Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83829 | Canola | cytosol | 78.31 | 83.56 |
| CDY59655 | Canola | nucleus | 58.56 | 61.44 |
| CDX81888 | Canola | nucleus | 55.37 | 58.29 |
| AT1G18620.2 | Thale cress | nucleus | 61.19 | 52.86 |
| CDY49132 | Canola | nucleus | 52.05 | 49.62 |
| CDY42438 | Canola | nucleus | 52.63 | 48.99 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 44.18 | 35.21 |
| KRH63201 | Soybean | nucleus | 43.95 | 34.97 |
| KRH54713 | Soybean | nucleus | 43.26 | 34.33 |
| KRH03155 | Soybean | nucleus | 39.84 | 33.24 |
| KRH56796 | Soybean | nucleus | 39.61 | 33.02 |
| Solyc03g115000.2.1 | Tomato | nucleus | 40.98 | 32.88 |
| PGSC0003DMT400063076 | Potato | nucleus | 40.3 | 32.33 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 31.74 | 28.45 |
| CDY60473 | Canola | nucleus | 26.14 | 27.72 |
| CDX91979 | Canola | nucleus | 26.83 | 27.49 |
| CDX85545 | Canola | nucleus | 25.0 | 27.27 |
| CDY43253 | Canola | nucleus | 25.68 | 27.04 |
| CDX74270 | Canola | nucleus | 25.91 | 26.49 |
| CDX69516 | Canola | nucleus | 27.05 | 26.45 |
| KXG36646 | Sorghum | nucleus | 28.08 | 25.65 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 31.51 | 25.65 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 31.16 | 25.61 |
| CDX90985 | Canola | nucleus | 24.77 | 25.44 |
| CDY26440 | Canola | nucleus | 25.91 | 25.42 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 31.16 | 25.42 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 31.05 | 25.35 |
| Zm00001d006828_P001 | Maize | nucleus | 27.63 | 25.34 |
| Os03t0418700-02 | Rice | nucleus | 26.71 | 25.27 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 27.4 | 25.16 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 27.17 | 25.03 |
| Os07t0603300-01 | Rice | nucleus | 26.83 | 25.0 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 27.17 | 24.92 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 25.68 | 24.83 |
| EER98557 | Sorghum | nucleus | 30.71 | 24.82 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 27.05 | 24.74 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 26.83 | 24.74 |
| Zm00001d019700_P006 | Maize | nucleus | 30.02 | 24.69 |
| Os07t0109400-01 | Rice | nucleus | 30.59 | 24.61 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 19.18 | 24.24 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 23.97 | 24.19 |
| Zm00001d005297_P006 | Maize | nucleus | 30.25 | 24.09 |
| KXG39125 | Sorghum | plastid | 22.95 | 22.02 |
Protein Annotations
| EnsemblPlants:CDX96710 | EnsemblPlantsGene:GSBRNA2T00102924001 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF3 | PFAM:PF14309 | PFAM:PF14383 | ProteinID:CDX96710 | ProteinID:CDX96710.1 |
| SEG:seg | UniParc:UPI0004EE66D9 | MapMan:13.4.1.2.2 | : | : | : |
Description
BnaA08g22530D
Coordinates
chrLK031895:-:674735..678345
Molecular Weight (calculated)
97715.4 Da
IEP (calculated)
9.264
GRAVY (calculated)
-0.757
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQLF DRHNHVRKSL ALGNAHVNSI NFERDSAFQF QDTNIINATS EKLTESSRVS FSSSCSSSSL LSSELNREET
101: QPEISPYDRV IFPESPTSDP VMSRGKGFAA HMGLDLRDVV RDSMYREVRA LSEVCRHKRR EEDSPRPYGL KHSTPVDFNE SCKALAKLRT TSQRCYNEVD
201: MKDASHNKLK SGKKVKESPK LSLDSRDHVD LKAGDSKLSR SSTMNKRPPS VVAKLMGLET LPGSPLGSPR SLGKGTASSS SSSPRWRSSE FVMKPLSSLR
301: FPTEPAPWKQ TDRRSLIKKK QACKPVSQSM ERRLKGVESN HPKKDLRALN EILEAMQTKS VFGSRKQPQC SNSRGLQNQV MPPSTMRGPI VIIKPARLVE
401: RSGIPSSSLI PIHSLSGLNR EEEESVHVKR NSSSKKAAKE LSISSGDSKS SSRNVRSSQV YKESTSPRLR HQVKKHENEK CSRPPTTLSD SSISRRQTNR
501: QAEGSTTNTP GGRRRPRAQR SLQQNNDQQC STETEATMII KQATEAGDGK SPTVVETAKT VVSNLMQNKS SPKLSEDGPS EHPSPVSVLN ASIYRDIKPS
601: PMKIQATEGT KTDHVTGGNG LIDLGDEHCE DEEQWNPAYS FSEATTTTIF SPEINRKKLQ NVEHLVQKLK RLNSSHDETS QDYIASLCEN NDPNTDNRYI
701: SEILLASGLL LRDLSSESTT FQLHPSGHPI NPELFLVLEQ TKGRSSSSSS NEKLNRKLVF DAVNETLVEK LPFKDPWMKR KVLSAQQLLK EVCSEIETVK
801: KQAEKRSGNL LLLEDQEEDF LKCILDEDIA TPSEKWTDFD DVVPGLVLHL ERLLFKDLVN EIVHGEIGRL QLVTDS
101: QPEISPYDRV IFPESPTSDP VMSRGKGFAA HMGLDLRDVV RDSMYREVRA LSEVCRHKRR EEDSPRPYGL KHSTPVDFNE SCKALAKLRT TSQRCYNEVD
201: MKDASHNKLK SGKKVKESPK LSLDSRDHVD LKAGDSKLSR SSTMNKRPPS VVAKLMGLET LPGSPLGSPR SLGKGTASSS SSSPRWRSSE FVMKPLSSLR
301: FPTEPAPWKQ TDRRSLIKKK QACKPVSQSM ERRLKGVESN HPKKDLRALN EILEAMQTKS VFGSRKQPQC SNSRGLQNQV MPPSTMRGPI VIIKPARLVE
401: RSGIPSSSLI PIHSLSGLNR EEEESVHVKR NSSSKKAAKE LSISSGDSKS SSRNVRSSQV YKESTSPRLR HQVKKHENEK CSRPPTTLSD SSISRRQTNR
501: QAEGSTTNTP GGRRRPRAQR SLQQNNDQQC STETEATMII KQATEAGDGK SPTVVETAKT VVSNLMQNKS SPKLSEDGPS EHPSPVSVLN ASIYRDIKPS
601: PMKIQATEGT KTDHVTGGNG LIDLGDEHCE DEEQWNPAYS FSEATTTTIF SPEINRKKLQ NVEHLVQKLK RLNSSHDETS QDYIASLCEN NDPNTDNRYI
701: SEILLASGLL LRDLSSESTT FQLHPSGHPI NPELFLVLEQ TKGRSSSSSS NEKLNRKLVF DAVNETLVEK LPFKDPWMKR KVLSAQQLLK EVCSEIETVK
801: KQAEKRSGNL LLLEDQEEDF LKCILDEDIA TPSEKWTDFD DVVPGLVLHL ERLLFKDLVN EIVHGEIGRL QLVTDS
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.