Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G183400.1 | Wheat | nucleus | 94.24 | 94.34 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 94.03 | 93.74 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 91.52 | 92.0 |
| Os07t0603300-01 | Rice | nucleus | 70.99 | 72.13 |
| KXG36646 | Sorghum | nucleus | 67.12 | 66.84 |
| Zm00001d006828_P001 | Maize | nucleus | 65.86 | 65.86 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 64.5 | 64.77 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.3 | 30.99 |
| CDX81888 | Canola | nucleus | 26.6 | 30.53 |
| Bra031037.1-P | Field mustard | nucleus | 26.6 | 30.42 |
| CDY59655 | Canola | nucleus | 26.6 | 30.42 |
| CDY42438 | Canola | nucleus | 29.63 | 30.07 |
| CDY49132 | Canola | nucleus | 28.59 | 29.71 |
| Bra008136.1-P | Field mustard | nucleus | 29.84 | 28.39 |
| CDX83829 | Canola | cytosol | 24.29 | 28.26 |
| Bra039160.1-P | Field mustard | nucleus | 24.19 | 28.17 |
| CDX85545 | Canola | nucleus | 23.66 | 28.14 |
| CDY43253 | Canola | nucleus | 24.5 | 28.12 |
| CDY60473 | Canola | nucleus | 23.98 | 27.72 |
| Bra023526.1-P | Field mustard | nucleus | 24.61 | 27.61 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 28.27 | 27.58 |
| CDX91979 | Canola | nucleus | 24.61 | 27.49 |
| AT1G74160.1 | Thale cress | nucleus | 29.32 | 27.32 |
| KRH54713 | Soybean | nucleus | 31.52 | 27.26 |
| KRH63201 | Soybean | nucleus | 31.41 | 27.25 |
| CDX69516 | Canola | nucleus | 25.55 | 27.23 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 31.31 | 27.21 |
| CDX96710 | Canola | nucleus | 24.92 | 27.17 |
| Bra008689.1-P | Field mustard | nucleus | 25.34 | 27.01 |
| Bra001034.1-P | Field mustard | nucleus | 23.98 | 26.72 |
| CDX74270 | Canola | nucleus | 23.87 | 26.6 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 25.03 | 26.38 |
| AT5G15580.1 | Thale cress | nucleus | 25.45 | 26.21 |
| CDX90985 | Canola | nucleus | 23.25 | 26.03 |
| Solyc03g115000.2.1 | Tomato | nucleus | 29.53 | 25.82 |
| KRG93656 | Soybean | nucleus | 26.7 | 25.81 |
| PGSC0003DMT400063076 | Potato | nucleus | 29.42 | 25.73 |
| KRH18379 | Soybean | nucleus | 26.39 | 25.58 |
| AT1G18620.2 | Thale cress | nucleus | 27.12 | 25.54 |
| CDY26440 | Canola | nucleus | 23.77 | 25.42 |
| AT3G02170.1 | Thale cress | nucleus | 24.08 | 25.41 |
| KRH56796 | Soybean | nucleus | 27.75 | 25.21 |
| KRH03155 | Soybean | nucleus | 27.64 | 25.14 |
| KRH01314 | Soybean | nucleus | 24.92 | 24.44 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 22.2 | 24.42 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.7 | 24.39 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.87 | 24.13 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 27.12 | 24.12 |
| KRH45061 | Soybean | nucleus | 24.29 | 23.84 |
| Solyc02g089050.2.1 | Tomato | nucleus | 17.07 | 22.21 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G032710.2 | EnsemblPlantsGene:HORVU2Hr1G032710 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 | ncoils:Coil |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | SEG:seg | UniParc:UPI000B47E00E | UniProt:A0A287HLY9 |
| MapMan:13.4.1.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:128266307..128272755
Molecular Weight (calculated)
104238.0 Da
IEP (calculated)
9.702
GRAVY (calculated)
-0.727
Length
955 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAARRVLNA LADDMPEFDR RQMGCMAGIF QIFDRQRMLT ARRXXXXXXX XXXXQQKRLP AGRTPPESSS NVPVQSSSTP KIILEKTLSK SMTENSSLSI
101: ESSRASCSSS SCSSFSSMDG SKSAQQELPY INEELFAQRP PKSSPNLKGA EMDTRTAQPN VGFRDIVKDS INRDSGGLTV TTLGNGARRN LQYKDSPRPL
201: LLSKSMDGTY VISIDRTTNA VPANVVESSR RFPEQSRFSC DDRRLLRPAE TQEAKKPSST RTKELPRLSL DSRKESLSPS SRLKSYSYRR TDDSLLDTLK
301: PQDSPGHRRS NSVIAKLMGL EEAPDAMGML IADSYEPARS PRTAAQATRS ERPSRSPRSA CQDACVSLPK NEPSALKTRP PPRILTEAAP WRQQERGVSV
401: TNNKASQCRD AEVRPRTASL YADIERTLGG LEFSECNKDF RALRILGALH AKDAKHQNND GDTASVASQS QEEDSAATSS RSFQSPIVVM KPARTTEKPG
501: VSVAPLAGLR GLRKLQSRDS SLTDKKEAST NEKIHSRVAR AQSKSDEPAS RATSPRPTGS SSPRLVQRKA ESERRSRPPV SPKSPSKKAN EAASPRGRTR
601: SKPSQVRSNR DNEVSQSPGR RISLAKLIDV SIMDCQSHLV ARSSFVDPKT PSQKSPSSIL GSDHKIHSLE NALSPVSVLD TSFYHKSISD SFKDGETHTS
701: DECWNSNSLP DTPQSKTSSE VSQIKPENLE ALIQKLEQLQ SMNDEAANSK DHQYIYEILL ASGLLHKELS FAAMPAQLSP SSCPINPELF LILEQTKPHF
801: ISAAQAVTGA KKSSDRNTEK LHRRIVFDLV NEIIAQKMNI YSSASGTAKL LRSRKLSGWR LFKELCTEVD RLLSESLAAK CSEEDEDENI PLSEDALYEM
901: KDWGSPEGEL QGMVLDIERS IFRDLIDEVI GGEATEKMQA GQWKLRRQLS FSSIN
101: ESSRASCSSS SCSSFSSMDG SKSAQQELPY INEELFAQRP PKSSPNLKGA EMDTRTAQPN VGFRDIVKDS INRDSGGLTV TTLGNGARRN LQYKDSPRPL
201: LLSKSMDGTY VISIDRTTNA VPANVVESSR RFPEQSRFSC DDRRLLRPAE TQEAKKPSST RTKELPRLSL DSRKESLSPS SRLKSYSYRR TDDSLLDTLK
301: PQDSPGHRRS NSVIAKLMGL EEAPDAMGML IADSYEPARS PRTAAQATRS ERPSRSPRSA CQDACVSLPK NEPSALKTRP PPRILTEAAP WRQQERGVSV
401: TNNKASQCRD AEVRPRTASL YADIERTLGG LEFSECNKDF RALRILGALH AKDAKHQNND GDTASVASQS QEEDSAATSS RSFQSPIVVM KPARTTEKPG
501: VSVAPLAGLR GLRKLQSRDS SLTDKKEAST NEKIHSRVAR AQSKSDEPAS RATSPRPTGS SSPRLVQRKA ESERRSRPPV SPKSPSKKAN EAASPRGRTR
601: SKPSQVRSNR DNEVSQSPGR RISLAKLIDV SIMDCQSHLV ARSSFVDPKT PSQKSPSSIL GSDHKIHSLE NALSPVSVLD TSFYHKSISD SFKDGETHTS
701: DECWNSNSLP DTPQSKTSSE VSQIKPENLE ALIQKLEQLQ SMNDEAANSK DHQYIYEILL ASGLLHKELS FAAMPAQLSP SSCPINPELF LILEQTKPHF
801: ISAAQAVTGA KKSSDRNTEK LHRRIVFDLV NEIIAQKMNI YSSASGTAKL LRSRKLSGWR LFKELCTEVD RLLSESLAAK CSEEDEDENI PLSEDALYEM
901: KDWGSPEGEL QGMVLDIERS IFRDLIDEVI GGEATEKMQA GQWKLRRQLS FSSIN
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.