Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60473 | Canola | nucleus | 91.95 | 91.28 |
| Bra001034.1-P | Field mustard | nucleus | 67.32 | 64.41 |
| AT3G02170.1 | Thale cress | nucleus | 70.37 | 63.76 |
| Bra023526.1-P | Field mustard | nucleus | 52.32 | 50.41 |
| Bra008689.1-P | Field mustard | nucleus | 53.66 | 49.11 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 36.46 | 30.54 |
| Bra008136.1-P | Field mustard | nucleus | 33.17 | 27.09 |
| Bra031037.1-P | Field mustard | nucleus | 27.07 | 26.59 |
| PGSC0003DMT400003717 | Potato | nucleus | 30.49 | 26.45 |
| KRG93656 | Soybean | nucleus | 31.34 | 26.01 |
| KRH01314 | Soybean | nucleus | 30.85 | 25.98 |
| KRH45061 | Soybean | nucleus | 30.73 | 25.9 |
| Solyc02g089050.2.1 | Tomato | nucleus | 23.05 | 25.75 |
| KRH18379 | Soybean | nucleus | 30.24 | 25.18 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 28.41 | 24.32 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 28.29 | 24.32 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 28.05 | 24.21 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 28.17 | 24.19 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 28.78 | 24.16 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.07 | 23.94 |
| Os07t0603300-01 | Rice | nucleus | 26.95 | 23.51 |
| Zm00001d019700_P006 | Maize | nucleus | 30.37 | 23.38 |
| EER98557 | Sorghum | nucleus | 30.85 | 23.34 |
| Os03t0418700-02 | Rice | nucleus | 26.22 | 23.22 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 19.51 | 23.09 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 25.49 | 23.07 |
| KXG36646 | Sorghum | nucleus | 26.95 | 23.04 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 29.76 | 22.89 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 26.46 | 22.82 |
| Os07t0109400-01 | Rice | nucleus | 30.24 | 22.77 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 29.27 | 22.35 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 29.27 | 22.3 |
| Zm00001d006828_P001 | Maize | nucleus | 25.98 | 22.3 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 28.9 | 22.09 |
| KXG39125 | Sorghum | plastid | 24.51 | 22.02 |
| Zm00001d005297_P006 | Maize | nucleus | 29.15 | 21.73 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.61 | 19.47 |
Protein Annotations
| EnsemblPlants:Bra039160.1 | EnsemblPlants:Bra039160.1-P | EnsemblPlantsGene:Bra039160 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 |
| ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | SEG:seg | UniParc:UPI0002547651 |
| UniProt:M4FDI9 | MapMan:13.4.1.2.2 | : | : | : | : |
Description
AT3G02170 (E=3e-182) LNG2 | LNG2 (LONGIFOLIA2)
Coordinates
chrA05:+:23703289..23706102
Molecular Weight (calculated)
92425.4 Da
IEP (calculated)
9.889
GRAVY (calculated)
-0.880
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAKLQYNLS DENPNLNKQF GCMYGIFQVF HRQQYPARPV SSDVEKSLPP GERKEIVGEI NMESEETGKS TKKKKKSAVK EKHRVSSESS SRPSFSSSPR
101: SSSFSSTEVS TTASQFDQPG EKQIREQPNA RPMMPFDLKE LVKGSINREM RTRSEETAAF TQQQQPNSAR TSSNEWNEGS GRALKFKESH RLSYDEREMR
201: NNGYKTDSKL KETPRLSLDS RSSPPVSHRR SSSSVVAKLM GLEVIADNFE TEQRKENLFC DSPRPQPTAL QRSRSVGSIK KILPASSKFP MEPAPWKQMK
301: AGDAAPTVYG EIQKRLTQLE FNKAGKDLRA LKQILEAMEK TQKTHQPVPA ATSPAMNFKS TSIVVMKPAT PVSTSSLQQK AALPNVNVGN TRKPQKVTSG
401: KQNIDSTKST SPKPIRSRQT LVAKSGKSQQ QSVSPRMQPK KLGFERQSRP TTPKAEPGKI QRQLGSRQQR ESDSPRRKQG IKPRSSLQQP DDRLSDASSD
501: LRSLRSGSNI SLGSNGDIEV TSKHRLERNC DFAELHASKQ RNPDFGTKQD RPSLKPLKVT VEQPSPVSVL DAGFDEEDSP SPVRKISLSF KEDDALRSEE
601: SMWINKPTGV CRSILLPENK GPTQTDSDLL ECFPDEDANI KSGDHKYISE ILLASGLLKD LEYSKISIQL NQARLPINPG LFFFLEQNKA SNMTLIYNKH
701: RGREFRQQQT NLTEKIRRKL IFDTVNEILV QRFKGSANPV TTMEKKLEAE ELLQTLCSEI DRLQENKSKC IFEDDEEDII WEELQCQGMN LKEFEGENPG
801: IVLDIERMIF RDLVSEVCFC
101: SSSFSSTEVS TTASQFDQPG EKQIREQPNA RPMMPFDLKE LVKGSINREM RTRSEETAAF TQQQQPNSAR TSSNEWNEGS GRALKFKESH RLSYDEREMR
201: NNGYKTDSKL KETPRLSLDS RSSPPVSHRR SSSSVVAKLM GLEVIADNFE TEQRKENLFC DSPRPQPTAL QRSRSVGSIK KILPASSKFP MEPAPWKQMK
301: AGDAAPTVYG EIQKRLTQLE FNKAGKDLRA LKQILEAMEK TQKTHQPVPA ATSPAMNFKS TSIVVMKPAT PVSTSSLQQK AALPNVNVGN TRKPQKVTSG
401: KQNIDSTKST SPKPIRSRQT LVAKSGKSQQ QSVSPRMQPK KLGFERQSRP TTPKAEPGKI QRQLGSRQQR ESDSPRRKQG IKPRSSLQQP DDRLSDASSD
501: LRSLRSGSNI SLGSNGDIEV TSKHRLERNC DFAELHASKQ RNPDFGTKQD RPSLKPLKVT VEQPSPVSVL DAGFDEEDSP SPVRKISLSF KEDDALRSEE
601: SMWINKPTGV CRSILLPENK GPTQTDSDLL ECFPDEDANI KSGDHKYISE ILLASGLLKD LEYSKISIQL NQARLPINPG LFFFLEQNKA SNMTLIYNKH
701: RGREFRQQQT NLTEKIRRKL IFDTVNEILV QRFKGSANPV TTMEKKLEAE ELLQTLCSEI DRLQENKSKC IFEDDEEDII WEELQCQGMN LKEFEGENPG
801: IVLDIERMIF RDLVSEVCFC
001: MSAKLLYNLS DENPNLNKQF GCMNGIFQVF YRQHCPATPV TVSGGAEKSL PPGERRGSVG ETNMESDKET ERSSTKKKKS AAKEKHRVSF ESSSRPSFSS
101: SPRSSSFSSA EVSTTASQFD QPGENLIREQ PNGGLMMPYD LKELVKGSIN REIRTRGEEA SFTQQQQPIS ARSSMLLLKE SSLRSPCRSS NEWNEGRGAA
201: MKFKESHRLS YDEREMRNNG FRVGSKLKET PRLSLDSRSN SFRSPRADAA RSSCPEEPAT MTHRRSSSSV VAKLMGLEVI ADNSDTEQRR ENRFCDSPRP
301: MSRVEPTALQ RSRSVDSIKR IPASAASKFP MEPAPWKQMK AGDSALTVYG EIQKRLTQLE FKKSGKDLRA LKQILEAMEK TQQLIDESRD DGTLSTTTLM
401: QRTHKPVSAA TSPARNFKSS SIVVMKSAAP VSTSPLPQNV TLPNVKVGNS RQTRKVTSGK QNAMDLTPRP GLYKGQLDST KSNSPKTVRS RQALAADAGS
501: MTKSGRSQQH SVSPRTQPKK LGFEKQTRPT TPKSEPGKRQ LGRQQTEVAS PRRKQMIKPH STLQQPDDRL SDARSDLRSL RSDSNISLGS NVDIEVTSRH
601: RLERNCDFPE QHTPKQRSPD FGIKQDRPSL KPLKVTVEQP SPVSVLDAVF DEEDSPSPVR KISLSFKEED ALRSEESEWI NKPTSFCRSV PFPQSNRGPM
701: KPSSDHFECS PEEGADFKSG NHKYILEILL ASGILRDLEY SMISFQLHQT RLPINPGLFF ILEQNKASNV TLPDNKHRGR GFRQQQTNPT ETIRRKLVFD
801: TVNEILARKF TAEGCIKPRL IANPLKKLEK ISKEEQLLQT LCSEIDRLQQ NNSNCILEDD EEDIIWEDLQ SQSMNLKEFE GETPGIVLDI ERMIFRDLVN
901: EVCFC
101: SPRSSSFSSA EVSTTASQFD QPGENLIREQ PNGGLMMPYD LKELVKGSIN REIRTRGEEA SFTQQQQPIS ARSSMLLLKE SSLRSPCRSS NEWNEGRGAA
201: MKFKESHRLS YDEREMRNNG FRVGSKLKET PRLSLDSRSN SFRSPRADAA RSSCPEEPAT MTHRRSSSSV VAKLMGLEVI ADNSDTEQRR ENRFCDSPRP
301: MSRVEPTALQ RSRSVDSIKR IPASAASKFP MEPAPWKQMK AGDSALTVYG EIQKRLTQLE FKKSGKDLRA LKQILEAMEK TQQLIDESRD DGTLSTTTLM
401: QRTHKPVSAA TSPARNFKSS SIVVMKSAAP VSTSPLPQNV TLPNVKVGNS RQTRKVTSGK QNAMDLTPRP GLYKGQLDST KSNSPKTVRS RQALAADAGS
501: MTKSGRSQQH SVSPRTQPKK LGFEKQTRPT TPKSEPGKRQ LGRQQTEVAS PRRKQMIKPH STLQQPDDRL SDARSDLRSL RSDSNISLGS NVDIEVTSRH
601: RLERNCDFPE QHTPKQRSPD FGIKQDRPSL KPLKVTVEQP SPVSVLDAVF DEEDSPSPVR KISLSFKEED ALRSEESEWI NKPTSFCRSV PFPQSNRGPM
701: KPSSDHFECS PEEGADFKSG NHKYILEILL ASGILRDLEY SMISFQLHQT RLPINPGLFF ILEQNKASNV TLPDNKHRGR GFRQQQTNPT ETIRRKLVFD
801: TVNEILARKF TAEGCIKPRL IANPLKKLEK ISKEEQLLQT LCSEIDRLQQ NNSNCILEDD EEDIIWEDLQ SQSMNLKEFE GETPGIVLDI ERMIFRDLVN
901: EVCFC
Arabidopsis Description
LNG2Protein LONGIFOLIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S823]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.