Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93656 | Soybean | nucleus | 79.9 | 79.66 |
| KRH01314 | Soybean | nucleus | 52.89 | 53.49 |
| KRH45061 | Soybean | nucleus | 51.88 | 52.52 |
| Solyc02g089030.1.1 | Tomato | nucleus | 3.05 | 42.25 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 36.95 | 37.18 |
| CDX85545 | Canola | nucleus | 25.69 | 31.51 |
| KRH54713 | Soybean | nucleus | 34.92 | 31.16 |
| PGSC0003DMT400003717 | Potato | nucleus | 29.64 | 30.9 |
| Bra023526.1-P | Field mustard | nucleus | 26.6 | 30.79 |
| KRH63201 | Soybean | nucleus | 34.31 | 30.7 |
| CDX91979 | Canola | nucleus | 26.6 | 30.64 |
| CDX74270 | Canola | nucleus | 26.5 | 30.46 |
| Bra001034.1-P | Field mustard | nucleus | 26.5 | 30.46 |
| KRH56796 | Soybean | nucleus | 32.39 | 30.35 |
| CDY60473 | Canola | nucleus | 25.38 | 30.27 |
| Bra039160.1-P | Field mustard | nucleus | 25.18 | 30.24 |
| KRH03155 | Soybean | nucleus | 32.08 | 30.1 |
| CDY43253 | Canola | nucleus | 25.38 | 30.05 |
| Bra008689.1-P | Field mustard | nucleus | 27.11 | 29.8 |
| AT5G15580.1 | Thale cress | nucleus | 27.82 | 29.56 |
| CDX69516 | Canola | nucleus | 26.8 | 29.46 |
| CDX90985 | Canola | nucleus | 25.08 | 28.96 |
| Solyc02g089050.2.1 | Tomato | nucleus | 21.52 | 28.88 |
| CDY26440 | Canola | nucleus | 25.79 | 28.44 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 27.82 | 28.05 |
| AT3G02170.1 | Thale cress | nucleus | 25.58 | 27.85 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 26.09 | 27.05 |
| Os07t0603300-01 | Rice | nucleus | 25.69 | 26.91 |
| Os03t0418700-02 | Rice | nucleus | 25.28 | 26.89 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 25.99 | 26.83 |
| KXG36646 | Sorghum | nucleus | 26.09 | 26.8 |
| Zm00001d006828_P001 | Maize | nucleus | 25.79 | 26.6 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 25.79 | 26.51 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 25.58 | 26.39 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 24.77 | 25.66 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 27.01 | 24.95 |
| EER98557 | Sorghum | nucleus | 27.31 | 24.82 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 27.01 | 24.79 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 27.01 | 24.77 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 27.01 | 24.72 |
| KXG39125 | Sorghum | plastid | 22.44 | 24.21 |
| Os07t0109400-01 | Rice | nucleus | 26.7 | 24.15 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 16.95 | 24.1 |
| Zm00001d019700_P006 | Maize | nucleus | 25.79 | 23.85 |
| Zm00001d005297_P006 | Maize | nucleus | 26.4 | 23.64 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.51 | 23.27 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 21.22 | 23.07 |
Protein Annotations
| EMBL:ACUP02008065 | EnsemblPlants:KRH18379 | EnsemblPlantsGene:GLYMA_13G055700 | EntrezGene:100793602 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 |
| InterPro:LNG1/2 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:KRH18379 | ProteinID:KRH18379.1 |
| SEG:seg | UniParc:UPI000295087B | UniProt:K7LXM7 | MapMan:13.4.1.2.2 | : | : |
Description
hypothetical protein
Coordinates
chr13:+:15329124..15335648
Molecular Weight (calculated)
109813.0 Da
IEP (calculated)
9.582
GRAVY (calculated)
-0.822
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKVLTSMK DENPDLQKQI GCISGFLQLF DRHSFLTGQS NSSHNQNIPN NKGGISNHIK EVNNTTQKAT ANNVKVAREN QQFSTESSGT SMTSSSRSSS
101: MSSLEFNRTI QIEPPPINQM KIPENSNSGA AMKQGSQGHQ PLDFYDIVKE SMHRDVHGLS VKTVAKEEKK GRILKYIDSP RPLEPSKFVN TGVMVAWDSP
201: RLSYDGRDTQ DTFKSATKPK ELPRLSLDSR QGSIKSFNEG TKSRSLLKGP QKGYGSSSTM QLQEPETSRR PSSVVAKLMG LEAFPDCTET CDTPPRISSC
301: ATNKNETTAG PSTNDEYKQH QSAASSQRTI KGSTLLQFRR DASIMNMTPY SRFSLEPIPW RQPEASQGSQ LQNSKRSESS AKASKLSLSV YGEIEKRIAD
401: LEFKNSGKDL RALKQILDAM QRYKESLDIP RDQVSNSLSD NRSNSSLSES SIVKSPRLRQ KDPTSTTVEM SNSTQGSKSP IFIMKPAKAA RKTNSPASTE
501: MSFQGKSGPS KFSPANRTNG IMGDKLDRQT AKGIGPAITH ATDPISQPFH SVNKSNKKRT SKLMQSSKVR QVINGENATN SSNTAEAKSP RLQKKFGLER
601: RSPPTSPSSD LSSNRRQQNR QSVELSSPST TPRQKFSEIS NQRRDFKHEV DLEVIHIDHS DRINGNTIQL KGINQNNAAE ELSKESFMAE KTITAEQPSP
701: VSVLDASFYR EEPPSPVKKK SDISKDLDDA LNTYDSSEEN SEDLPLSSNT TKANFSSDTD LRTQNLVEIL QQIDNSDERF TNFRDNKDPD HRYISEILLA
801: SGLLSSPSSS QVFHSSSYPI NPKLFLALEQ IKTNKMCFNI EHNAKNITGL NSPEQMQRKL IFDVVNDILA QKIILESSTL WRQPNQQAGR KLSGQLLLDE
901: LCTEIDKLQH KNTNVNLADE NENLTSLLWE ELMHCPTIYT NSYSEIPNVV LDIERLIFKD LITEVVRSEL ANHSGKHCRQ LLLSK
101: MSSLEFNRTI QIEPPPINQM KIPENSNSGA AMKQGSQGHQ PLDFYDIVKE SMHRDVHGLS VKTVAKEEKK GRILKYIDSP RPLEPSKFVN TGVMVAWDSP
201: RLSYDGRDTQ DTFKSATKPK ELPRLSLDSR QGSIKSFNEG TKSRSLLKGP QKGYGSSSTM QLQEPETSRR PSSVVAKLMG LEAFPDCTET CDTPPRISSC
301: ATNKNETTAG PSTNDEYKQH QSAASSQRTI KGSTLLQFRR DASIMNMTPY SRFSLEPIPW RQPEASQGSQ LQNSKRSESS AKASKLSLSV YGEIEKRIAD
401: LEFKNSGKDL RALKQILDAM QRYKESLDIP RDQVSNSLSD NRSNSSLSES SIVKSPRLRQ KDPTSTTVEM SNSTQGSKSP IFIMKPAKAA RKTNSPASTE
501: MSFQGKSGPS KFSPANRTNG IMGDKLDRQT AKGIGPAITH ATDPISQPFH SVNKSNKKRT SKLMQSSKVR QVINGENATN SSNTAEAKSP RLQKKFGLER
601: RSPPTSPSSD LSSNRRQQNR QSVELSSPST TPRQKFSEIS NQRRDFKHEV DLEVIHIDHS DRINGNTIQL KGINQNNAAE ELSKESFMAE KTITAEQPSP
701: VSVLDASFYR EEPPSPVKKK SDISKDLDDA LNTYDSSEEN SEDLPLSSNT TKANFSSDTD LRTQNLVEIL QQIDNSDERF TNFRDNKDPD HRYISEILLA
801: SGLLSSPSSS QVFHSSSYPI NPKLFLALEQ IKTNKMCFNI EHNAKNITGL NSPEQMQRKL IFDVVNDILA QKIILESSTL WRQPNQQAGR KLSGQLLLDE
901: LCTEIDKLQH KNTNVNLADE NENLTSLLWE ELMHCPTIYT NSYSEIPNVV LDIERLIFKD LITEVVRSEL ANHSGKHCRQ LLLSK
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.