Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0603300-01 | Rice | nucleus | 50.76 | 50.0 |
| KXG39125 | Sorghum | plastid | 47.19 | 47.86 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.38 | 30.99 |
| CDY42438 | Canola | nucleus | 29.37 | 28.91 |
| CDY49132 | Canola | nucleus | 28.19 | 28.4 |
| CDY59655 | Canola | nucleus | 25.27 | 28.02 |
| Bra031037.1-P | Field mustard | nucleus | 25.27 | 28.02 |
| CDX81888 | Canola | nucleus | 25.16 | 28.0 |
| CDX83829 | Canola | cytosol | 24.51 | 27.65 |
| Bra008136.1-P | Field mustard | nucleus | 29.59 | 27.29 |
| CDX96710 | Canola | nucleus | 25.27 | 26.71 |
| CDY60473 | Canola | nucleus | 23.54 | 26.39 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 27.75 | 26.25 |
| Bra039160.1-P | Field mustard | nucleus | 23.22 | 26.22 |
| CDX91979 | Canola | nucleus | 24.08 | 26.08 |
| CDY43253 | Canola | nucleus | 23.43 | 26.08 |
| AT1G74160.1 | Thale cress | nucleus | 28.73 | 25.95 |
| CDX85545 | Canola | nucleus | 22.35 | 25.78 |
| Bra001034.1-P | Field mustard | nucleus | 23.43 | 25.32 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 30.02 | 25.3 |
| KRH18379 | Soybean | nucleus | 26.89 | 25.28 |
| KRH54713 | Soybean | nucleus | 30.13 | 25.27 |
| KRH63201 | Soybean | nucleus | 30.02 | 25.25 |
| Os07t0109400-01 | Rice | nucleus | 29.48 | 25.07 |
| CDX74270 | Canola | nucleus | 23.11 | 24.97 |
| Bra023526.1-P | Field mustard | nucleus | 22.89 | 24.91 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 24.3 | 24.83 |
| KRG93656 | Soybean | nucleus | 26.24 | 24.6 |
| CDX69516 | Canola | nucleus | 23.76 | 24.55 |
| Bra008689.1-P | Field mustard | nucleus | 23.65 | 24.44 |
| AT5G15580.1 | Thale cress | nucleus | 24.3 | 24.27 |
| Solyc03g115000.2.1 | Tomato | nucleus | 28.62 | 24.27 |
| CDX90985 | Canola | nucleus | 22.35 | 24.27 |
| PGSC0003DMT400063076 | Potato | nucleus | 28.51 | 24.18 |
| PGSC0003DMT400003717 | Potato | nucleus | 24.51 | 24.02 |
| AT1G18620.2 | Thale cress | nucleus | 26.24 | 23.96 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.82 | 23.81 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 22.14 | 23.62 |
| KRH03155 | Soybean | nucleus | 26.67 | 23.52 |
| KRH56796 | Soybean | nucleus | 26.67 | 23.5 |
| CDY26440 | Canola | nucleus | 22.57 | 23.4 |
| AT3G02170.1 | Thale cress | nucleus | 22.79 | 23.31 |
| KRH01314 | Soybean | nucleus | 24.51 | 23.31 |
| KRH45061 | Soybean | nucleus | 24.41 | 23.23 |
| Solyc02g089050.2.1 | Tomato | nucleus | 17.17 | 21.66 |
Protein Annotations
| EnsemblPlants:Os03t0418700-02 | EnsemblPlantsGene:Os03g0418700 | EntrezGene:4333124 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:ABF96645.1 | ProteinID:BAS84721.1 | RefSeq:XP_015632370.1 |
| SEG:seg | UniParc:UPI0000DB4A3A | UniProt:Q10JI7 | MapMan:13.4.1.2.2 | : | : |
Description
Conserved hypothetical protein. (Os03t0418700-01);Hypothetical conserved gene. (Os03t0418700-02)
Coordinates
chr3:+:17422176..17426743
Molecular Weight (calculated)
103487.0 Da
IEP (calculated)
9.966
GRAVY (calculated)
-0.815
Length
926 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSRMMQAFA QEASDFDRQM GCMAGMFQIF DRRRLLTARQ RGGARGTAPP GSHVLPNSNS NVSIQNPVAS NNTLDKTFSK SMTENSSLSM ESSRASSSSS
101: SCSSFSSTDI NRPIQQELSY INKERFAGKP PRSSQTKSVK CSKTEAKTKD PHTGFRDIVK ESINRETHGM TIKTSTKESR KGLHKDSPRP LLISKSTDGT
201: YVIGIDRSTG VPGYVHESSR PPRFSCDDRQ LLRSVEAQDS KKPSAKLKEL PRLSLDSRKE SMNPCSRLKN SGYIRTDDNL LDVLKHQESP SHQRASSVVA
301: KLMGLEGTTP DIHETARSPT PVHGTQIDQP SHCQRIKNQD HSVPVQKNHS PVLKTNPSPR IIPEAAPWRQ NERAVTGRAA EVKPRTASIY ADIQRRLRGL
401: ELSECNKELR ALRILSTLHK KDGPSQSDNN PELTAIQKKA SEQIVDSENF QSPIVIMKPA RCITKPDASD TLVAPLSRPK GIRRLRHEET SFTRKNENSD
501: SKRNHSPNES AHSSGEEPVN SARSPRLSSS LSPRLAQKKA DSERRSRPPV LPTSPGKKSK ETVSPRGRLR SRHSQTKSNS DNDNVLHIPE TKINLAKQID
601: VGVVDHPNPL NANSPYIHQS KIASTPNREE MPTILPADKK KIHPQENIPS PVSVLDATFY HEGSSPSLKR ISDSFKDGET HTSDESWNPT SLPDTPPSKA
701: SNDGNQIKAE NMKALIQKLE LLQMLSEEAL KTDDTFSSVA ANKDHQYLYE ILSASGILHN KLNFQMMPHQ LRPSSYPINP ELFLILEQAK PDEEKLHRRL
801: IFDLANELLA QQMDANHTVN SSVQFFQSKK LSGWQLFKDL CAEIDMIQSR SSMIRCSEEE DSRLAEDAMQ GMKEWKSSDS ERQGIVLAIE KSIFKDLIDE
901: IISGVDKGKV HLTQWKLRRQ LSFISI
101: SCSSFSSTDI NRPIQQELSY INKERFAGKP PRSSQTKSVK CSKTEAKTKD PHTGFRDIVK ESINRETHGM TIKTSTKESR KGLHKDSPRP LLISKSTDGT
201: YVIGIDRSTG VPGYVHESSR PPRFSCDDRQ LLRSVEAQDS KKPSAKLKEL PRLSLDSRKE SMNPCSRLKN SGYIRTDDNL LDVLKHQESP SHQRASSVVA
301: KLMGLEGTTP DIHETARSPT PVHGTQIDQP SHCQRIKNQD HSVPVQKNHS PVLKTNPSPR IIPEAAPWRQ NERAVTGRAA EVKPRTASIY ADIQRRLRGL
401: ELSECNKELR ALRILSTLHK KDGPSQSDNN PELTAIQKKA SEQIVDSENF QSPIVIMKPA RCITKPDASD TLVAPLSRPK GIRRLRHEET SFTRKNENSD
501: SKRNHSPNES AHSSGEEPVN SARSPRLSSS LSPRLAQKKA DSERRSRPPV LPTSPGKKSK ETVSPRGRLR SRHSQTKSNS DNDNVLHIPE TKINLAKQID
601: VGVVDHPNPL NANSPYIHQS KIASTPNREE MPTILPADKK KIHPQENIPS PVSVLDATFY HEGSSPSLKR ISDSFKDGET HTSDESWNPT SLPDTPPSKA
701: SNDGNQIKAE NMKALIQKLE LLQMLSEEAL KTDDTFSSVA ANKDHQYLYE ILSASGILHN KLNFQMMPHQ LRPSSYPINP ELFLILEQAK PDEEKLHRRL
801: IFDLANELLA QQMDANHTVN SSVQFFQSKK LSGWQLFKDL CAEIDMIQSR SSMIRCSEEE DSRLAEDAMQ GMKEWKSSDS ERQGIVLAIE KSIFKDLIDE
901: IISGVDKGKV HLTQWKLRRQ LSFISI
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.