Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18379 | Soybean | nucleus | 79.66 | 79.9 |
| KRH45061 | Soybean | nucleus | 51.42 | 52.21 |
| KRH01314 | Soybean | nucleus | 49.8 | 50.51 |
| Solyc02g089030.1.1 | Tomato | nucleus | 3.04 | 42.25 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 36.94 | 37.28 |
| CDY60473 | Canola | nucleus | 26.62 | 31.84 |
| Bra039160.1-P | Field mustard | nucleus | 26.01 | 31.34 |
| KRH54713 | Soybean | nucleus | 34.92 | 31.25 |
| CDX85545 | Canola | nucleus | 25.3 | 31.13 |
| KRH63201 | Soybean | nucleus | 34.31 | 30.79 |
| Bra023526.1-P | Field mustard | nucleus | 26.11 | 30.32 |
| CDY43253 | Canola | nucleus | 25.51 | 30.29 |
| KRH03155 | Soybean | nucleus | 32.19 | 30.29 |
| KRH56796 | Soybean | nucleus | 32.19 | 30.26 |
| CDX91979 | Canola | nucleus | 26.11 | 30.18 |
| AT5G15580.1 | Thale cress | nucleus | 28.14 | 29.99 |
| PGSC0003DMT400003717 | Potato | nucleus | 28.64 | 29.95 |
| Bra008689.1-P | Field mustard | nucleus | 27.13 | 29.91 |
| Bra001034.1-P | Field mustard | nucleus | 25.91 | 29.87 |
| CDX69516 | Canola | nucleus | 27.02 | 29.8 |
| CDX74270 | Canola | nucleus | 25.71 | 29.64 |
| CDX90985 | Canola | nucleus | 25.0 | 28.96 |
| CDY26440 | Canola | nucleus | 25.81 | 28.56 |
| Solyc02g089050.2.1 | Tomato | nucleus | 21.15 | 28.47 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 27.94 | 28.25 |
| AT3G02170.1 | Thale cress | nucleus | 25.61 | 27.96 |
| KXG36646 | Sorghum | nucleus | 26.42 | 27.22 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 26.11 | 27.16 |
| Os07t0603300-01 | Rice | nucleus | 25.71 | 27.02 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 26.01 | 26.94 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 25.81 | 26.7 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 25.71 | 26.51 |
| Zm00001d006828_P001 | Maize | nucleus | 25.61 | 26.49 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 25.4 | 26.39 |
| Os03t0418700-02 | Rice | nucleus | 24.6 | 26.24 |
| Os07t0109400-01 | Rice | nucleus | 27.53 | 24.98 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 26.82 | 24.86 |
| EER98557 | Sorghum | nucleus | 27.02 | 24.63 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 26.62 | 24.49 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 26.52 | 24.42 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 26.52 | 24.35 |
| KXG39125 | Sorghum | plastid | 22.06 | 23.88 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 16.7 | 23.81 |
| Zm00001d019700_P006 | Maize | nucleus | 25.61 | 23.76 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 21.66 | 23.62 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.75 | 23.62 |
| Zm00001d005297_P006 | Maize | nucleus | 26.11 | 23.45 |
Protein Annotations
| EMBL:ACUP02011605 | EnsemblPlants:KRG93656 | EnsemblPlantsGene:GLYMA_19G031100 | EntrezGene:102662105 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 |
| InterPro:LNG1/2 | ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:KRG93656 |
| ProteinID:KRG93656.1 | SEG:seg | UniParc:UPI0002955F9C | UniProt:K7MW93 | MapMan:13.4.1.2.2 | : |
Description
hypothetical protein
Coordinates
chr19:-:3839225..3845784
Molecular Weight (calculated)
109974.0 Da
IEP (calculated)
9.632
GRAVY (calculated)
-0.772
Length
988 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKVLTSMK DENPDLQKQI GCISGFFQLF DRHSFLTGQS NSSHNQNIPT NKGGISNRIK EVNNTTHKAT AKNVKLTREN QQFSTESSGT SVTSSSRSSS
101: MSSLEFNRTI QIEPPSISQM KIPENTNSEA AMKQGNQGHQ PLDFYDIVKD SMHRDVHGLS VKTVAKEERK GRILKYMDSP RPLEPSKSVN TGVTVAWDSP
201: RLSYDGRDTQ DTFKSATKPK ELPRLSLDSR QGSIKSFNEG TKSRILLKGS QKGYGSSRTM QLQEPETSRR PSGVVAKLMG LEAFPDCTET SDTPSQMSSC
301: TTNKNETIAG PSTNDEYKQH QSAASSQGTI KGSSLLQFRR DASILNVTPY SRFSLEPIPW RQPEASQGSQ LQDSKRSESS AKASNLTISV YGEIEKRIAD
401: LEFKNSGKDL RALKQILDAM QRYKESLDIP RDQVSNSLSD NRSSSSLSES SIVKSPRIRQ KDPTFTVVEM SNSTQGSKSP IFIMKPAKAA RKTNSPASTE
501: MSFQGKSSLG KFSSANCANG IMGGKLDGQT AKGIGPAIRH AKDSISQPLH SVDKSNKMRT SKLMQSSKVR QVINGENATN SSNTAEAKSP RLQKKFGLER
601: RSRPTSPSSD LSSNRRQHNR QSGELSSSST TPRQKFSEIS NQRRDFRHEV VVEVIHTVHS DRINGNSTQL KGMNQNNAAE ELSKESFMAE KTITAEQPSP
701: VSVLDASFYR EEPPSPVKKK SDMSKDLDDA LNTYDSSEEN SENLQLSSST AKAKFGSEIS DTDLRTQKLV RILQQIDYND ERFTNFRDDK DPNHKYISEI
801: LLASGLLSSQ SSSQVFHSSS YPINPNLFLA LEQIKTNMTC FNIECNAKKI AALNSPEQIQ RKLIFDVVND ILAQKIILES FTLWCQPNQP AGRKLRGQLL
901: LDELCTEIDK LQHKNTNANL NDEDENLTSL LWEELMHCPT IYTNSYSEIP NVVLDIERLI FKDLITEVVR SGLANHSGKH CRQLLFSK
101: MSSLEFNRTI QIEPPSISQM KIPENTNSEA AMKQGNQGHQ PLDFYDIVKD SMHRDVHGLS VKTVAKEERK GRILKYMDSP RPLEPSKSVN TGVTVAWDSP
201: RLSYDGRDTQ DTFKSATKPK ELPRLSLDSR QGSIKSFNEG TKSRILLKGS QKGYGSSRTM QLQEPETSRR PSGVVAKLMG LEAFPDCTET SDTPSQMSSC
301: TTNKNETIAG PSTNDEYKQH QSAASSQGTI KGSSLLQFRR DASILNVTPY SRFSLEPIPW RQPEASQGSQ LQDSKRSESS AKASNLTISV YGEIEKRIAD
401: LEFKNSGKDL RALKQILDAM QRYKESLDIP RDQVSNSLSD NRSSSSLSES SIVKSPRIRQ KDPTFTVVEM SNSTQGSKSP IFIMKPAKAA RKTNSPASTE
501: MSFQGKSSLG KFSSANCANG IMGGKLDGQT AKGIGPAIRH AKDSISQPLH SVDKSNKMRT SKLMQSSKVR QVINGENATN SSNTAEAKSP RLQKKFGLER
601: RSRPTSPSSD LSSNRRQHNR QSGELSSSST TPRQKFSEIS NQRRDFRHEV VVEVIHTVHS DRINGNSTQL KGMNQNNAAE ELSKESFMAE KTITAEQPSP
701: VSVLDASFYR EEPPSPVKKK SDMSKDLDDA LNTYDSSEEN SENLQLSSST AKAKFGSEIS DTDLRTQKLV RILQQIDYND ERFTNFRDDK DPNHKYISEI
801: LLASGLLSSQ SSSQVFHSSS YPINPNLFLA LEQIKTNMTC FNIECNAKKI AALNSPEQIQ RKLIFDVVND ILAQKIILES FTLWCQPNQP AGRKLRGQLL
901: LDELCTEIDK LQHKNTNANL NDEDENLTSL LWEELMHCPT IYTNSYSEIP NVVLDIERLI FKDLITEVVR SGLANHSGKH CRQLLFSK
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.