 28.64 | 31.37 |
| KRH56796 | Soybean | nucleus | 29.82 | 31.21 |
| Bra031037.1-P | Field mustard | nucleus | 23.64 | 31.14 |
| CDY59655 | Canola | nucleus | 23.64 | 31.14 |
| AT1G74160.1 | Thale cress | nucleus | 29.0 | 31.12 |
| CDX83829 | Canola | cytosol | 23.09 | 30.94 |
| CDX81888 | Canola | nucleus | 23.36 | 30.89 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 27.0 | 30.34 |
| CDX96710 | Canola | nucleus | 24.09 | 30.25 |
| KRH03155 | Soybean | nucleus | 28.82 | 30.19 |
| CDY43253 | Canola | nucleus | 22.09 | 29.21 |
| Bra039160.1-P | Field mustard | nucleus | 21.73 | 29.15 |
| CDX85545 | Canola | nucleus | 21.18 | 29.02 |
| CDY60473 | Canola | nucleus | 21.73 | 28.93 |
| CDX91979 | Canola | nucleus | 22.45 | 28.89 |
| Zm00001d006828_P001 | Maize | nucleus | 24.64 | 28.38 |
| Bra023526.1-P | Field mustard | nucleus | 21.82 | 28.2 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 24.36 | 28.18 |
| Bra008689.1-P | Field mustard | nucleus | 22.91 | 28.12 |
| Bra001034.1-P | Field mustard | nucleus | 21.82 | 28.0 |
| CDX74270 | Canola | nucleus | 21.73 | 27.89 |
| KRH45061 | Soybean | nucleus | 24.64 | 27.85 |
| AT3G02170.1 | Thale cress | nucleus | 22.91 | 27.85 |
| CDX69516 | Canola | nucleus | 22.64 | 27.79 |
| AT5G15580.1 | Thale cress | nucleus | 23.36 | 27.72 |
| KRH01314 | Soybean | nucleus | 24.09 | 27.21 |
| CDY26440 | Canola | nucleus | 21.82 | 26.88 |
| AT1G18620.2 | Thale cress | nucleus | 24.73 | 26.82 |
| KRH18379 | Soybean | nucleus | 23.64 | 26.4 |
| KRG93656 | Soybean | nucleus | 23.45 | 26.11 |
| PGSC0003DMT400003717 | Potato | nucleus | 22.27 | 25.93 |
| CDX90985 | Canola | nucleus | 20.09 | 25.91 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.64 | 25.35 |
| Solyc02g089050.2.1 | Tomato | nucleus | 15.55 | 23.3 |
Protein Annotations
| EnsemblPlants:Zm00001d005297_P006 | EnsemblPlants:Zm00001d005297_T006 | EnsemblPlantsGene:Zm00001d005297 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 |
| InterPro:LNG1/2 | ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | PFAM:PF14309 | PFAM:PF14383 |
| ProteinID:ONM20778.1 | SEG:seg | UniParc:UPI0008446662 | UniProt:A0A1D6ELK9 | MapMan:13.4.1.2.2 | : |
Description
Protein LONGIFOLIA 2
Coordinates
chr2:+:168256604..168265310
Molecular Weight (calculated)
121384.0 Da
IEP (calculated)
8.714
GRAVY (calculated)
-0.789
Length
1100 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLGPGA LAEDRRQDLH RQVGCVTGIL QAFDRRHPLA SSSHKRLLPP TGPASSLSAF SSLASIDNDS LLAAGHAVSS NPSKEGDCTR YSPQIVLENS
0101: SKTWADSQRA PATELSQTSY SSSPSSSFSS VDDNKSTQQD LSSTDRMLFP ERPFKSSPKL KSYFDSDTGL DYPDDAPTKS KDMPIVQSSL PTLGIRNLVK
0201: DSIYMDSREL SVRICTKEVT DHPSNCGDQP RELNGPPRDS TQEKSKGLVD INESLRVLAK LREASWTPAE SVHHARLSYD APRFSYDGKE AASKLREVPR
0301: LSLDIKESHL RNGEIDSRLN PSLSSTDRSS NTVIGSNAAF EIQQKQPACK RLPSVVAKLM GLEELPEHNQ SIASSHACKT VQGSKQEAMF NPLSISSHNE
0401: HALRQQRNHD STVRNLPNSK FPVETAPWKQ QERIILPRKL PKGSKGAHGR EQPAASVISD IEKRLKDLDF RQSYKDLRAL KHILDSMQAK GLLENKNREE
0501: ISMPKLSDGN HNGQEIASVN MRVNSNTNNV CMPEESNAES SFKSPIVIMK PSKCANLFNE VDSSVFPLGG SSDPPQQQTS NSTYRRKAST RNRTAKEQHA
0601: KFSSKVPTSQ PLVSYDRRSY GRNDDSSNNQ KSSSLLVTES SSRRQQLPRD SSISMKKNKH STTPRLQQRK LGSERRARPP IPCAESNKSQ NQSGDRNNAE
0701: TVSPRSKFRR KLLCPQEGDD DMPSGLNNRT RSLNQHGNDM STRSDGSITV ASELDIISND RSTEVDIPNF DQGIGTPSGR NPQRVDVPSV DPSAGISERP
0801: SPVSVLDSSF DHEDLFPSSR NPNSLAVDDE RQTLGEPWKP SVTKPTEVGM QSKNNKLANV VSLLQKLQQL SVSKDEDAPP VDHMAFLCET ESPDHRYVSE
0901: ILLASGLLMK ELGSGQAGLQ LQLHSSGYPI NPDLFHVLEQ RKAGWASIPD GIHQSRSGAK SDPKRAHRKL VFDTANELLL QKFEKETTVY AVSSSTGAKD
1001: HPPAKALSGQ QLLKFVSSEI EGMGTERSST CQMEGGVIPD AEILQRLQGW TSFSRELPGM VLEIERSVFK ELVDEVVHGE SADGPEMKAA GRRRRRRLFA
0101: SKTWADSQRA PATELSQTSY SSSPSSSFSS VDDNKSTQQD LSSTDRMLFP ERPFKSSPKL KSYFDSDTGL DYPDDAPTKS KDMPIVQSSL PTLGIRNLVK
0201: DSIYMDSREL SVRICTKEVT DHPSNCGDQP RELNGPPRDS TQEKSKGLVD INESLRVLAK LREASWTPAE SVHHARLSYD APRFSYDGKE AASKLREVPR
0301: LSLDIKESHL RNGEIDSRLN PSLSSTDRSS NTVIGSNAAF EIQQKQPACK RLPSVVAKLM GLEELPEHNQ SIASSHACKT VQGSKQEAMF NPLSISSHNE
0401: HALRQQRNHD STVRNLPNSK FPVETAPWKQ QERIILPRKL PKGSKGAHGR EQPAASVISD IEKRLKDLDF RQSYKDLRAL KHILDSMQAK GLLENKNREE
0501: ISMPKLSDGN HNGQEIASVN MRVNSNTNNV CMPEESNAES SFKSPIVIMK PSKCANLFNE VDSSVFPLGG SSDPPQQQTS NSTYRRKAST RNRTAKEQHA
0601: KFSSKVPTSQ PLVSYDRRSY GRNDDSSNNQ KSSSLLVTES SSRRQQLPRD SSISMKKNKH STTPRLQQRK LGSERRARPP IPCAESNKSQ NQSGDRNNAE
0701: TVSPRSKFRR KLLCPQEGDD DMPSGLNNRT RSLNQHGNDM STRSDGSITV ASELDIISND RSTEVDIPNF DQGIGTPSGR NPQRVDVPSV DPSAGISERP
0801: SPVSVLDSSF DHEDLFPSSR NPNSLAVDDE RQTLGEPWKP SVTKPTEVGM QSKNNKLANV VSLLQKLQQL SVSKDEDAPP VDHMAFLCET ESPDHRYVSE
0901: ILLASGLLMK ELGSGQAGLQ LQLHSSGYPI NPDLFHVLEQ RKAGWASIPD GIHQSRSGAK SDPKRAHRKL VFDTANELLL QKFEKETTVY AVSSSTGAKD
1001: HPPAKALSGQ QLLKFVSSEI EGMGTERSST CQMEGGVIPD AEILQRLQGW TSFSRELPGM VLEIERSVFK ELVDEVVHGE SADGPEMKAA GRRRRRRLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.