Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G261000.1 | Wheat | cytosol | 94.41 | 94.5 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 93.11 | 92.94 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 90.97 | 91.65 |
| Os07t0109400-01 | Rice | nucleus | 67.32 | 66.39 |
| EER98557 | Sorghum | nucleus | 61.92 | 61.35 |
| Zm00001d019700_P006 | Maize | nucleus | 60.06 | 60.56 |
| Zm00001d005297_P006 | Maize | nucleus | 58.57 | 57.18 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 33.24 | 36.54 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 34.82 | 34.03 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.23 | 33.8 |
| CDY42438 | Canola | nucleus | 29.42 | 33.58 |
| CDY49132 | Canola | nucleus | 28.31 | 33.08 |
| Solyc03g115000.2.1 | Tomato | nucleus | 33.52 | 32.97 |
| PGSC0003DMT400063076 | Potato | nucleus | 33.43 | 32.88 |
| KRH63201 | Soybean | nucleus | 33.33 | 32.52 |
| KRH54713 | Soybean | nucleus | 33.33 | 32.43 |
| KRH56796 | Soybean | nucleus | 31.19 | 31.87 |
| Bra008136.1-P | Field mustard | nucleus | 29.7 | 31.77 |
| CDX83829 | Canola | cytosol | 24.12 | 31.55 |
| KRH03155 | Soybean | nucleus | 30.63 | 31.33 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.49 | 31.26 |
| CDX81888 | Canola | nucleus | 24.21 | 31.25 |
| CDX96710 | Canola | nucleus | 25.42 | 31.16 |
| AT1G74160.1 | Thale cress | nucleus | 29.42 | 30.83 |
| CDY59655 | Canola | nucleus | 23.65 | 30.42 |
| Bra031037.1-P | Field mustard | nucleus | 23.65 | 30.42 |
| CDY43253 | Canola | nucleus | 23.28 | 30.05 |
| CDX91979 | Canola | nucleus | 23.56 | 29.59 |
| CDY60473 | Canola | nucleus | 22.63 | 29.42 |
| Bra039160.1-P | Field mustard | nucleus | 22.35 | 29.27 |
| CDX85545 | Canola | nucleus | 21.79 | 29.14 |
| AT5G15580.1 | Thale cress | nucleus | 25.14 | 29.13 |
| Bra008689.1-P | Field mustard | nucleus | 24.21 | 29.02 |
| CDX74270 | Canola | nucleus | 23.09 | 28.94 |
| CDX69516 | Canola | nucleus | 24.12 | 28.91 |
| Bra001034.1-P | Field mustard | nucleus | 22.81 | 28.59 |
| Bra023526.1-P | Field mustard | nucleus | 22.53 | 28.44 |
| AT3G02170.1 | Thale cress | nucleus | 23.56 | 27.96 |
| CDY26440 | Canola | nucleus | 22.81 | 27.44 |
| CDX90985 | Canola | nucleus | 21.69 | 27.32 |
| KRH01314 | Soybean | nucleus | 24.67 | 27.21 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 24.12 | 27.12 |
| KRH18379 | Soybean | nucleus | 24.77 | 27.01 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.65 | 26.88 |
| AT1G18620.2 | Thale cress | nucleus | 25.14 | 26.63 |
| KRG93656 | Soybean | nucleus | 24.49 | 26.62 |
| KRH45061 | Soybean | nucleus | 24.12 | 26.62 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.29 | 23.84 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G063820.1 | EnsemblPlantsGene:HORVU2Hr1G063820 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | PFAM:PF14309 | PFAM:PF14383 | SEG:seg | UniParc:UPI000B4631EB |
| UniProt:A0A287I7H1 | MapMan:13.4.1.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:432370851..432381876
Molecular Weight (calculated)
120009.0 Da
IEP (calculated)
9.376
GRAVY (calculated)
-0.861
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLLALG EERRPDLHRQ IGCVTGILQA FDRRYPIAAQ HSHKRLLPPG NALSSSPSVG EERTRYGPQI VLDKNFSRSW IENQRASSTM ETSSSSCSSF
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYFLDDTL TNTPSAQSSH RTLGIRNLVK DSIYRDTRDL SARTSTTEAV ADHTYNRGDA
0201: ATCFDESPSS DIQAKSKGTM DINESLRVLA KLRESSWSPS EPGHQPRLSY DAPRFSYDGR ESASKRREMP RLSLDIKEGP LRTREMDSWP KPNMNDTERS
0301: ISFSSDKEYN AEIQKEQPAA SKRLPSVVAK LMGLEELPEP NDNKVTSPQA PISVQERKQE HILIPLSLSS HNEPARRQNR NLDATIRNVP NSKFPAETAP
0401: WKQERIVLPR KLPKGSKAAH GKEQPAASVY SEIEKRLNDL DFQHSNKDLR ALKQILDSMQ AKGLLQNKKR EEASMLKLYD DDYNSQEVTA DANPRLSCNT
0501: NSSQISERAP SPSMEEESIA EKFFKSPIVI MKPANSADFL GDTDSPVVPL RGLSDLPQLR TVNSTDKRKM PKISRATVEQ RLKSSPTVPA SQPLASDGRP
0601: NGRNEVTSRK QKSSSQLMTE SSSRRQQLPR DNNGMLKHKN STSPRLPQKK LDMERRSRLP IPSPESNKNQ RQSADKSHLD TISPRSKVRR KLAQGEDGHQ
0701: NVAKSRTRSL NQQGDDMSLR SDGSMSVVSE LDIEVTSADR SAEVDASSFQ QGNQTPPGRN PQKVKTSYDA NKDLSSMDHA ATIPERPSPV SVLDSSFDQE
0801: NIFHTSKTSN SPNVDDQRHP SDVKPTKLTT QSENNKLANV ASLLQKLQQL TVTKDDDEAP PVDHIAFLCE TQIPDHRYVS EILLASGLLM KDLGTGLSQI
0901: QLHASGYPIN PDLFLVLEQR KSGWTSKPEG VPQSRRSDDP KRAHRKLMFD AVNMLLLDMF EKETSVHAAS SLTGAREVSS GQQLVKAICS EIEYLKAERS
1001: RMCQEKSSTV IPDAEILHRL EGWTTSFVQQ QLPGMILEIE RSIFKELVDE VVRGEAADGP RARAGRRGRR RLFA
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYFLDDTL TNTPSAQSSH RTLGIRNLVK DSIYRDTRDL SARTSTTEAV ADHTYNRGDA
0201: ATCFDESPSS DIQAKSKGTM DINESLRVLA KLRESSWSPS EPGHQPRLSY DAPRFSYDGR ESASKRREMP RLSLDIKEGP LRTREMDSWP KPNMNDTERS
0301: ISFSSDKEYN AEIQKEQPAA SKRLPSVVAK LMGLEELPEP NDNKVTSPQA PISVQERKQE HILIPLSLSS HNEPARRQNR NLDATIRNVP NSKFPAETAP
0401: WKQERIVLPR KLPKGSKAAH GKEQPAASVY SEIEKRLNDL DFQHSNKDLR ALKQILDSMQ AKGLLQNKKR EEASMLKLYD DDYNSQEVTA DANPRLSCNT
0501: NSSQISERAP SPSMEEESIA EKFFKSPIVI MKPANSADFL GDTDSPVVPL RGLSDLPQLR TVNSTDKRKM PKISRATVEQ RLKSSPTVPA SQPLASDGRP
0601: NGRNEVTSRK QKSSSQLMTE SSSRRQQLPR DNNGMLKHKN STSPRLPQKK LDMERRSRLP IPSPESNKNQ RQSADKSHLD TISPRSKVRR KLAQGEDGHQ
0701: NVAKSRTRSL NQQGDDMSLR SDGSMSVVSE LDIEVTSADR SAEVDASSFQ QGNQTPPGRN PQKVKTSYDA NKDLSSMDHA ATIPERPSPV SVLDSSFDQE
0801: NIFHTSKTSN SPNVDDQRHP SDVKPTKLTT QSENNKLANV ASLLQKLQQL TVTKDDDEAP PVDHIAFLCE TQIPDHRYVS EILLASGLLM KDLGTGLSQI
0901: QLHASGYPIN PDLFLVLEQR KSGWTSKPEG VPQSRRSDDP KRAHRKLMFD AVNMLLLDMF EKETSVHAAS SLTGAREVSS GQQLVKAICS EIEYLKAERS
1001: RMCQEKSSTV IPDAEILHRL EGWTTSFVQQ QLPGMILEIE RSIFKELVDE VVRGEAADGP RARAGRRGRR RLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.